RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 IBTKQ9P2D0 1353 aaPredicted RBP25.17■■□□□ 1.62
SCARF1-204ENST00000570902 RIC1Q4ADV7 1423 aa25.15■■□□□ 1.62
SCARF1-204ENST00000570902 HOXA10P31260 410 aaPredicted RBP25.15■■□□□ 1.62
SCARF1-204ENST00000570902 MAP1SQ66K74 1059 aaPredicted RBP25.15■■□□□ 1.62
SCARF1-204ENST00000570902 KDM3BQ7LBC6 1761 aa25.14■■□□□ 1.62
SCARF1-204ENST00000570902 RASSF10A6NK89 507 aa25.14■■□□□ 1.62
SCARF1-204ENST00000570902 LMOD1P29536 600 aaPredicted RBP25.14■■□□□ 1.62
SCARF1-204ENST00000570902 RRP7AQ9Y3A4 280 aaKnown RBP25.14■■□□□ 1.62
SCARF1-204ENST00000570902 NUP98P52948 1817 aa25.14■■□□□ 1.61
SCARF1-204ENST00000570902 DEFB115Q30KQ5 88 aa25.13■■□□□ 1.61
SCARF1-204ENST00000570902 WBP1LQ9NX94 342 aa25.13■■□□□ 1.61
SCARF1-204ENST00000570902 EIF4A1P60842 406 aaKnown RBP25.12■■□□□ 1.61
SCARF1-204ENST00000570902 TTLL7Q6ZT98 887 aa25.12■■□□□ 1.61
SCARF1-204ENST00000570902 RBM17Q96I25 401 aaKnown RBP25.12■■□□□ 1.61
SCARF1-204ENST00000570902 GJA3Q9Y6H8 435 aa25.12■■□□□ 1.61
SCARF1-204ENST00000570902 MYL6BP14649 208 aa25.11■■□□□ 1.61
SCARF1-204ENST00000570902 GPTP24298 496 aa25.11■■□□□ 1.61
SCARF1-204ENST00000570902 CRAMP1Q96RY5 1269 aa25.11■■□□□ 1.61
SCARF1-204ENST00000570902 UBN2Q6ZU65 1347 aa25.11■■□□□ 1.61
SCARF1-204ENST00000570902 LARGE2Q8N3Y3 721 aa25.1■■□□□ 1.61
SCARF1-204ENST00000570902 ZBTB3Q9H5J0 574 aa25.1■■□□□ 1.61
SCARF1-204ENST00000570902 ABT1Q9ULW3 272 aaKnown RBP25.1■■□□□ 1.61
SCARF1-204ENST00000570902 DLG5Q8TDM6 1919 aa25.1■■□□□ 1.61
SCARF1-204ENST00000570902 ERBB4Q15303 1308 aa25.1■■□□□ 1.61
SCARF1-204ENST00000570902 PPEF1O14829 653 aaPredicted RBP25.09■■□□□ 1.61
SCARF1-204ENST00000570902 SUSD4Q5VX71 490 aa25.09■■□□□ 1.61
SCARF1-204ENST00000570902 COL4A5P29400 1685 aa25.08■■□□□ 1.61
SCARF1-204ENST00000570902 MAP2K1Q02750 393 aaPredicted RBP25.08■■□□□ 1.61
SCARF1-204ENST00000570902 NFE2L2Q16236 605 aa25.08■■□□□ 1.61
SCARF1-204ENST00000570902 PPP1R42Q7Z4L9 355 aa25.08■■□□□ 1.61
SCARF1-204ENST00000570902 ZNF34Q8IZ26 560 aa25.08■■□□□ 1.61
SCARF1-204ENST00000570902 TMX4Q9H1E5 349 aaPredicted RBP25.08■■□□□ 1.61
SCARF1-204ENST00000570902 PNNQ9H307 717 aaKnown RBP25.08■■□□□ 1.61
SCARF1-204ENST00000570902 DDX21Q9NR30 783 aaKnown RBP eCLIP25.08■■□□□ 1.61
SCARF1-204ENST00000570902 WDR33Q9C0J8 1336 aaKnown RBP25.08■■□□□ 1.6
SCARF1-204ENST00000570902 LBX1P52954 281 aa25.07■■□□□ 1.6
SCARF1-204ENST00000570902 GIGYF2Q6Y7W6 1299 aaKnown RBP25.07■■□□□ 1.6
SCARF1-204ENST00000570902 PLEKHF1Q96S99 279 aa25.07■■□□□ 1.6
SCARF1-204ENST00000570902 NTSR2O95665 410 aa25.06■■□□□ 1.6
SCARF1-204ENST00000570902 SCNN1DP51172 638 aa25.06■■□□□ 1.6
SCARF1-204ENST00000570902 PARP10Q53GL7 1025 aa25.06■■□□□ 1.6
SCARF1-204ENST00000570902 USP50Q70EL3 339 aaPredicted RBP25.06■■□□□ 1.6
SCARF1-204ENST00000570902 NIM1KQ8IY84 436 aa25.06■■□□□ 1.6
SCARF1-204ENST00000570902 NLRP3Q96P20 1036 aa25.05■■□□□ 1.6
SCARF1-204ENST00000570902 VPS33BQ9H267 617 aa25.05■■□□□ 1.6
SCARF1-204ENST00000570902 LTBP1Q14766 1721 aa25.05■■□□□ 1.6
SCARF1-204ENST00000570902 MAPK8IP3Q9UPT6 1336 aa25.05■■□□□ 1.6
SCARF1-204ENST00000570902 EPS15P42566 896 aa25.04■■□□□ 1.6
SCARF1-204ENST00000570902 THUMPD2Q9BTF0 503 aaKnown RBP25.04■■□□□ 1.6
SCARF1-204ENST00000570902 TCERG1O14776 1098 aaKnown RBP25.03■■□□□ 1.6
SCARF1-204ENST00000570902 PPIP5K2O43314 1243 aa25.02■■□□□ 1.6
SCARF1-204ENST00000570902 HSPA8P11142 646 aaKnown RBP25.02■■□□□ 1.6
SCARF1-204ENST00000570902 ECE1P42892 770 aa25.02■■□□□ 1.6
SCARF1-204ENST00000570902 ATP6V0A2Q9Y487 856 aa25.02■■□□□ 1.6
SCARF1-204ENST00000570902 C3orf67Q6ZVT6 689 aa25.01■■□□□ 1.59
SCARF1-204ENST00000570902 SUPT20HQ8NEM7 779 aa25.01■■□□□ 1.59
SCARF1-204ENST00000570902 UTP14AQ9BVJ6 771 aaKnown RBP25.01■■□□□ 1.59
SCARF1-204ENST00000570902 TSPYL4Q9UJ04 414 aa25.01■■□□□ 1.59
SCARF1-204ENST00000570902 SLC10A5Q5PT55 438 aa25■■□□□ 1.59
SCARF1-204ENST00000570902 AOC3Q16853 763 aa24.99■■□□□ 1.59
SCARF1-204ENST00000570902 PAXIP1Q6ZW49 1069 aaPredicted RBP24.99■■□□□ 1.59
SCARF1-204ENST00000570902 CAPNS2Q96L46 248 aa24.99■■□□□ 1.59
SCARF1-204ENST00000570902 BEGAINQ9BUH8 593 aa24.99■■□□□ 1.59
SCARF1-204ENST00000570902 ADARB2Q9NS39 739 aaKnown RBP24.99■■□□□ 1.59
SCARF1-204ENST00000570902 THSD7BQ9C0I4 1608 aa24.98■■□□□ 1.59
SCARF1-204ENST00000570902 GPRC5DQ9NZD1 345 aa24.98■■□□□ 1.59
SCARF1-204ENST00000570902 ZNRF3Q9ULT6 936 aa24.98■■□□□ 1.59
SCARF1-204ENST00000570902 SLC51AQ86UW1 340 aa24.97■■□□□ 1.59
SCARF1-204ENST00000570902 RTFDC1Q9BY42 306 aaPredicted RBP24.97■■□□□ 1.59
SCARF1-204ENST00000570902 BABAM1Q9NWV8 329 aa24.97■■□□□ 1.59
SCARF1-204ENST00000570902 ABCC4O15439 1325 aa24.96■■□□□ 1.59
SCARF1-204ENST00000570902 BBOX1O75936 387 aa24.96■■□□□ 1.59
SCARF1-204ENST00000570902 EIF2S2P20042 333 aaKnown RBP24.96■■□□□ 1.59
SCARF1-204ENST00000570902 PDIA6Q15084 440 aa24.96■■□□□ 1.59
SCARF1-204ENST00000570902 HSP90AB3PQ58FF7 597 aa24.96■■□□□ 1.59
SCARF1-204ENST00000570902 CST9Q5W186 159 aa24.96■■□□□ 1.59
SCARF1-204ENST00000570902 LRP10Q7Z4F1 713 aa24.96■■□□□ 1.59
SCARF1-204ENST00000570902 GPR101Q96P66 508 aaPredicted RBP24.96■■□□□ 1.59
SCARF1-204ENST00000570902 TLL2Q9Y6L7 1015 aa24.96■■□□□ 1.59
SCARF1-204ENST00000570902 TRPM7Q96QT4 1865 aa24.96■■□□□ 1.59
SCARF1-204ENST00000570902 TRAF5O00463 557 aa24.95■■□□□ 1.58
SCARF1-204ENST00000570902 FMR1Q06787 632 aaKnown RBP eCLIP24.95■■□□□ 1.58
SCARF1-204ENST00000570902 CYP4F22Q6NT55 531 aa24.95■■□□□ 1.58
SCARF1-204ENST00000570902 DPP8Q6V1X1 898 aaPredicted RBP24.95■■□□□ 1.58
SCARF1-204ENST00000570902 ABHD8Q96I13 439 aa24.95■■□□□ 1.58
SCARF1-204ENST00000570902 CXCL9Q07325 125 aa24.94■■□□□ 1.58
SCARF1-204ENST00000570902 GRM1Q13255 1194 aa24.94■■□□□ 1.58
SCARF1-204ENST00000570902 SP8Q8IXZ3 490 aa24.94■■□□□ 1.58
SCARF1-204ENST00000570902 CDHR2Q9BYE9 1310 aa24.93■■□□□ 1.58
SCARF1-204ENST00000570902 MAP2K2P36507 400 aa24.92■■□□□ 1.58
SCARF1-204ENST00000570902 RIPK4P57078 832 aa24.92■■□□□ 1.58
SCARF1-204ENST00000570902 PROSER3Q2NL68 480 aa24.92■■□□□ 1.58
SCARF1-204ENST00000570902 MPNDQ8N594 471 aa24.92■■□□□ 1.58
SCARF1-204ENST00000570902 GMPSP49915 693 aaPredicted RBP24.91■■□□□ 1.58
SCARF1-204ENST00000570902 LMOD3Q0VAK6 560 aa24.91■■□□□ 1.58
SCARF1-204ENST00000570902 KIAA2012Q0VF49 1180 aa24.91■■□□□ 1.58
SCARF1-204ENST00000570902 TNIP1Q15025 636 aa24.91■■□□□ 1.58
SCARF1-204ENST00000570902 CIAPIN1Q6FI81 312 aa24.91■■□□□ 1.58
SCARF1-204ENST00000570902 DDX46Q7L014 1031 aaKnown RBP24.91■■□□□ 1.58
SCARF1-204ENST00000570902 ANXA1P04083 346 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms