RNA–Protein interactions for RNA: ENST00000571806.1

TSR1-202, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-202ENST00000571806 POTEIP0CG38 1075 aa20.42■□□□□ 0.86
TSR1-202ENST00000571806 POTEJP0CG39 1038 aa20.42■□□□□ 0.86
TSR1-202ENST00000571806 RIPK4P57078 832 aa20.42■□□□□ 0.86
TSR1-202ENST00000571806 SUSD4Q5VX71 490 aa20.42■□□□□ 0.86
TSR1-202ENST00000571806 TMX4Q9H1E5 349 aaPredicted RBP20.42■□□□□ 0.86
TSR1-202ENST00000571806 PASKQ96RG2 1323 aa20.42■□□□□ 0.86
TSR1-202ENST00000571806 ABCC12Q96J65 1359 aa20.42■□□□□ 0.86
TSR1-202ENST00000571806 HSPA1AP0DMV8 641 aaKnown RBP20.41■□□□□ 0.86
TSR1-202ENST00000571806 HSPA1BP0DMV9 641 aaKnown RBP20.41■□□□□ 0.86
TSR1-202ENST00000571806 GPTP24298 496 aa20.41■□□□□ 0.86
TSR1-202ENST00000571806 OLFM4Q6UX06 510 aa20.41■□□□□ 0.86
TSR1-202ENST00000571806 UBN2Q6ZU65 1347 aa20.41■□□□□ 0.86
TSR1-202ENST00000571806 ZNF541Q9H0D2 1346 aa20.41■□□□□ 0.86
TSR1-202ENST00000571806 EPHX2P34913 555 aa20.4■□□□□ 0.86
TSR1-202ENST00000571806 EIF6P56537 245 aaKnown RBP20.4■□□□□ 0.86
TSR1-202ENST00000571806 RNF123Q5XPI4 1314 aa20.4■□□□□ 0.86
TSR1-202ENST00000571806 SNED1Q8TER0 1413 aa20.4■□□□□ 0.86
TSR1-202ENST00000571806 NLRP3Q96P20 1036 aa20.4■□□□□ 0.86
TSR1-202ENST00000571806 VPS33BQ9H267 617 aa20.4■□□□□ 0.86
TSR1-202ENST00000571806 NTSR2O95665 410 aa20.39■□□□□ 0.85
TSR1-202ENST00000571806 EAPPQ56P03 285 aaPredicted RBP20.39■□□□□ 0.85
TSR1-202ENST00000571806 TNS4Q8IZW8 715 aa20.39■□□□□ 0.85
TSR1-202ENST00000571806 TMEM88BA6NKF7 163 aa20.38■□□□□ 0.85
TSR1-202ENST00000571806 ITGBL1O95965 494 aaPredicted RBP20.38■□□□□ 0.85
TSR1-202ENST00000571806 TMPOP42166 694 aaKnown RBP20.38■□□□□ 0.85
TSR1-202ENST00000571806 HSP90AB3PQ58FF7 597 aa20.38■□□□□ 0.85
TSR1-202ENST00000571806 SLC10A5Q5PT55 438 aa20.38■□□□□ 0.85
TSR1-202ENST00000571806 CLEC11AQ9Y240 323 aa20.38■□□□□ 0.85
TSR1-202ENST00000571806 CNTNAP1P78357 1384 aa20.37■□□□□ 0.85
TSR1-202ENST00000571806 PPEF1O14829 653 aaPredicted RBP20.37■□□□□ 0.85
TSR1-202ENST00000571806 EIF2S2P20042 333 aaKnown RBP20.37■□□□□ 0.85
TSR1-202ENST00000571806 PDIA6Q15084 440 aa20.37■□□□□ 0.85
TSR1-202ENST00000571806 LRP10Q7Z4F1 713 aa20.37■□□□□ 0.85
TSR1-202ENST00000571806 UTP14AQ9BVJ6 771 aaKnown RBP20.37■□□□□ 0.85
TSR1-202ENST00000571806 MKRN1Q9UHC7 482 aaKnown RBP20.37■□□□□ 0.85
TSR1-202ENST00000571806 LMOD1P29536 600 aaPredicted RBP20.36■□□□□ 0.85
TSR1-202ENST00000571806 CNTROBQ8N137 903 aa20.35■□□□□ 0.85
TSR1-202ENST00000571806 LARGE2Q8N3Y3 721 aa20.35■□□□□ 0.85
TSR1-202ENST00000571806 ADAMTSL1Q8N6G6 1762 aa20.35■□□□□ 0.85
TSR1-202ENST00000571806 SUPT20HQ8NEM7 779 aa20.34■□□□□ 0.85
TSR1-202ENST00000571806 ATP6V0A2Q9Y487 856 aa20.34■□□□□ 0.85
TSR1-202ENST00000571806 MYBBP1AQ9BQG0 1328 aaKnown RBP20.33■□□□□ 0.85
TSR1-202ENST00000571806 BBOX1O75936 387 aa20.33■□□□□ 0.85
TSR1-202ENST00000571806 GJA3Q9Y6H8 435 aa20.33■□□□□ 0.85
TSR1-202ENST00000571806 COPS6Q7L5N1 327 aa20.32■□□□□ 0.84
TSR1-202ENST00000571806 NIM1KQ8IY84 436 aa20.32■□□□□ 0.84
TSR1-202ENST00000571806 DDX21Q9NR30 783 aaKnown RBP eCLIP20.32■□□□□ 0.84
TSR1-202ENST00000571806 CHL1O00533 1208 aa20.31■□□□□ 0.84
TSR1-202ENST00000571806 HOXB7P09629 217 aa20.3■□□□□ 0.84
TSR1-202ENST00000571806 TCIRG1Q13488 830 aa20.3■□□□□ 0.84
TSR1-202ENST00000571806 PROSER3Q2NL68 480 aa20.3■□□□□ 0.84
TSR1-202ENST00000571806 MAP1SQ66K74 1059 aaPredicted RBP20.3■□□□□ 0.84
TSR1-202ENST00000571806 USP50Q70EL3 339 aaPredicted RBP20.3■□□□□ 0.84
TSR1-202ENST00000571806 NLRP10Q86W26 655 aa20.3■□□□□ 0.84
TSR1-202ENST00000571806 SP8Q8IXZ3 490 aa20.3■□□□□ 0.84
TSR1-202ENST00000571806 RUNDC1Q96C34 613 aa20.3■□□□□ 0.84
TSR1-202ENST00000571806 RTFDC1Q9BY42 306 aaPredicted RBP20.3■□□□□ 0.84
TSR1-202ENST00000571806 ANKRD36CQ5JPF3 1778 aa20.29■□□□□ 0.84
TSR1-202ENST00000571806 RASSF10A6NK89 507 aa20.29■□□□□ 0.84
TSR1-202ENST00000571806 TCERG1O14776 1098 aaKnown RBP20.29■□□□□ 0.84
TSR1-202ENST00000571806 PPIP5K2O43314 1243 aa20.29■□□□□ 0.84
TSR1-202ENST00000571806 AIMP1Q12904 312 aaKnown RBP20.29■□□□□ 0.84
TSR1-202ENST00000571806 WDR43Q15061 677 aaKnown RBP eCLIP20.29■□□□□ 0.84
TSR1-202ENST00000571806 C3orf67Q6ZVT6 689 aa20.29■□□□□ 0.84
TSR1-202ENST00000571806 TMC4Q7Z404 712 aa20.29■□□□□ 0.84
TSR1-202ENST00000571806 XAGE3Q8WTP9 111 aa20.29■□□□□ 0.84
TSR1-202ENST00000571806 AIDAQ96BJ3 306 aa20.29■□□□□ 0.84
TSR1-202ENST00000571806 ANXA1P04083 346 aa20.28■□□□□ 0.84
TSR1-202ENST00000571806 VEGFBP49765 207 aa20.28■□□□□ 0.84
TSR1-202ENST00000571806 SCNN1DP51172 638 aa20.28■□□□□ 0.84
TSR1-202ENST00000571806 NEUROD2Q15784 382 aa20.28■□□□□ 0.84
TSR1-202ENST00000571806 DEFB115Q30KQ5 88 aa20.28■□□□□ 0.84
TSR1-202ENST00000571806 DDX46Q7L014 1031 aaKnown RBP20.28■□□□□ 0.84
TSR1-202ENST00000571806 TRMT112Q9UI30 125 aaKnown RBP20.28■□□□□ 0.84
TSR1-202ENST00000571806 COL4A5P29400 1685 aa20.28■□□□□ 0.84
TSR1-202ENST00000571806 ABCC4O15439 1325 aa20.27■□□□□ 0.84
TSR1-202ENST00000571806 SH3TC1Q8TE82 1336 aa20.27■□□□□ 0.84
TSR1-202ENST00000571806 PRDM10Q9NQV6 1147 aa20.27■□□□□ 0.84
TSR1-202ENST00000571806 ZNRF3Q9ULT6 936 aa20.27■□□□□ 0.84
TSR1-202ENST00000571806 DDX10Q13206 875 aaKnown RBP20.26■□□□□ 0.83
TSR1-202ENST00000571806 AOC3Q16853 763 aa20.26■□□□□ 0.83
TSR1-202ENST00000571806 DPP8Q6V1X1 898 aaPredicted RBP20.26■□□□□ 0.83
TSR1-202ENST00000571806 MPNDQ8N594 471 aa20.26■□□□□ 0.83
TSR1-202ENST00000571806 NECTIN2Q92692 538 aa20.26■□□□□ 0.83
TSR1-202ENST00000571806 DBF4Q9UBU7 674 aaPredicted RBP20.26■□□□□ 0.83
TSR1-202ENST00000571806 EPS15P42566 896 aa20.25■□□□□ 0.83
TSR1-202ENST00000571806 CTCFP49711 727 aaPredicted RBP20.25■□□□□ 0.83
TSR1-202ENST00000571806 GRAPQ13588 217 aa20.25■□□□□ 0.83
TSR1-202ENST00000571806 CCDC146Q8IYE0 955 aa20.25■□□□□ 0.83
TSR1-202ENST00000571806 PLBD2Q8NHP8 589 aa20.25■□□□□ 0.83
TSR1-202ENST00000571806 GRAPLQ8TC17 118 aaPredicted RBP20.25■□□□□ 0.83
TSR1-202ENST00000571806 ADARB2Q9NS39 739 aaKnown RBP20.25■□□□□ 0.83
TSR1-202ENST00000571806 TRIM35Q9UPQ4 493 aa20.25■□□□□ 0.83
TSR1-202ENST00000571806 LAS1LQ9Y4W2 734 aaKnown RBP20.25■□□□□ 0.83
TSR1-202ENST00000571806 HCLS1P14317 486 aaPredicted RBP20.24■□□□□ 0.83
TSR1-202ENST00000571806 MAP2K1Q02750 393 aaPredicted RBP20.24■□□□□ 0.83
TSR1-202ENST00000571806 HDGFL1Q5TGJ6 251 aa20.24■□□□□ 0.83
TSR1-202ENST00000571806 ANKRD13DQ6ZTN6 518 aa20.24■□□□□ 0.83
TSR1-202ENST00000571806 CFAP44Q96MT7 982 aa20.24■□□□□ 0.83
TSR1-202ENST00000571806 GPRC5DQ9NZD1 345 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms