RNA–Protein interactions for RNA: ENST00000570253.5

PKD1-240, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-240ENST00000570253 RIC1Q4ADV7 1423 aa27.75■■■□□ 2.03
PKD1-240ENST00000570253 ABCC12Q96J65 1359 aa27.74■■■□□ 2.03
PKD1-240ENST00000570253 PASKQ96RG2 1323 aa27.74■■■□□ 2.03
PKD1-240ENST00000570253 FZD9O00144 591 aa27.74■■■□□ 2.03
PKD1-240ENST00000570253 GPTP24298 496 aa27.74■■■□□ 2.03
PKD1-240ENST00000570253 PPP1R42Q7Z4L9 355 aa27.74■■■□□ 2.03
PKD1-240ENST00000570253 PLEKHF1Q96S99 279 aa27.74■■■□□ 2.03
PKD1-240ENST00000570253 CNTNAP1P78357 1384 aa27.73■■■□□ 2.03
PKD1-240ENST00000570253 LMOD1P29536 600 aaPredicted RBP27.73■■■□□ 2.03
PKD1-240ENST00000570253 TTLL7Q6ZT98 887 aa27.73■■■□□ 2.03
PKD1-240ENST00000570253 RNF123Q5XPI4 1314 aa27.72■■■□□ 2.03
PKD1-240ENST00000570253 AIDAQ96BJ3 306 aa27.72■■■□□ 2.03
PKD1-240ENST00000570253 TSPYL4Q9UJ04 414 aa27.72■■■□□ 2.03
PKD1-240ENST00000570253 PARP10Q53GL7 1025 aa27.71■■■□□ 2.03
PKD1-240ENST00000570253 THUMPD2Q9BTF0 503 aaKnown RBP27.71■■■□□ 2.03
PKD1-240ENST00000570253 HOXA10P31260 410 aaPredicted RBP27.7■■■□□ 2.02
PKD1-240ENST00000570253 GIGYF2Q6Y7W6 1299 aaKnown RBP27.7■■■□□ 2.02
PKD1-240ENST00000570253 LARGE2Q8N3Y3 721 aa27.7■■■□□ 2.02
PKD1-240ENST00000570253 GJA3Q9Y6H8 435 aa27.7■■■□□ 2.02
PKD1-240ENST00000570253 PPEF1O14829 653 aaPredicted RBP27.69■■■□□ 2.02
PKD1-240ENST00000570253 SUSD4Q5VX71 490 aa27.69■■■□□ 2.02
PKD1-240ENST00000570253 NLRP3Q96P20 1036 aa27.69■■■□□ 2.02
PKD1-240ENST00000570253 CRAMP1Q96RY5 1269 aa27.69■■■□□ 2.02
PKD1-240ENST00000570253 UBN2Q6ZU65 1347 aa27.68■■■□□ 2.02
PKD1-240ENST00000570253 LMOD3Q0VAK6 560 aa27.68■■■□□ 2.02
PKD1-240ENST00000570253 ITGBL1O95965 494 aaPredicted RBP27.67■■■□□ 2.02
PKD1-240ENST00000570253 ZNF34Q8IZ26 560 aa27.67■■■□□ 2.02
PKD1-240ENST00000570253 CNTROBQ8N137 903 aa27.67■■■□□ 2.02
PKD1-240ENST00000570253 EIF2S2P20042 333 aaKnown RBP27.66■■■□□ 2.02
PKD1-240ENST00000570253 NTSR2O95665 410 aa27.65■■■□□ 2.02
PKD1-240ENST00000570253 RIPK4P57078 832 aa27.65■■■□□ 2.02
PKD1-240ENST00000570253 NIM1KQ8IY84 436 aa27.65■■■□□ 2.02
PKD1-240ENST00000570253 BABAM1Q9NWV8 329 aa27.65■■■□□ 2.02
PKD1-240ENST00000570253 ADAMTSL1Q8N6G6 1762 aa27.64■■■□□ 2.02
PKD1-240ENST00000570253 TCERG1O14776 1098 aaKnown RBP27.64■■■□□ 2.02
PKD1-240ENST00000570253 HSP90AB3PQ58FF7 597 aa27.64■■■□□ 2.02
PKD1-240ENST00000570253 MAP1SQ66K74 1059 aaPredicted RBP27.64■■■□□ 2.02
PKD1-240ENST00000570253 UTP14AQ9BVJ6 771 aaKnown RBP27.64■■■□□ 2.02
PKD1-240ENST00000570253 SNED1Q8TER0 1413 aa27.64■■■□□ 2.02
PKD1-240ENST00000570253 CTCFP49711 727 aaPredicted RBP27.62■■■□□ 2.01
PKD1-240ENST00000570253 VEGFBP49765 207 aa27.62■■■□□ 2.01
PKD1-240ENST00000570253 DEFB115Q30KQ5 88 aa27.62■■■□□ 2.01
PKD1-240ENST00000570253 SUPT20HQ8NEM7 779 aa27.62■■■□□ 2.01
PKD1-240ENST00000570253 PPIP5K2O43314 1243 aa27.61■■■□□ 2.01
PKD1-240ENST00000570253 RALBP1Q15311 655 aa27.61■■■□□ 2.01
PKD1-240ENST00000570253 VPS33BQ9H267 617 aa27.61■■■□□ 2.01
PKD1-240ENST00000570253 ABT1Q9ULW3 272 aaKnown RBP27.61■■■□□ 2.01
PKD1-240ENST00000570253 FOXN1O15353 648 aa27.6■■■□□ 2.01
PKD1-240ENST00000570253 PRDM10Q9NQV6 1147 aa27.6■■■□□ 2.01
PKD1-240ENST00000570253 RASSF10A6NK89 507 aa27.58■■■□□ 2.01
PKD1-240ENST00000570253 USP50Q70EL3 339 aaPredicted RBP27.58■■■□□ 2.01
PKD1-240ENST00000570253 ATP6V0A2Q9Y487 856 aa27.58■■■□□ 2.01
PKD1-240ENST00000570253 SLC10A5Q5PT55 438 aa27.56■■■□□ 2
PKD1-240ENST00000570253 DDX21Q9NR30 783 aaKnown RBP eCLIP27.56■■■□□ 2
PKD1-240ENST00000570253 TMPOP42166 694 aaKnown RBP27.55■■■□□ 2
PKD1-240ENST00000570253 SCNN1DP51172 638 aa27.55■■■□□ 2
PKD1-240ENST00000570253 MAP2K1Q02750 393 aaPredicted RBP27.55■■■□□ 2
PKD1-240ENST00000570253 AIMP1Q12904 312 aaKnown RBP27.55■■■□□ 2
PKD1-240ENST00000570253 AOC3Q16853 763 aa27.55■■■□□ 2
PKD1-240ENST00000570253 PAXIP1Q6ZW49 1069 aaPredicted RBP27.55■■■□□ 2
PKD1-240ENST00000570253 ABCC4O15439 1325 aa27.54■■■□□ 2
PKD1-240ENST00000570253 BBOX1O75936 387 aa27.54■■■□□ 2
PKD1-240ENST00000570253 EPS15P42566 896 aa27.54■■■□□ 2
PKD1-240ENST00000570253 PDIA6Q15084 440 aa27.54■■■□□ 2
PKD1-240ENST00000570253 ANKRD36CQ5JPF3 1778 aa27.54■■■□□ 2
PKD1-240ENST00000570253 DPP8Q6V1X1 898 aaPredicted RBP27.54■■■□□ 2
PKD1-240ENST00000570253 DDX46Q7L014 1031 aaKnown RBP27.54■■■□□ 2
PKD1-240ENST00000570253 COPS6Q7L5N1 327 aa27.54■■■□□ 2
PKD1-240ENST00000570253 COL4A5P29400 1685 aa27.53■■■□□ 2
PKD1-240ENST00000570253 WDR33Q9C0J8 1336 aaKnown RBP27.53■■■□□ 2
PKD1-240ENST00000570253 ANXA1P04083 346 aa27.53■■■□□ 2
PKD1-240ENST00000570253 ECE1P42892 770 aa27.53■■■□□ 2
PKD1-240ENST00000570253 C3orf67Q6ZVT6 689 aa27.53■■■□□ 2
PKD1-240ENST00000570253 NECTIN2Q92692 538 aa27.53■■■□□ 2
PKD1-240ENST00000570253 WBP1LQ9NX94 342 aa27.53■■■□□ 2
PKD1-240ENST00000570253 TRMT112Q9UI30 125 aaKnown RBP27.53■■■□□ 2
PKD1-240ENST00000570253 LRP10Q7Z4F1 713 aa27.52■■■□□ 2
PKD1-240ENST00000570253 MPNDQ8N594 471 aa27.52■■■□□ 2
PKD1-240ENST00000570253 ADARB2Q9NS39 739 aaKnown RBP27.52■■■□□ 2
PKD1-240ENST00000570253 ZNRF3Q9ULT6 936 aa27.52■■■□□ 2
PKD1-240ENST00000570253 SH3TC1Q8TE82 1336 aa27.51■■□□□ 1.99
PKD1-240ENST00000570253 PROSER3Q2NL68 480 aa27.51■■□□□ 1.99
PKD1-240ENST00000570253 SP8Q8IXZ3 490 aa27.51■■□□□ 1.99
PKD1-240ENST00000570253 XAGE3Q8WTP9 111 aa27.51■■□□□ 1.99
PKD1-240ENST00000570253 BEGAINQ9BUH8 593 aa27.51■■□□□ 1.99
PKD1-240ENST00000570253 TCIRG1Q13488 830 aa27.5■■□□□ 1.99
PKD1-240ENST00000570253 NEUROD2Q15784 382 aa27.5■■□□□ 1.99
PKD1-240ENST00000570253 TMC4Q7Z404 712 aa27.5■■□□□ 1.99
PKD1-240ENST00000570253 NLRP10Q86W26 655 aa27.5■■□□□ 1.99
PKD1-240ENST00000570253 LTBP1Q14766 1721 aa27.5■■□□□ 1.99
PKD1-240ENST00000570253 WDR43Q15061 677 aaKnown RBP eCLIP27.49■■□□□ 1.99
PKD1-240ENST00000570253 BCL2L13Q9BXK5 485 aa27.49■■□□□ 1.99
PKD1-240ENST00000570253 RTFDC1Q9BY42 306 aaPredicted RBP27.49■■□□□ 1.99
PKD1-240ENST00000570253 GPRC5DQ9NZD1 345 aa27.49■■□□□ 1.99
PKD1-240ENST00000570253 LAS1LQ9Y4W2 734 aaKnown RBP27.49■■□□□ 1.99
PKD1-240ENST00000570253 HCLS1P14317 486 aaPredicted RBP27.48■■□□□ 1.99
PKD1-240ENST00000570253 LBX1P52954 281 aa27.48■■□□□ 1.99
PKD1-240ENST00000570253 GRAPQ13588 217 aa27.48■■□□□ 1.99
PKD1-240ENST00000570253 TNIP1Q15025 636 aa27.48■■□□□ 1.99
PKD1-240ENST00000570253 CIAPIN1Q6FI81 312 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 303.2 ms