RNA–Protein interactions for RNA: ENST00000571186.5

CIITA-205, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 1,041 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-205ENST00000571186 PRDM10Q9NQV6 1147 aa18.95■□□□□ 0.62
CIITA-205ENST00000571186 MAP3K15Q6ZN16 1313 aa18.95■□□□□ 0.62
CIITA-205ENST00000571186 ADAMTSL1Q8N6G6 1762 aa18.94■□□□□ 0.62
CIITA-205ENST00000571186 MYL6BP14649 208 aa18.94■□□□□ 0.62
CIITA-205ENST00000571186 GPTP24298 496 aa18.94■□□□□ 0.62
CIITA-205ENST00000571186 DEFB115Q30KQ5 88 aa18.94■□□□□ 0.62
CIITA-205ENST00000571186 CRY2Q49AN0 593 aa18.94■□□□□ 0.62
CIITA-205ENST00000571186 CC2D2BQ6DHV5 1058 aa18.94■□□□□ 0.62
CIITA-205ENST00000571186 ABCC12Q96J65 1359 aa18.93■□□□□ 0.62
CIITA-205ENST00000571186 TCERG1O14776 1098 aaKnown RBP18.93■□□□□ 0.62
CIITA-205ENST00000571186 KDM3BQ7LBC6 1761 aa18.93■□□□□ 0.62
CIITA-205ENST00000571186 LMOD1P29536 600 aaPredicted RBP18.92■□□□□ 0.62
CIITA-205ENST00000571186 EIF4A1P60842 406 aaKnown RBP18.92■□□□□ 0.62
CIITA-205ENST00000571186 ZBTB3Q9H5J0 574 aa18.92■□□□□ 0.62
CIITA-205ENST00000571186 WBP1LQ9NX94 342 aa18.92■□□□□ 0.62
CIITA-205ENST00000571186 HOXA10P31260 410 aaPredicted RBP18.91■□□□□ 0.62
CIITA-205ENST00000571186 LBX1P52954 281 aa18.91■□□□□ 0.62
CIITA-205ENST00000571186 SUSD4Q5VX71 490 aa18.91■□□□□ 0.62
CIITA-205ENST00000571186 LARGE2Q8N3Y3 721 aa18.91■□□□□ 0.62
CIITA-205ENST00000571186 RBM17Q96I25 401 aaKnown RBP18.91■□□□□ 0.62
CIITA-205ENST00000571186 ABT1Q9ULW3 272 aaKnown RBP18.91■□□□□ 0.62
CIITA-205ENST00000571186 RASSF10A6NK89 507 aa18.9■□□□□ 0.62
CIITA-205ENST00000571186 GRIPAP1Q4V328 841 aa18.9■□□□□ 0.62
CIITA-205ENST00000571186 THUMPD2Q9BTF0 503 aaKnown RBP18.9■□□□□ 0.62
CIITA-205ENST00000571186 TRPM7Q96QT4 1865 aa18.9■□□□□ 0.62
CIITA-205ENST00000571186 EPS15P42566 896 aa18.89■□□□□ 0.61
CIITA-205ENST00000571186 CRAMP1Q96RY5 1269 aa18.89■□□□□ 0.61
CIITA-205ENST00000571186 UBN2Q6ZU65 1347 aa18.89■□□□□ 0.61
CIITA-205ENST00000571186 WDR33Q9C0J8 1336 aaKnown RBP18.89■□□□□ 0.61
CIITA-205ENST00000571186 SNED1Q8TER0 1413 aa18.89■□□□□ 0.61
CIITA-205ENST00000571186 COL4A5P29400 1685 aa18.89■□□□□ 0.61
CIITA-205ENST00000571186 PPEF1O14829 653 aaPredicted RBP18.88■□□□□ 0.61
CIITA-205ENST00000571186 NFE2L2Q16236 605 aa18.88■□□□□ 0.61
CIITA-205ENST00000571186 ZNF34Q8IZ26 560 aa18.88■□□□□ 0.61
CIITA-205ENST00000571186 DDX21Q9NR30 783 aaKnown RBP eCLIP18.88■□□□□ 0.61
CIITA-205ENST00000571186 MAP2K1Q02750 393 aaPredicted RBP18.87■□□□□ 0.61
CIITA-205ENST00000571186 LTBP1Q14766 1721 aa18.87■□□□□ 0.61
CIITA-205ENST00000571186 GIGYF2Q6Y7W6 1299 aaKnown RBP18.87■□□□□ 0.61
CIITA-205ENST00000571186 PPP1R42Q7Z4L9 355 aa18.87■□□□□ 0.61
CIITA-205ENST00000571186 PLEKHF1Q96S99 279 aa18.87■□□□□ 0.61
CIITA-205ENST00000571186 TMX4Q9H1E5 349 aaPredicted RBP18.87■□□□□ 0.61
CIITA-205ENST00000571186 IBTKQ9P2D0 1353 aaPredicted RBP18.86■□□□□ 0.61
CIITA-205ENST00000571186 NTSR2O95665 410 aa18.86■□□□□ 0.61
CIITA-205ENST00000571186 SCNN1DP51172 638 aa18.86■□□□□ 0.61
CIITA-205ENST00000571186 FMR1Q06787 632 aaKnown RBP eCLIP18.86■□□□□ 0.61
CIITA-205ENST00000571186 PAXIP1Q6ZW49 1069 aaPredicted RBP18.86■□□□□ 0.61
CIITA-205ENST00000571186 SLC51AQ86UW1 340 aa18.86■□□□□ 0.61
CIITA-205ENST00000571186 NIM1KQ8IY84 436 aa18.86■□□□□ 0.61
CIITA-205ENST00000571186 NLRP3Q96P20 1036 aa18.86■□□□□ 0.61
CIITA-205ENST00000571186 RIC1Q4ADV7 1423 aa18.85■□□□□ 0.61
CIITA-205ENST00000571186 PPIP5K2O43314 1243 aa18.85■□□□□ 0.61
CIITA-205ENST00000571186 HSPA8P11142 646 aaKnown RBP18.85■□□□□ 0.61
CIITA-205ENST00000571186 C3orf67Q6ZVT6 689 aa18.85■□□□□ 0.61
CIITA-205ENST00000571186 PNNQ9H307 717 aaKnown RBP18.85■□□□□ 0.61
CIITA-205ENST00000571186 MAPK8IP3Q9UPT6 1336 aa18.84■□□□□ 0.61
CIITA-205ENST00000571186 EIF2S2P20042 333 aaKnown RBP18.84■□□□□ 0.61
CIITA-205ENST00000571186 GRM1Q13255 1194 aa18.84■□□□□ 0.61
CIITA-205ENST00000571186 PARP10Q53GL7 1025 aa18.84■□□□□ 0.61
CIITA-205ENST00000571186 USP50Q70EL3 339 aaPredicted RBP18.84■□□□□ 0.61
CIITA-205ENST00000571186 AOC3Q16853 763 aa18.83■□□□□ 0.6
CIITA-205ENST00000571186 CAPNS2Q96L46 248 aa18.83■□□□□ 0.6
CIITA-205ENST00000571186 UTP14AQ9BVJ6 771 aaKnown RBP18.83■□□□□ 0.6
CIITA-205ENST00000571186 TSPYL4Q9UJ04 414 aa18.83■□□□□ 0.6
CIITA-205ENST00000571186 ERBB4Q15303 1308 aa18.82■□□□□ 0.6
CIITA-205ENST00000571186 TRAF5O00463 557 aa18.82■□□□□ 0.6
CIITA-205ENST00000571186 ECE1P42892 770 aa18.82■□□□□ 0.6
CIITA-205ENST00000571186 BEGAINQ9BUH8 593 aa18.82■□□□□ 0.6
CIITA-205ENST00000571186 ATP6V0A2Q9Y487 856 aa18.82■□□□□ 0.6
CIITA-205ENST00000571186 SLC10A5Q5PT55 438 aa18.81■□□□□ 0.6
CIITA-205ENST00000571186 CST9Q5W186 159 aa18.81■□□□□ 0.6
CIITA-205ENST00000571186 CYP4F22Q6NT55 531 aa18.81■□□□□ 0.6
CIITA-205ENST00000571186 GPR101Q96P66 508 aaPredicted RBP18.81■□□□□ 0.6
CIITA-205ENST00000571186 VPS33BQ9H267 617 aa18.81■□□□□ 0.6
CIITA-205ENST00000571186 TAF1P21675 1872 aa18.8■□□□□ 0.6
CIITA-205ENST00000571186 ANXA1P04083 346 aa18.8■□□□□ 0.6
CIITA-205ENST00000571186 SUPT20HQ8NEM7 779 aa18.8■□□□□ 0.6
CIITA-205ENST00000571186 ADARB2Q9NS39 739 aaKnown RBP18.8■□□□□ 0.6
CIITA-205ENST00000571186 GPRC5DQ9NZD1 345 aa18.8■□□□□ 0.6
CIITA-205ENST00000571186 LAMB2P55268 1798 aa18.8■□□□□ 0.6
CIITA-205ENST00000571186 CXCL9Q07325 125 aa18.79■□□□□ 0.6
CIITA-205ENST00000571186 PDIA6Q15084 440 aa18.79■□□□□ 0.6
CIITA-205ENST00000571186 ABHD8Q96I13 439 aa18.79■□□□□ 0.6
CIITA-205ENST00000571186 ZNRF3Q9ULT6 936 aa18.79■□□□□ 0.6
CIITA-205ENST00000571186 ABCC4O15439 1325 aa18.78■□□□□ 0.6
CIITA-205ENST00000571186 BBOX1O75936 387 aa18.78■□□□□ 0.6
CIITA-205ENST00000571186 HCLS1P14317 486 aaPredicted RBP18.78■□□□□ 0.6
CIITA-205ENST00000571186 RIPK4P57078 832 aa18.78■□□□□ 0.6
CIITA-205ENST00000571186 AIMP1Q12904 312 aaKnown RBP18.78■□□□□ 0.6
CIITA-205ENST00000571186 PROSER3Q2NL68 480 aa18.78■□□□□ 0.6
CIITA-205ENST00000571186 DPP8Q6V1X1 898 aaPredicted RBP18.78■□□□□ 0.6
CIITA-205ENST00000571186 LRP10Q7Z4F1 713 aa18.78■□□□□ 0.6
CIITA-205ENST00000571186 NECTIN2Q92692 538 aa18.78■□□□□ 0.6
CIITA-205ENST00000571186 ANKRD36CQ5JPF3 1778 aa18.78■□□□□ 0.6
CIITA-205ENST00000571186 ZNF316A6NFI3 1004 aaPredicted RBP18.77■□□□□ 0.6
CIITA-205ENST00000571186 GMPSP49915 693 aaPredicted RBP18.77■□□□□ 0.6
CIITA-205ENST00000571186 SP8Q8IXZ3 490 aa18.77■□□□□ 0.6
CIITA-205ENST00000571186 MPNDQ8N594 471 aa18.77■□□□□ 0.6
CIITA-205ENST00000571186 TLL2Q9Y6L7 1015 aa18.77■□□□□ 0.6
CIITA-205ENST00000571186 POLR2AP24928 1970 aaKnown RBP18.77■□□□□ 0.59
CIITA-205ENST00000571186 CASP8AP2Q9UKL3 1982 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms