RNA–Protein interactions for RNA: ENST00000569204.1

EPB42-208, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 3

Gene EPB42, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-208ENST00000569204 RPGRQ92834 1020 aaKnown RBP20.92■□□□□ 0.94
EPB42-208ENST00000569204 TRIM35Q9UPQ4 493 aa20.92■□□□□ 0.94
EPB42-208ENST00000569204 SNED1Q8TER0 1413 aa20.92■□□□□ 0.94
EPB42-208ENST00000569204 IARSP41252 1262 aaKnown RBP20.91■□□□□ 0.94
EPB42-208ENST00000569204 NECTIN2Q92692 538 aa20.91■□□□□ 0.94
EPB42-208ENST00000569204 ADAMTS8Q9UP79 889 aa20.91■□□□□ 0.94
EPB42-208ENST00000569204 IFFO2Q5TF58 517 aa20.9■□□□□ 0.94
EPB42-208ENST00000569204 CC2D2BQ6DHV5 1058 aa20.9■□□□□ 0.94
EPB42-208ENST00000569204 JMYQ8N9B5 988 aa20.9■□□□□ 0.94
EPB42-208ENST00000569204 PRKRIP1Q9H875 184 aaPredicted RBP20.9■□□□□ 0.94
EPB42-208ENST00000569204 LAS1LQ9Y4W2 734 aaKnown RBP20.9■□□□□ 0.94
EPB42-208ENST00000569204 IQCA1LA6NCM1 817 aa20.89■□□□□ 0.93
EPB42-208ENST00000569204 KRT24Q2M2I5 525 aa20.89■□□□□ 0.93
EPB42-208ENST00000569204 COPS6Q7L5N1 327 aa20.89■□□□□ 0.93
EPB42-208ENST00000569204 RBM17Q96I25 401 aaKnown RBP20.89■□□□□ 0.93
EPB42-208ENST00000569204 L3MBTL3Q96JM7 780 aaPredicted RBP20.89■□□□□ 0.93
EPB42-208ENST00000569204 CRAMP1Q96RY5 1269 aa20.89■□□□□ 0.93
EPB42-208ENST00000569204 PSMD1Q99460 953 aa20.89■□□□□ 0.93
EPB42-208ENST00000569204 ZNF541Q9H0D2 1346 aa20.88■□□□□ 0.93
EPB42-208ENST00000569204 AIMP1Q12904 312 aaKnown RBP20.88■□□□□ 0.93
EPB42-208ENST00000569204 HSP90AB3PQ58FF7 597 aa20.88■□□□□ 0.93
EPB42-208ENST00000569204 CHADLQ6NUI6 762 aa20.88■□□□□ 0.93
EPB42-208ENST00000569204 XAGE3Q8WTP9 111 aa20.88■□□□□ 0.93
EPB42-208ENST00000569204 NLRP3Q96P20 1036 aa20.88■□□□□ 0.93
EPB42-208ENST00000569204 UTP14AQ9BVJ6 771 aaKnown RBP20.88■□□□□ 0.93
EPB42-208ENST00000569204 DDX21Q9NR30 783 aaKnown RBP eCLIP20.88■□□□□ 0.93
EPB42-208ENST00000569204 LAMB2P55268 1798 aa20.87■□□□□ 0.93
EPB42-208ENST00000569204 POTEIP0CG38 1075 aa20.87■□□□□ 0.93
EPB42-208ENST00000569204 POTEJP0CG39 1038 aa20.87■□□□□ 0.93
EPB42-208ENST00000569204 SLC10A5Q5PT55 438 aa20.87■□□□□ 0.93
EPB42-208ENST00000569204 C3orf67Q6ZVT6 689 aa20.87■□□□□ 0.93
EPB42-208ENST00000569204 FZD9O00144 591 aa20.86■□□□□ 0.93
EPB42-208ENST00000569204 GRIPAP1Q4V328 841 aa20.86■□□□□ 0.93
EPB42-208ENST00000569204 TAF1DQ9H5J8 278 aaPredicted RBP20.86■□□□□ 0.93
EPB42-208ENST00000569204 RNF123Q5XPI4 1314 aa20.85■□□□□ 0.93
EPB42-208ENST00000569204 PPEF1O14829 653 aaPredicted RBP20.85■□□□□ 0.93
EPB42-208ENST00000569204 JDP2Q8WYK2 163 aa20.85■□□□□ 0.93
EPB42-208ENST00000569204 HOXB7P09629 217 aa20.84■□□□□ 0.93
EPB42-208ENST00000569204 TCIRG1Q13488 830 aa20.84■□□□□ 0.93
EPB42-208ENST00000569204 NLRP10Q86W26 655 aa20.84■□□□□ 0.93
EPB42-208ENST00000569204 LDHDQ86WU2 507 aa20.84■□□□□ 0.93
EPB42-208ENST00000569204 CFAP44Q96MT7 982 aa20.84■□□□□ 0.93
EPB42-208ENST00000569204 CHPF2Q9P2E5 772 aa20.84■□□□□ 0.93
EPB42-208ENST00000569204 TCERG1O14776 1098 aaKnown RBP20.83■□□□□ 0.93
EPB42-208ENST00000569204 HDGFL1Q5TGJ6 251 aa20.83■□□□□ 0.93
EPB42-208ENST00000569204 HACL1Q9UJ83 578 aa20.83■□□□□ 0.93
EPB42-208ENST00000569204 COL4A5P29400 1685 aa20.83■□□□□ 0.92
EPB42-208ENST00000569204 SLC51AQ86UW1 340 aa20.82■□□□□ 0.92
EPB42-208ENST00000569204 GPC2Q8N158 579 aa20.82■□□□□ 0.92
EPB42-208ENST00000569204 TRMT112Q9UI30 125 aaKnown RBP20.81■□□□□ 0.92
EPB42-208ENST00000569204 ATP6V0A2Q9Y487 856 aa20.81■□□□□ 0.92
EPB42-208ENST00000569204 ADAMTSL1Q8N6G6 1762 aa20.81■□□□□ 0.92
EPB42-208ENST00000569204 ABCC4O15439 1325 aa20.8■□□□□ 0.92
EPB42-208ENST00000569204 HCLS1P14317 486 aaPredicted RBP20.8■□□□□ 0.92
EPB42-208ENST00000569204 EPHX2P34913 555 aa20.8■□□□□ 0.92
EPB42-208ENST00000569204 EIF6P56537 245 aaKnown RBP20.8■□□□□ 0.92
EPB42-208ENST00000569204 EAPPQ56P03 285 aaPredicted RBP20.8■□□□□ 0.92
EPB42-208ENST00000569204 LARGE2Q8N3Y3 721 aa20.8■□□□□ 0.92
EPB42-208ENST00000569204 PLBD2Q8NHP8 589 aa20.8■□□□□ 0.92
EPB42-208ENST00000569204 TMX4Q9H1E5 349 aaPredicted RBP20.8■□□□□ 0.92
EPB42-208ENST00000569204 CREBZFQ9NS37 354 aa20.8■□□□□ 0.92
EPB42-208ENST00000569204 DBF4Q9UBU7 674 aaPredicted RBP20.8■□□□□ 0.92
EPB42-208ENST00000569204 SH3TC1Q8TE82 1336 aa20.79■□□□□ 0.92
EPB42-208ENST00000569204 DUSP27Q5VZP5 1158 aa20.79■□□□□ 0.92
EPB42-208ENST00000569204 MBIPQ9NS73 344 aa20.79■□□□□ 0.92
EPB42-208ENST00000569204 TAF1P21675 1872 aa20.79■□□□□ 0.92
EPB42-208ENST00000569204 PASKQ96RG2 1323 aa20.78■□□□□ 0.92
EPB42-208ENST00000569204 DDX60Q8IY21 1712 aaKnown RBP20.78■□□□□ 0.92
EPB42-208ENST00000569204 APAF1O14727 1248 aa20.78■□□□□ 0.92
EPB42-208ENST00000569204 ZNF853P0CG23 659 aa20.78■□□□□ 0.92
EPB42-208ENST00000569204 ANKRD13DQ6ZTN6 518 aa20.78■□□□□ 0.92
EPB42-208ENST00000569204 PNMA8AQ86V59 439 aaPredicted RBP20.78■□□□□ 0.92
EPB42-208ENST00000569204 CLEC11AQ9Y240 323 aa20.78■□□□□ 0.92
EPB42-208ENST00000569204 ZNF316A6NFI3 1004 aaPredicted RBP20.77■□□□□ 0.92
EPB42-208ENST00000569204 BBOX1O75936 387 aa20.77■□□□□ 0.92
EPB42-208ENST00000569204 HYPKQ9NX55 129 aa20.77■□□□□ 0.92
EPB42-208ENST00000569204 GJA3Q9Y6H8 435 aa20.77■□□□□ 0.92
EPB42-208ENST00000569204 LTBP1Q14766 1721 aa20.76■□□□□ 0.91
EPB42-208ENST00000569204 PPIP5K2O43314 1243 aa20.76■□□□□ 0.91
EPB42-208ENST00000569204 ITGBL1O95965 494 aaPredicted RBP20.76■□□□□ 0.91
EPB42-208ENST00000569204 DDX46Q7L014 1031 aaKnown RBP20.76■□□□□ 0.91
EPB42-208ENST00000569204 SP8Q8IXZ3 490 aa20.76■□□□□ 0.91
EPB42-208ENST00000569204 NIM1KQ8IY84 436 aa20.76■□□□□ 0.91
EPB42-208ENST00000569204 ISCA1Q9BUE6 129 aa20.76■□□□□ 0.91
EPB42-208ENST00000569204 VPS33BQ9H267 617 aa20.76■□□□□ 0.91
EPB42-208ENST00000569204 IFT57Q9NWB7 429 aa20.76■□□□□ 0.91
EPB42-208ENST00000569204 GNAI1P63096 354 aa20.75■□□□□ 0.91
EPB42-208ENST00000569204 CALD1Q05682 793 aaKnown RBP20.75■□□□□ 0.91
EPB42-208ENST00000569204 SUPT20HQ8NEM7 779 aa20.75■□□□□ 0.91
EPB42-208ENST00000569204 GRAPQ13588 217 aa20.74■□□□□ 0.91
EPB42-208ENST00000569204 AOC3Q16853 763 aa20.74■□□□□ 0.91
EPB42-208ENST00000569204 GRAPLQ8TC17 118 aaPredicted RBP20.74■□□□□ 0.91
EPB42-208ENST00000569204 ZNF428Q96B54 188 aa20.74■□□□□ 0.91
EPB42-208ENST00000569204 RTFDC1Q9BY42 306 aaPredicted RBP20.74■□□□□ 0.91
EPB42-208ENST00000569204 ATP5J2-PTCD1G3V325 749 aa20.73■□□□□ 0.91
EPB42-208ENST00000569204 LMOD1P29536 600 aaPredicted RBP20.73■□□□□ 0.91
EPB42-208ENST00000569204 MKRN1Q9UHC7 482 aaKnown RBP20.73■□□□□ 0.91
EPB42-208ENST00000569204 HSPA1AP0DMV8 641 aaKnown RBP20.72■□□□□ 0.91
EPB42-208ENST00000569204 HSPA1BP0DMV9 641 aaKnown RBP20.72■□□□□ 0.91
EPB42-208ENST00000569204 SCNN1DP51172 638 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms