RNA–Protein interactions for RNA: ENST00000569889.1

RBFOX1-218, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5

Gene RBFOX1, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-218ENST00000569889 TAF1DQ9H5J8 278 aaPredicted RBP16.15■□□□□ 0.18
RBFOX1-218ENST00000569889 C3orf67Q6ZVT6 689 aa16.14■□□□□ 0.17
RBFOX1-218ENST00000569889 PPP1R42Q7Z4L9 355 aa16.14■□□□□ 0.17
RBFOX1-218ENST00000569889 JDP2Q8WYK2 163 aa16.14■□□□□ 0.17
RBFOX1-218ENST00000569889 HACL1Q9UJ83 578 aa16.14■□□□□ 0.17
RBFOX1-218ENST00000569889 RNF123Q5XPI4 1314 aa16.14■□□□□ 0.17
RBFOX1-218ENST00000569889 RGL2O15211 777 aa16.13■□□□□ 0.17
RBFOX1-218ENST00000569889 HSPA1AP0DMV8 641 aaKnown RBP16.13■□□□□ 0.17
RBFOX1-218ENST00000569889 HSPA1BP0DMV9 641 aaKnown RBP16.13■□□□□ 0.17
RBFOX1-218ENST00000569889 WDR43Q15061 677 aaKnown RBP eCLIP16.13■□□□□ 0.17
RBFOX1-218ENST00000569889 KRT24Q2M2I5 525 aa16.13■□□□□ 0.17
RBFOX1-218ENST00000569889 GIGYF2Q6Y7W6 1299 aaKnown RBP16.13■□□□□ 0.17
RBFOX1-218ENST00000569889 ZNF34Q8IZ26 560 aa16.13■□□□□ 0.17
RBFOX1-218ENST00000569889 LARGE2Q8N3Y3 721 aa16.13■□□□□ 0.17
RBFOX1-218ENST00000569889 PPEF1O14829 653 aaPredicted RBP16.12■□□□□ 0.17
RBFOX1-218ENST00000569889 NTSR2O95665 410 aa16.12■□□□□ 0.17
RBFOX1-218ENST00000569889 EPHX2P34913 555 aa16.12■□□□□ 0.17
RBFOX1-218ENST00000569889 EIF6P56537 245 aaKnown RBP16.12■□□□□ 0.17
RBFOX1-218ENST00000569889 LMOD3Q0VAK6 560 aa16.12■□□□□ 0.17
RBFOX1-218ENST00000569889 COPS6Q7L5N1 327 aa16.12■□□□□ 0.17
RBFOX1-218ENST00000569889 LDHDQ86WU2 507 aa16.12■□□□□ 0.17
RBFOX1-218ENST00000569889 XAGE3Q8WTP9 111 aa16.12■□□□□ 0.17
RBFOX1-218ENST00000569889 NLRP3Q96P20 1036 aa16.12■□□□□ 0.17
RBFOX1-218ENST00000569889 UTP14AQ9BVJ6 771 aaKnown RBP16.12■□□□□ 0.17
RBFOX1-218ENST00000569889 TMX4Q9H1E5 349 aaPredicted RBP16.12■□□□□ 0.17
RBFOX1-218ENST00000569889 SCN4AP35499 1836 aa16.12■□□□□ 0.17
RBFOX1-218ENST00000569889 PDIA6Q15084 440 aa16.11■□□□□ 0.17
RBFOX1-218ENST00000569889 HCLS1P14317 486 aaPredicted RBP16.1■□□□□ 0.17
RBFOX1-218ENST00000569889 CRY2Q49AN0 593 aa16.1■□□□□ 0.17
RBFOX1-218ENST00000569889 MAP1SQ66K74 1059 aaPredicted RBP16.1■□□□□ 0.17
RBFOX1-218ENST00000569889 TNS4Q8IZW8 715 aa16.1■□□□□ 0.17
RBFOX1-218ENST00000569889 MYBBP1AQ9BQG0 1328 aaKnown RBP16.1■□□□□ 0.17
RBFOX1-218ENST00000569889 PARP10Q53GL7 1025 aa16.09■□□□□ 0.17
RBFOX1-218ENST00000569889 L3MBTL3Q96JM7 780 aaPredicted RBP16.09■□□□□ 0.17
RBFOX1-218ENST00000569889 CRAMP1Q96RY5 1269 aa16.09■□□□□ 0.17
RBFOX1-218ENST00000569889 CREBZFQ9NS37 354 aa16.09■□□□□ 0.17
RBFOX1-218ENST00000569889 ERBB4Q15303 1308 aa16.09■□□□□ 0.17
RBFOX1-218ENST00000569889 TAF1P21675 1872 aa16.09■□□□□ 0.17
RBFOX1-218ENST00000569889 FZD9O00144 591 aa16.08■□□□□ 0.16
RBFOX1-218ENST00000569889 PPIP5K2O43314 1243 aa16.08■□□□□ 0.16
RBFOX1-218ENST00000569889 LMOD1P29536 600 aaPredicted RBP16.08■□□□□ 0.16
RBFOX1-218ENST00000569889 HOXA10P31260 410 aaPredicted RBP16.08■□□□□ 0.16
RBFOX1-218ENST00000569889 CC2D2BQ6DHV5 1058 aa16.08■□□□□ 0.16
RBFOX1-218ENST00000569889 NIM1KQ8IY84 436 aa16.08■□□□□ 0.16
RBFOX1-218ENST00000569889 RUNDC1Q96C34 613 aa16.08■□□□□ 0.16
RBFOX1-218ENST00000569889 PSMD1Q99460 953 aa16.08■□□□□ 0.16
RBFOX1-218ENST00000569889 TRMT112Q9UI30 125 aaKnown RBP16.08■□□□□ 0.16
RBFOX1-218ENST00000569889 AOC3Q16853 763 aa16.07■□□□□ 0.16
RBFOX1-218ENST00000569889 RTL5Q5HYW3 569 aaPredicted RBP16.07■□□□□ 0.16
RBFOX1-218ENST00000569889 CNTROBQ8N137 903 aa16.07■□□□□ 0.16
RBFOX1-218ENST00000569889 GPC2Q8N158 579 aa16.07■□□□□ 0.16
RBFOX1-218ENST00000569889 CHPF2Q9P2E5 772 aa16.07■□□□□ 0.16
RBFOX1-218ENST00000569889 ADAMTS8Q9UP79 889 aa16.07■□□□□ 0.16
RBFOX1-218ENST00000569889 TMEM88BA6NKF7 163 aa16.06■□□□□ 0.16
RBFOX1-218ENST00000569889 EPS15P42566 896 aa16.06■□□□□ 0.16
RBFOX1-218ENST00000569889 HSP90AB3PQ58FF7 597 aa16.06■□□□□ 0.16
RBFOX1-218ENST00000569889 LRP10Q7Z4F1 713 aa16.06■□□□□ 0.16
RBFOX1-218ENST00000569889 NLRP10Q86W26 655 aa16.06■□□□□ 0.16
RBFOX1-218ENST00000569889 TRIM35Q9UPQ4 493 aa16.06■□□□□ 0.16
RBFOX1-218ENST00000569889 COL4A5P29400 1685 aa16.05■□□□□ 0.16
RBFOX1-218ENST00000569889 ABCC4O15439 1325 aa16.05■□□□□ 0.16
RBFOX1-218ENST00000569889 ATP5J2-PTCD1G3V325 749 aa16.05■□□□□ 0.16
RBFOX1-218ENST00000569889 ITGBL1O95965 494 aaPredicted RBP16.05■□□□□ 0.16
RBFOX1-218ENST00000569889 FMR1Q06787 632 aaKnown RBP eCLIP16.05■□□□□ 0.16
RBFOX1-218ENST00000569889 GRM1Q13255 1194 aa16.05■□□□□ 0.16
RBFOX1-218ENST00000569889 TCIRG1Q13488 830 aa16.05■□□□□ 0.16
RBFOX1-218ENST00000569889 HDGFL1Q5TGJ6 251 aa16.05■□□□□ 0.16
RBFOX1-218ENST00000569889 PAXIP1Q6ZW49 1069 aaPredicted RBP16.05■□□□□ 0.16
RBFOX1-218ENST00000569889 DDX46Q7L014 1031 aaKnown RBP16.05■□□□□ 0.16
RBFOX1-218ENST00000569889 PNMA8AQ86V59 439 aaPredicted RBP16.05■□□□□ 0.16
RBFOX1-218ENST00000569889 DDX21Q9NR30 783 aaKnown RBP eCLIP16.05■□□□□ 0.16
RBFOX1-218ENST00000569889 ABT1Q9ULW3 272 aaKnown RBP16.05■□□□□ 0.16
RBFOX1-218ENST00000569889 IBTKQ9P2D0 1353 aaPredicted RBP16.04■□□□□ 0.16
RBFOX1-218ENST00000569889 PASKQ96RG2 1323 aa16.04■□□□□ 0.16
RBFOX1-218ENST00000569889 ELL2O00472 640 aaPredicted RBP16.04■□□□□ 0.16
RBFOX1-218ENST00000569889 CHL1O00533 1208 aa16.04■□□□□ 0.16
RBFOX1-218ENST00000569889 SLC10A5Q5PT55 438 aa16.04■□□□□ 0.16
RBFOX1-218ENST00000569889 DPP8Q6V1X1 898 aaPredicted RBP16.04■□□□□ 0.16
RBFOX1-218ENST00000569889 BABAM1Q9NWV8 329 aa16.04■□□□□ 0.16
RBFOX1-218ENST00000569889 ATP6V0A2Q9Y487 856 aa16.04■□□□□ 0.16
RBFOX1-218ENST00000569889 LAMB2P55268 1798 aa16.04■□□□□ 0.16
RBFOX1-218ENST00000569889 ANKRD36CQ5JPF3 1778 aa16.04■□□□□ 0.16
RBFOX1-218ENST00000569889 PCNTO95613 3336 aa16.04■□□□□ 0.16
RBFOX1-218ENST00000569889 VEGFBP49765 207 aa16.03■□□□□ 0.16
RBFOX1-218ENST00000569889 MPNDQ8N594 471 aa16.03■□□□□ 0.16
RBFOX1-218ENST00000569889 SH3TC1Q8TE82 1336 aa16.02■□□□□ 0.16
RBFOX1-218ENST00000569889 FAM89AQ96GI7 184 aa16.02■□□□□ 0.16
RBFOX1-218ENST00000569889 CNTNAP1P78357 1384 aa16.01■□□□□ 0.15
RBFOX1-218ENST00000569889 BBOX1O75936 387 aa16.01■□□□□ 0.15
RBFOX1-218ENST00000569889 RAD17O75943 681 aa16.01■□□□□ 0.15
RBFOX1-218ENST00000569889 DEFB115Q30KQ5 88 aa16.01■□□□□ 0.15
RBFOX1-218ENST00000569889 GRIPAP1Q4V328 841 aa16.01■□□□□ 0.15
RBFOX1-218ENST00000569889 DUSP27Q5VZP5 1158 aa16.01■□□□□ 0.15
RBFOX1-218ENST00000569889 ANKRD13DQ6ZTN6 518 aa16.01■□□□□ 0.15
RBFOX1-218ENST00000569889 SUPT20HQ8NEM7 779 aa16.01■□□□□ 0.15
RBFOX1-218ENST00000569889 AIDAQ96BJ3 306 aa16.01■□□□□ 0.15
RBFOX1-218ENST00000569889 BCL2L13Q9BXK5 485 aa16.01■□□□□ 0.15
RBFOX1-218ENST00000569889 SNED1Q8TER0 1413 aa16.01■□□□□ 0.15
RBFOX1-218ENST00000569889 TRAF5O00463 557 aa16■□□□□ 0.15
RBFOX1-218ENST00000569889 APAF1O14727 1248 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms