RNA–Protein interactions for RNA: ENST00000569225.5

CHD9-219, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 1,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-219ENST00000569225 NTSR2O95665 410 aa11.55□□□□□ -0.56
CHD9-219ENST00000569225 BRIP1Q9BX63 1249 aa11.55□□□□□ -0.56
CHD9-219ENST00000569225 SRCIN1Q9C0H9 1055 aa11.55□□□□□ -0.56
CHD9-219ENST00000569225 PDZRN3Q9UPQ7 1066 aa11.55□□□□□ -0.56
CHD9-219ENST00000569225 NEURL1BA8MQ27 555 aa11.55□□□□□ -0.56
CHD9-219ENST00000569225 ALDH1L1O75891 902 aa11.55□□□□□ -0.56
CHD9-219ENST00000569225 PDE6BP35913 854 aa11.55□□□□□ -0.56
CHD9-219ENST00000569225 BEND3Q5T5X7 828 aa11.55□□□□□ -0.56
CHD9-219ENST00000569225 ATF7IPQ6VMQ6 1270 aa11.55□□□□□ -0.56
CHD9-219ENST00000569225 FHDC1Q9C0D6 1143 aaPredicted RBP11.55□□□□□ -0.56
CHD9-219ENST00000569225 IGKV5-2P06315 115 aa11.54□□□□□ -0.56
CHD9-219ENST00000569225 MS4A1P11836 297 aa11.54□□□□□ -0.56
CHD9-219ENST00000569225 CCT4P50991 539 aaKnown RBP11.54□□□□□ -0.56
CHD9-219ENST00000569225 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.54□□□□□ -0.56
CHD9-219ENST00000569225 ZBTB38Q8NAP3 1195 aaPredicted RBP11.54□□□□□ -0.56
CHD9-219ENST00000569225 PXDNLA1KZ92 1463 aa11.54□□□□□ -0.56
CHD9-219ENST00000569225 TGFB2P61812 414 aa11.53□□□□□ -0.56
CHD9-219ENST00000569225 GCKRQ14397 625 aa11.53□□□□□ -0.56
CHD9-219ENST00000569225 CWF19L2Q2TBE0 894 aaKnown RBP11.53□□□□□ -0.56
CHD9-219ENST00000569225 ERFEQ4G0M1 354 aa11.53□□□□□ -0.56
CHD9-219ENST00000569225 NUTM1Q86Y26 1132 aa11.53□□□□□ -0.56
CHD9-219ENST00000569225 CACNA1FO60840 1977 aa11.53□□□□□ -0.56
CHD9-219ENST00000569225 PCCAP05165 728 aaPredicted RBP11.53□□□□□ -0.56
CHD9-219ENST00000569225 FTSJ3Q8IY81 847 aaKnown RBP11.53□□□□□ -0.56
CHD9-219ENST00000569225 ARFGEF2Q9Y6D5 1785 aa11.52□□□□□ -0.56
CHD9-219ENST00000569225 H0YIN7 160 aa11.52□□□□□ -0.57
CHD9-219ENST00000569225 TRIM27P14373 513 aa11.52□□□□□ -0.57
CHD9-219ENST00000569225 SLC10A5Q5PT55 438 aa11.52□□□□□ -0.57
CHD9-219ENST00000569225 FAM89AQ96GI7 184 aa11.52□□□□□ -0.57
CHD9-219ENST00000569225 SYT17Q9BSW7 474 aa11.52□□□□□ -0.57
CHD9-219ENST00000569225 C9orf78Q9NZ63 289 aaPredicted RBP11.52□□□□□ -0.57
CHD9-219ENST00000569225 RIC1Q4ADV7 1423 aa11.52□□□□□ -0.57
CHD9-219ENST00000569225 ABCC4O15439 1325 aa11.52□□□□□ -0.57
CHD9-219ENST00000569225 IRS4O14654 1257 aaPredicted RBP11.51□□□□□ -0.57
CHD9-219ENST00000569225 C2CD5Q86YS7 1000 aa11.51□□□□□ -0.57
CHD9-219ENST00000569225 CCDC24Q8N4L8 307 aa11.51□□□□□ -0.57
CHD9-219ENST00000569225 NLRP3Q96P20 1036 aa11.51□□□□□ -0.57
CHD9-219ENST00000569225 NUP98P52948 1817 aa11.51□□□□□ -0.57
CHD9-219ENST00000569225 ABCC12Q96J65 1359 aa11.51□□□□□ -0.57
CHD9-219ENST00000569225 GRM8O00222 908 aa11.51□□□□□ -0.57
CHD9-219ENST00000569225 DZIP1LQ8IYY4 767 aaKnown RBP11.51□□□□□ -0.57
CHD9-219ENST00000569225 CDHR2Q9BYE9 1310 aa11.5□□□□□ -0.57
CHD9-219ENST00000569225 NRXN2Q9P2S2 1712 aa11.5□□□□□ -0.57
CHD9-219ENST00000569225 H7C1W4 665 aa11.5□□□□□ -0.57
CHD9-219ENST00000569225 HCLS1P14317 486 aaPredicted RBP11.5□□□□□ -0.57
CHD9-219ENST00000569225 RTL5Q5HYW3 569 aaPredicted RBP11.5□□□□□ -0.57
CHD9-219ENST00000569225 INTS3Q68E01 1043 aaKnown RBP11.5□□□□□ -0.57
CHD9-219ENST00000569225 UBE3BQ7Z3V4 1068 aa11.5□□□□□ -0.57
CHD9-219ENST00000569225 CLUAP1Q96AJ1 413 aa11.5□□□□□ -0.57
CHD9-219ENST00000569225 HDAC5Q9UQL6 1122 aa11.5□□□□□ -0.57
CHD9-219ENST00000569225 ANKRD36CQ5JPF3 1778 aa11.49□□□□□ -0.57
CHD9-219ENST00000569225 KLRG2A4D1S0 409 aaPredicted RBP11.49□□□□□ -0.57
CHD9-219ENST00000569225 DPEP1P16444 411 aa11.49□□□□□ -0.57
CHD9-219ENST00000569225 NLGN2Q8NFZ4 835 aa11.49□□□□□ -0.57
CHD9-219ENST00000569225 RPGRQ92834 1020 aaKnown RBP11.49□□□□□ -0.57
CHD9-219ENST00000569225 A0A0G2JLW4 131 aa11.49□□□□□ -0.57
CHD9-219ENST00000569225 PDE8AO60658 829 aa11.49□□□□□ -0.57
CHD9-219ENST00000569225 NPR1P16066 1061 aa11.49□□□□□ -0.57
CHD9-219ENST00000569225 STYK1Q6J9G0 422 aa11.49□□□□□ -0.57
CHD9-219ENST00000569225 MASTLQ96GX5 879 aa11.49□□□□□ -0.57
CHD9-219ENST00000569225 SRGNP10124 158 aa11.48□□□□□ -0.57
CHD9-219ENST00000569225 CHRNA5P30532 468 aa11.48□□□□□ -0.57
CHD9-219ENST00000569225 CRY2Q49AN0 593 aa11.48□□□□□ -0.57
CHD9-219ENST00000569225 SYNE4Q8N205 404 aa11.48□□□□□ -0.57
CHD9-219ENST00000569225 CNKSR1Q969H4 720 aa11.48□□□□□ -0.57
CHD9-219ENST00000569225 RBM17Q96I25 401 aaKnown RBP11.48□□□□□ -0.57
CHD9-219ENST00000569225 PIM2Q9P1W9 311 aa11.48□□□□□ -0.57
CHD9-219ENST00000569225 DCAF8L1A6NGE4 600 aa11.47□□□□□ -0.57
CHD9-219ENST00000569225 PDE3AQ14432 1141 aa11.47□□□□□ -0.57
CHD9-219ENST00000569225 CCDC152Q4G0S7 254 aa11.47□□□□□ -0.57
CHD9-219ENST00000569225 JARID2Q92833 1246 aaPredicted RBP11.47□□□□□ -0.57
CHD9-219ENST00000569225 ZNF622Q969S3 477 aaKnown RBP eCLIP11.47□□□□□ -0.578e-8■■□□□ 11.6
CHD9-219ENST00000569225 PLA2G12BQ9BX93 195 aa11.47□□□□□ -0.57
CHD9-219ENST00000569225 UTYO14607 1347 aa11.47□□□□□ -0.57
CHD9-219ENST00000569225 SRCAPQ6ZRS2 3230 aa11.47□□□□□ -0.57
CHD9-219ENST00000569225 GNAI3P08754 354 aa11.46□□□□□ -0.57
CHD9-219ENST00000569225 UBTFL1P0CB47 393 aaPredicted RBP11.46□□□□□ -0.57
CHD9-219ENST00000569225 ALDH1B1P30837 517 aa11.46□□□□□ -0.57
CHD9-219ENST00000569225 HOXA10P31260 410 aaPredicted RBP11.46□□□□□ -0.57
CHD9-219ENST00000569225 CASP7P55210 303 aa11.46□□□□□ -0.57
CHD9-219ENST00000569225 CTSWP56202 376 aa11.46□□□□□ -0.57
CHD9-219ENST00000569225 SF3B3Q15393 1217 aaKnown RBP11.46□□□□□ -0.57
CHD9-219ENST00000569225 DALRD3Q5D0E6 543 aaKnown RBP11.46□□□□□ -0.57
CHD9-219ENST00000569225 DDX46Q7L014 1031 aaKnown RBP11.46□□□□□ -0.57
CHD9-219ENST00000569225 ITPRIPQ8IWB1 547 aa11.46□□□□□ -0.57
CHD9-219ENST00000569225 TMEM57Q8N5G2 664 aa11.46□□□□□ -0.57
CHD9-219ENST00000569225 TTLL6Q8N841 843 aa11.46□□□□□ -0.57
CHD9-219ENST00000569225 USP44Q9H0E7 712 aa11.46□□□□□ -0.57
CHD9-219ENST00000569225 CHMP4BQ9H444 224 aaKnown RBP11.46□□□□□ -0.57
CHD9-219ENST00000569225 AFDNP55196 1824 aaKnown RBP11.46□□□□□ -0.58
CHD9-219ENST00000569225 PLIN1O60240 522 aa11.46□□□□□ -0.58
CHD9-219ENST00000569225 RRP1P56182 461 aaKnown RBP11.46□□□□□ -0.58
CHD9-219ENST00000569225 C3orf67Q6ZVT6 689 aa11.46□□□□□ -0.58
CHD9-219ENST00000569225 TNNQ9UQP3 1299 aa11.46□□□□□ -0.58
CHD9-219ENST00000569225 NBPF7P0C2Y1 421 aaPredicted RBP11.45□□□□□ -0.58
CHD9-219ENST00000569225 KCNA3P22001 575 aa11.45□□□□□ -0.58
CHD9-219ENST00000569225 PANK1Q8TE04 598 aa11.45□□□□□ -0.58
CHD9-219ENST00000569225 CRAMP1Q96RY5 1269 aa11.45□□□□□ -0.58
CHD9-219ENST00000569225 RLBP1P12271 317 aa11.44□□□□□ -0.58
CHD9-219ENST00000569225 TMX4Q9H1E5 349 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms