RNA–Protein interactions for RNA: ENST00000570827.6

USP43-203, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 2

Gene USP43, Length 3,624 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-203ENST00000570827 KIAA1524Q8TCG1 905 aa11.72□□□□□ -0.53
USP43-203ENST00000570827 CFAP74Q9C0B2 1584 aa11.72□□□□□ -0.53
USP43-203ENST00000570827 MTMR6Q9Y217 621 aa11.72□□□□□ -0.53
USP43-203ENST00000570827 PTCD1O75127 700 aaKnown RBP11.72□□□□□ -0.53
USP43-203ENST00000570827 DNAAF4Q8WXU2 420 aa11.72□□□□□ -0.53
USP43-203ENST00000570827 USP44Q9H0E7 712 aa11.72□□□□□ -0.53
USP43-203ENST00000570827 SH2B1Q9NRF2 756 aaPredicted RBP11.72□□□□□ -0.53
USP43-203ENST00000570827 PRDM4Q9UKN5 801 aa11.72□□□□□ -0.53
USP43-203ENST00000570827 SETD1BQ9UPS6 1966 aaKnown RBP11.71□□□□□ -0.53
USP43-203ENST00000570827 SOS1Q07889 1333 aaPredicted RBP11.71□□□□□ -0.53
USP43-203ENST00000570827 PRAMEF22A3QJZ6 481 aa11.71□□□□□ -0.53
USP43-203ENST00000570827 ARID5BQ14865 1188 aa11.71□□□□□ -0.53
USP43-203ENST00000570827 EDC3Q96F86 508 aaKnown RBP11.71□□□□□ -0.53
USP43-203ENST00000570827 GTPBP4Q9BZE4 634 aaKnown RBP11.71□□□□□ -0.53
USP43-203ENST00000570827 BTBD11A6QL63 1104 aa11.71□□□□□ -0.54
USP43-203ENST00000570827 ATP5J2-PTCD1G3V325 749 aa11.71□□□□□ -0.54
USP43-203ENST00000570827 CHST3Q7LGC8 479 aa11.71□□□□□ -0.54
USP43-203ENST00000570827 GTF3C6Q969F1 213 aa11.71□□□□□ -0.54
USP43-203ENST00000570827 RAD50Q92878 1312 aa11.71□□□□□ -0.54
USP43-203ENST00000570827 PTCH1Q13635 1447 aa11.71□□□□□ -0.54
USP43-203ENST00000570827 JAK2O60674 1132 aa11.71□□□□□ -0.54
USP43-203ENST00000570827 GTF2F1P35269 517 aaKnown RBP eCLIP11.71□□□□□ -0.54
USP43-203ENST00000570827 NMIQ13287 307 aaPredicted RBP11.71□□□□□ -0.54
USP43-203ENST00000570827 BRF1Q92994 677 aa11.71□□□□□ -0.54
USP43-203ENST00000570827 SRCAPQ6ZRS2 3230 aa11.7□□□□□ -0.54
USP43-203ENST00000570827 NEXMIFQ5QGS0 1516 aa11.7□□□□□ -0.54
USP43-203ENST00000570827 PPLO60437 1756 aa11.7□□□□□ -0.54
USP43-203ENST00000570827 ATP2B1P20020 1258 aa11.7□□□□□ -0.54
USP43-203ENST00000570827 STK38Q15208 465 aa11.7□□□□□ -0.54
USP43-203ENST00000570827 KIF18AQ8NI77 898 aa11.7□□□□□ -0.54
USP43-203ENST00000570827 CPLX1O14810 134 aa11.7□□□□□ -0.54
USP43-203ENST00000570827 ELF2Q15723 593 aa11.7□□□□□ -0.54
USP43-203ENST00000570827 CREB3L3Q68CJ9 461 aa11.7□□□□□ -0.54
USP43-203ENST00000570827 CCAR1Q8IX12 1150 aaKnown RBP11.7□□□□□ -0.54
USP43-203ENST00000570827 ZBTB22O15209 634 aa11.69□□□□□ -0.54
USP43-203ENST00000570827 NR1I2O75469 434 aa11.69□□□□□ -0.54
USP43-203ENST00000570827 ZSCAN20P17040 1043 aaPredicted RBP11.69□□□□□ -0.54
USP43-203ENST00000570827 FSIP1Q8NA03 581 aa11.69□□□□□ -0.54
USP43-203ENST00000570827 CCDC66A2RUB6 948 aa11.69□□□□□ -0.54
USP43-203ENST00000570827 URI1O94763 535 aaPredicted RBP11.69□□□□□ -0.54
USP43-203ENST00000570827 POLR3DP05423 398 aaPredicted RBP11.69□□□□□ -0.54
USP43-203ENST00000570827 TMC6Q7Z403 805 aa11.69□□□□□ -0.54
USP43-203ENST00000570827 PLCD3Q8N3E9 789 aa11.69□□□□□ -0.54
USP43-203ENST00000570827 AOPEPQ8N6M6 819 aa11.69□□□□□ -0.54
USP43-203ENST00000570827 DDX19AQ9NUU7 478 aaKnown RBP11.69□□□□□ -0.54
USP43-203ENST00000570827 TPCN1Q9ULQ1 816 aa11.69□□□□□ -0.54
USP43-203ENST00000570827 FAM135BQ49AJ0 1406 aa11.69□□□□□ -0.54
USP43-203ENST00000570827 CCDC69A6NI79 296 aa11.69□□□□□ -0.54
USP43-203ENST00000570827 NEXNQ0ZGT2 675 aa11.69□□□□□ -0.54
USP43-203ENST00000570827 ORAI2Q96SN7 254 aa11.69□□□□□ -0.54
USP43-203ENST00000570827 KCNF1Q9H3M0 494 aa11.69□□□□□ -0.54
USP43-203ENST00000570827 ZSWIM4Q9H7M6 989 aa11.69□□□□□ -0.54
USP43-203ENST00000570827 STRN4Q9NRL3 753 aa11.69□□□□□ -0.54
USP43-203ENST00000570827 MAP3K2Q9Y2U5 619 aa11.69□□□□□ -0.54
USP43-203ENST00000570827 ZFYVE9O95405 1425 aa11.68□□□□□ -0.54
USP43-203ENST00000570827 ZSCAN25Q6NSZ9 544 aa11.68□□□□□ -0.54
USP43-203ENST00000570827 CEP57L1Q8IYX8 460 aa11.68□□□□□ -0.54
USP43-203ENST00000570827 TOMM22Q9NS69 142 aa11.68□□□□□ -0.54
USP43-203ENST00000570827 ZNF215Q9UL58 517 aaPredicted RBP11.68□□□□□ -0.54
USP43-203ENST00000570827 PIK3C2BO00750 1634 aa11.68□□□□□ -0.54
USP43-203ENST00000570827 SERPINC1P01008 464 aa11.68□□□□□ -0.54
USP43-203ENST00000570827 SMTNL1A8MU46 457 aa11.68□□□□□ -0.54
USP43-203ENST00000570827 AP5Z1O43299 807 aa11.68□□□□□ -0.54
USP43-203ENST00000570827 ZNF75DP51815 510 aa11.68□□□□□ -0.54
USP43-203ENST00000570827 ANKRD1Q15327 319 aa11.68□□□□□ -0.54
USP43-203ENST00000570827 SYNE3Q6ZMZ3 975 aa11.68□□□□□ -0.54
USP43-203ENST00000570827 CCDC129Q6ZRS4 1044 aa11.68□□□□□ -0.54
USP43-203ENST00000570827 CACTINQ8WUQ7 758 aaKnown RBP11.68□□□□□ -0.54
USP43-203ENST00000570827 OSBPL3Q9H4L5 887 aa11.68□□□□□ -0.54
USP43-203ENST00000570827 HYPKQ9NX55 129 aa11.68□□□□□ -0.54
USP43-203ENST00000570827 CFAP45Q9UL16 551 aa11.68□□□□□ -0.54
USP43-203ENST00000570827 KRT222Q8N1A0 295 aa11.67□□□□□ -0.54
USP43-203ENST00000570827 NAT10Q9H0A0 1025 aaKnown RBP11.67□□□□□ -0.54
USP43-203ENST00000570827 OGFRQ9NZT2 677 aa11.67□□□□□ -0.54
USP43-203ENST00000570827 MRVI1Q9Y6F6 885 aa11.67□□□□□ -0.54
USP43-203ENST00000570827 PIK3R4Q99570 1358 aa11.67□□□□□ -0.54
USP43-203ENST00000570827 RGS12O14924 1447 aa11.67□□□□□ -0.54
USP43-203ENST00000570827 MYO5BQ9ULV0 1848 aa11.67□□□□□ -0.54
USP43-203ENST00000570827 WASHC4Q2M389 1173 aa11.67□□□□□ -0.54
USP43-203ENST00000570827 SYT10Q6XYQ8 523 aa11.67□□□□□ -0.54
USP43-203ENST00000570827 DDX46Q7L014 1031 aaKnown RBP11.67□□□□□ -0.54
USP43-203ENST00000570827 UBXN4Q92575 508 aa11.67□□□□□ -0.54
USP43-203ENST00000570827 CHMP4AQ9BY43 222 aa11.67□□□□□ -0.54
USP43-203ENST00000570827 FTOQ9C0B1 505 aaKnown RBP eCLIP11.67□□□□□ -0.54
USP43-203ENST00000570827 LRRC7Q96NW7 1537 aa11.67□□□□□ -0.54
USP43-203ENST00000570827 SFPQP23246 707 aaKnown RBP eCLIP11.67□□□□□ -0.54
USP43-203ENST00000570827 PTPN21Q16825 1174 aa11.67□□□□□ -0.54
USP43-203ENST00000570827 LEO1Q8WVC0 666 aaPredicted RBP11.67□□□□□ -0.54
USP43-203ENST00000570827 SNW1Q13573 536 aaKnown RBP11.66□□□□□ -0.54
USP43-203ENST00000570827 VPS53Q5VIR6 699 aa11.66□□□□□ -0.54
USP43-203ENST00000570827 EVI5LQ96CN4 794 aa11.66□□□□□ -0.54
USP43-203ENST00000570827 LSG1Q9H089 658 aaKnown RBP11.66□□□□□ -0.54
USP43-203ENST00000570827 PAXBP1Q9Y5B6 917 aa11.66□□□□□ -0.54
USP43-203ENST00000570827 ZC3H13Q5T200 1668 aaKnown RBP11.66□□□□□ -0.54
USP43-203ENST00000570827 ADGRB2O60241 1585 aa11.66□□□□□ -0.54
USP43-203ENST00000570827 APPP05067 770 aa11.66□□□□□ -0.54
USP43-203ENST00000570827 TEX35Q5T0J7 233 aa11.66□□□□□ -0.54
USP43-203ENST00000570827 Q6ZUG5 572 aa11.66□□□□□ -0.54
USP43-203ENST00000570827 HDAC5Q9UQL6 1122 aa11.66□□□□□ -0.54
USP43-203ENST00000570827 NPHP3Q7Z494 1330 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms