RNA–Protein interactions for RNA: ENST00000569374.1

CCDC113-205, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-205ENST00000569374 WNT7BP56706 349 aa11.35□□□□□ -0.59
CCDC113-205ENST00000569374 BIN2Q9UBW5 565 aaPredicted RBP11.35□□□□□ -0.59
CCDC113-205ENST00000569374 MAP4K5Q9Y4K4 846 aa11.35□□□□□ -0.59
CCDC113-205ENST00000569374 SFI1A8K8P3 1242 aa11.34□□□□□ -0.59
CCDC113-205ENST00000569374 SERPINB4P48594 390 aa11.34□□□□□ -0.59
CCDC113-205ENST00000569374 TAS1R3Q7RTX0 852 aa11.34□□□□□ -0.59
CCDC113-205ENST00000569374 NHSL1Q5SYE7 1610 aa11.34□□□□□ -0.59
CCDC113-205ENST00000569374 KCNC4Q03721 635 aa11.33□□□□□ -0.6
CCDC113-205ENST00000569374 TRIM32Q13049 653 aa11.33□□□□□ -0.6
CCDC113-205ENST00000569374 OCLNQ16625 522 aa11.33□□□□□ -0.6
CCDC113-205ENST00000569374 VASH1Q7L8A9 365 aaPredicted RBP11.33□□□□□ -0.6
CCDC113-205ENST00000569374 ZNF428Q96B54 188 aa11.33□□□□□ -0.6
CCDC113-205ENST00000569374 LRP6O75581 1613 aa11.33□□□□□ -0.6
CCDC113-205ENST00000569374 ZNF326Q5BKZ1 582 aaKnown RBP11.32□□□□□ -0.6
CCDC113-205ENST00000569374 ANKLE1Q8NAG6 615 aa11.32□□□□□ -0.6
CCDC113-205ENST00000569374 PRIMPOLQ96LW4 560 aa11.32□□□□□ -0.6
CCDC113-205ENST00000569374 AHDC1Q5TGY3 1603 aaPredicted RBP11.31□□□□□ -0.6
CCDC113-205ENST00000569374 MSH6P52701 1360 aa11.31□□□□□ -0.6
CCDC113-205ENST00000569374 MARSP56192 900 aaKnown RBP11.31□□□□□ -0.6
CCDC113-205ENST00000569374 RAB15P59190 212 aa11.31□□□□□ -0.6
CCDC113-205ENST00000569374 FAM135BQ49AJ0 1406 aa11.31□□□□□ -0.6
CCDC113-205ENST00000569374 SPATA31E1Q6ZUB1 1445 aa11.31□□□□□ -0.6
CCDC113-205ENST00000569374 SHPRHQ149N8 1683 aa11.3□□□□□ -0.6
CCDC113-205ENST00000569374 KNDC1Q76NI1 1749 aa11.3□□□□□ -0.6
CCDC113-205ENST00000569374 PTCD1O75127 700 aaKnown RBP11.3□□□□□ -0.6
CCDC113-205ENST00000569374 ABL1P00519 1130 aa11.3□□□□□ -0.6
CCDC113-205ENST00000569374 DHX9Q08211 1270 aaKnown RBP11.3□□□□□ -0.6
CCDC113-205ENST00000569374 TBX22Q9Y458 520 aa11.3□□□□□ -0.6
CCDC113-205ENST00000569374 MST1RQ04912 1400 aa11.29□□□□□ -0.6
CCDC113-205ENST00000569374 RGS17Q9UGC6 210 aaPredicted RBP11.29□□□□□ -0.6
CCDC113-205ENST00000569374 RAB3GAP2Q9H2M9 1393 aa11.28□□□□□ -0.6
CCDC113-205ENST00000569374 ROBO2Q9HCK4 1378 aa11.28□□□□□ -0.6
CCDC113-205ENST00000569374 RGPD8O14715 1765 aaPredicted RBP11.28□□□□□ -0.6
CCDC113-205ENST00000569374 RBM47A0AV96 593 aaKnown RBP11.28□□□□□ -0.6
CCDC113-205ENST00000569374 BACH1O14867 736 aa11.28□□□□□ -0.6
CCDC113-205ENST00000569374 RPIAP49247 311 aa11.28□□□□□ -0.6
CCDC113-205ENST00000569374 INTS6LQ5JSJ4 861 aaKnown RBP11.28□□□□□ -0.6
CCDC113-205ENST00000569374 EHBP1Q8NDI1 1231 aa11.28□□□□□ -0.6
CCDC113-205ENST00000569374 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.28□□□□□ -0.6
CCDC113-205ENST00000569374 PIK3R4Q99570 1358 aa11.28□□□□□ -0.6
CCDC113-205ENST00000569374 ADGRL3Q9HAR2 1447 aa11.27□□□□□ -0.6
CCDC113-205ENST00000569374 RNF223E7ERA6 249 aa11.27□□□□□ -0.61
CCDC113-205ENST00000569374 ERVH48-1M5A8F1 160 aa11.27□□□□□ -0.61
CCDC113-205ENST00000569374 PPEF1O14829 653 aaPredicted RBP11.27□□□□□ -0.61
CCDC113-205ENST00000569374 WEE1P30291 646 aa11.27□□□□□ -0.61
CCDC113-205ENST00000569374 CC2D2BQ6DHV5 1058 aa11.27□□□□□ -0.61
CCDC113-205ENST00000569374 GLYCTKQ8IVS8 523 aa11.27□□□□□ -0.61
CCDC113-205ENST00000569374 TSEN2Q8NCE0 465 aaKnown RBP11.27□□□□□ -0.61
CCDC113-205ENST00000569374 H3BRB1 525 aa11.26□□□□□ -0.61
CCDC113-205ENST00000569374 CD2BP2O95400 341 aaKnown RBP11.26□□□□□ -0.61
CCDC113-205ENST00000569374 ERVK-9P63128 1117 aa11.26□□□□□ -0.61
CCDC113-205ENST00000569374 SF3B2Q13435 895 aaKnown RBP11.26□□□□□ -0.61
CCDC113-205ENST00000569374 DNAJC14Q6Y2X3 702 aaPredicted RBP11.26□□□□□ -0.61
CCDC113-205ENST00000569374 DDX17Q92841 729 aaKnown RBP11.26□□□□□ -0.61
CCDC113-205ENST00000569374 TUT1Q9H6E5 874 aaKnown RBP11.26□□□□□ -0.61
CCDC113-205ENST00000569374 HCSTQ9UBK5 93 aa11.26□□□□□ -0.61
CCDC113-205ENST00000569374 ADGRF5Q8IZF2 1346 aa11.26□□□□□ -0.61
CCDC113-205ENST00000569374 CCDC144AA2RUR9 1427 aa11.26□□□□□ -0.61
CCDC113-205ENST00000569374 SETD5Q9C0A6 1442 aa11.26□□□□□ -0.61
CCDC113-205ENST00000569374 ICMTO60725 284 aa11.25□□□□□ -0.61
CCDC113-205ENST00000569374 ITGBL1O95965 494 aaPredicted RBP11.25□□□□□ -0.61
CCDC113-205ENST00000569374 ARID5BQ14865 1188 aa11.25□□□□□ -0.61
CCDC113-205ENST00000569374 COL26A1Q96A83 441 aa11.25□□□□□ -0.61
CCDC113-205ENST00000569374 PTCH1Q13635 1447 aa11.25□□□□□ -0.61
CCDC113-205ENST00000569374 LAMC1P11047 1609 aa11.24□□□□□ -0.61
CCDC113-205ENST00000569374 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.24□□□□□ -0.61
CCDC113-205ENST00000569374 CDK15Q96Q40 435 aa11.24□□□□□ -0.61
CCDC113-205ENST00000569374 MPHOSPH9Q99550 1183 aa11.24□□□□□ -0.61
CCDC113-205ENST00000569374 ZNF358Q9NW07 568 aa11.24□□□□□ -0.61
CCDC113-205ENST00000569374 PLEKHH1Q9ULM0 1364 aa11.24□□□□□ -0.61
CCDC113-205ENST00000569374 PIK3C2GO75747 1445 aa11.24□□□□□ -0.61
CCDC113-205ENST00000569374 FMN2Q9NZ56 1722 aa11.23□□□□□ -0.61
CCDC113-205ENST00000569374 WASLO00401 505 aaPredicted RBP11.23□□□□□ -0.61
CCDC113-205ENST00000569374 FOXO3O43524 673 aa11.23□□□□□ -0.61
CCDC113-205ENST00000569374 C21orf2O43822 256 aa11.23□□□□□ -0.61
CCDC113-205ENST00000569374 IGFBP4P22692 258 aa11.23□□□□□ -0.61
CCDC113-205ENST00000569374 SCNN1AP37088 669 aa11.23□□□□□ -0.61
CCDC113-205ENST00000569374 BRINP3Q76B58 766 aa11.23□□□□□ -0.61
CCDC113-205ENST00000569374 GTF3C2Q8WUA4 911 aaPredicted RBP11.23□□□□□ -0.61
CCDC113-205ENST00000569374 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.23□□□□□ -0.61
CCDC113-205ENST00000569374 DCCP43146 1447 aa11.23□□□□□ -0.61
CCDC113-205ENST00000569374 PRAG1Q86YV5 1406 aa11.23□□□□□ -0.61
CCDC113-205ENST00000569374 CDC42BPGQ6DT37 1551 aa11.23□□□□□ -0.61
CCDC113-205ENST00000569374 SCTRP47872 440 aa11.22□□□□□ -0.61
CCDC113-205ENST00000569374 SKOR1P84550 965 aa11.22□□□□□ -0.61
CCDC113-205ENST00000569374 FKBP4Q02790 459 aaKnown RBP eCLIP11.22□□□□□ -0.61
CCDC113-205ENST00000569374 ZNF211Q13398 564 aaPredicted RBP11.22□□□□□ -0.61
CCDC113-205ENST00000569374 RGL3Q3MIN7 710 aa11.22□□□□□ -0.61
CCDC113-205ENST00000569374 CDAN1Q8IWY9 1227 aa11.22□□□□□ -0.61
CCDC113-205ENST00000569374 MPNDQ8N594 471 aa11.22□□□□□ -0.61
CCDC113-205ENST00000569374 GAS2L2Q8NHY3 880 aa11.22□□□□□ -0.61
CCDC113-205ENST00000569374 NCOA3Q9Y6Q9 1424 aa11.22□□□□□ -0.61
CCDC113-205ENST00000569374 NRXN1Q9ULB1 1477 aa11.21□□□□□ -0.61
CCDC113-205ENST00000569374 VTI1AQ96AJ9 217 aa11.21□□□□□ -0.61
CCDC113-205ENST00000569374 MKNK1Q9BUB5 465 aa11.21□□□□□ -0.61
CCDC113-205ENST00000569374 BCL2L13Q9BXK5 485 aa11.21□□□□□ -0.61
CCDC113-205ENST00000569374 BCL11AQ9H165 835 aa11.21□□□□□ -0.61
CCDC113-205ENST00000569374 USP32Q8NFA0 1604 aa11.2□□□□□ -0.62
CCDC113-205ENST00000569374 C1orf167Q5SNV9 1468 aa11.2□□□□□ -0.62
CCDC113-205ENST00000569374 FSHRP23945 695 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms