RNA–Protein interactions for RNA: ENST00000565891.1

SPG7-212, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-212ENST00000565891 CHADLQ6NUI6 762 aa19.47■□□□□ 0.71
SPG7-212ENST00000565891 RBM17Q96I25 401 aaKnown RBP19.47■□□□□ 0.71
SPG7-212ENST00000565891 ADAMTS8Q9UP79 889 aa19.47■□□□□ 0.71
SPG7-212ENST00000565891 LAS1LQ9Y4W2 734 aaKnown RBP19.47■□□□□ 0.71
SPG7-212ENST00000565891 CACNA1SQ13698 1873 aa19.47■□□□□ 0.71
SPG7-212ENST00000565891 JMYQ8N9B5 988 aa19.46■□□□□ 0.71
SPG7-212ENST00000565891 NECTIN2Q92692 538 aa19.46■□□□□ 0.71
SPG7-212ENST00000565891 L3MBTL3Q96JM7 780 aaPredicted RBP19.46■□□□□ 0.71
SPG7-212ENST00000565891 NLRP3Q96P20 1036 aa19.46■□□□□ 0.71
SPG7-212ENST00000565891 CRAMP1Q96RY5 1269 aa19.46■□□□□ 0.71
SPG7-212ENST00000565891 PSMD1Q99460 953 aa19.46■□□□□ 0.71
SPG7-212ENST00000565891 UTP14AQ9BVJ6 771 aaKnown RBP19.46■□□□□ 0.71
SPG7-212ENST00000565891 TRIM35Q9UPQ4 493 aa19.46■□□□□ 0.71
SPG7-212ENST00000565891 RIC1Q4ADV7 1423 aa19.45■□□□□ 0.7
SPG7-212ENST00000565891 AIMP1Q12904 312 aaKnown RBP19.45■□□□□ 0.7
SPG7-212ENST00000565891 GRIPAP1Q4V328 841 aa19.45■□□□□ 0.7
SPG7-212ENST00000565891 HSP90AB3PQ58FF7 597 aa19.45■□□□□ 0.7
SPG7-212ENST00000565891 COPS6Q7L5N1 327 aa19.45■□□□□ 0.7
SPG7-212ENST00000565891 SLC10A5Q5PT55 438 aa19.44■□□□□ 0.7
SPG7-212ENST00000565891 XAGE3Q8WTP9 111 aa19.44■□□□□ 0.7
SPG7-212ENST00000565891 JDP2Q8WYK2 163 aa19.44■□□□□ 0.7
SPG7-212ENST00000565891 DDX21Q9NR30 783 aaKnown RBP eCLIP19.44■□□□□ 0.7
SPG7-212ENST00000565891 FZD9O00144 591 aa19.43■□□□□ 0.7
SPG7-212ENST00000565891 TMX4Q9H1E5 349 aaPredicted RBP19.43■□□□□ 0.7
SPG7-212ENST00000565891 TAF1DQ9H5J8 278 aaPredicted RBP19.43■□□□□ 0.7
SPG7-212ENST00000565891 PRKRIP1Q9H875 184 aaPredicted RBP19.43■□□□□ 0.7
SPG7-212ENST00000565891 ZNF541Q9H0D2 1346 aa19.43■□□□□ 0.7
SPG7-212ENST00000565891 PPEF1O14829 653 aaPredicted RBP19.42■□□□□ 0.7
SPG7-212ENST00000565891 POTEIP0CG38 1075 aa19.42■□□□□ 0.7
SPG7-212ENST00000565891 POTEJP0CG39 1038 aa19.42■□□□□ 0.7
SPG7-212ENST00000565891 KRT24Q2M2I5 525 aa19.42■□□□□ 0.7
SPG7-212ENST00000565891 C3orf67Q6ZVT6 689 aa19.42■□□□□ 0.7
SPG7-212ENST00000565891 RNF123Q5XPI4 1314 aa19.42■□□□□ 0.7
SPG7-212ENST00000565891 TCERG1O14776 1098 aaKnown RBP19.41■□□□□ 0.7
SPG7-212ENST00000565891 TCIRG1Q13488 830 aa19.41■□□□□ 0.7
SPG7-212ENST00000565891 LDHDQ86WU2 507 aa19.41■□□□□ 0.7
SPG7-212ENST00000565891 HACL1Q9UJ83 578 aa19.41■□□□□ 0.7
SPG7-212ENST00000565891 HOXB7P09629 217 aa19.4■□□□□ 0.7
SPG7-212ENST00000565891 NLRP10Q86W26 655 aa19.4■□□□□ 0.7
SPG7-212ENST00000565891 GPC2Q8N158 579 aa19.4■□□□□ 0.7
SPG7-212ENST00000565891 EIF6P56537 245 aaKnown RBP19.39■□□□□ 0.69
SPG7-212ENST00000565891 HDGFL1Q5TGJ6 251 aa19.39■□□□□ 0.69
SPG7-212ENST00000565891 LARGE2Q8N3Y3 721 aa19.39■□□□□ 0.69
SPG7-212ENST00000565891 CFAP44Q96MT7 982 aa19.39■□□□□ 0.69
SPG7-212ENST00000565891 CHPF2Q9P2E5 772 aa19.39■□□□□ 0.69
SPG7-212ENST00000565891 TRMT112Q9UI30 125 aaKnown RBP19.39■□□□□ 0.69
SPG7-212ENST00000565891 SNED1Q8TER0 1413 aa19.39■□□□□ 0.69
SPG7-212ENST00000565891 EPHX2P34913 555 aa19.38■□□□□ 0.69
SPG7-212ENST00000565891 EAPPQ56P03 285 aaPredicted RBP19.38■□□□□ 0.69
SPG7-212ENST00000565891 PNMA8AQ86V59 439 aaPredicted RBP19.38■□□□□ 0.69
SPG7-212ENST00000565891 DBF4Q9UBU7 674 aaPredicted RBP19.38■□□□□ 0.69
SPG7-212ENST00000565891 CLEC11AQ9Y240 323 aa19.38■□□□□ 0.69
SPG7-212ENST00000565891 ATP6V0A2Q9Y487 856 aa19.38■□□□□ 0.69
SPG7-212ENST00000565891 BBOX1O75936 387 aa19.37■□□□□ 0.69
SPG7-212ENST00000565891 HCLS1P14317 486 aaPredicted RBP19.37■□□□□ 0.69
SPG7-212ENST00000565891 CREBZFQ9NS37 354 aa19.37■□□□□ 0.69
SPG7-212ENST00000565891 SH3TC1Q8TE82 1336 aa19.36■□□□□ 0.69
SPG7-212ENST00000565891 DUSP27Q5VZP5 1158 aa19.36■□□□□ 0.69
SPG7-212ENST00000565891 ANKRD13DQ6ZTN6 518 aa19.36■□□□□ 0.69
SPG7-212ENST00000565891 PLBD2Q8NHP8 589 aa19.36■□□□□ 0.69
SPG7-212ENST00000565891 GJA3Q9Y6H8 435 aa19.36■□□□□ 0.69
SPG7-212ENST00000565891 SCN4AP35499 1836 aa19.36■□□□□ 0.69
SPG7-212ENST00000565891 ABCC4O15439 1325 aa19.35■□□□□ 0.69
SPG7-212ENST00000565891 APAF1O14727 1248 aa19.35■□□□□ 0.69
SPG7-212ENST00000565891 CALD1Q05682 793 aaKnown RBP19.35■□□□□ 0.69
SPG7-212ENST00000565891 DDX46Q7L014 1031 aaKnown RBP19.35■□□□□ 0.69
SPG7-212ENST00000565891 VPS33BQ9H267 617 aa19.35■□□□□ 0.69
SPG7-212ENST00000565891 MBIPQ9NS73 344 aa19.35■□□□□ 0.69
SPG7-212ENST00000565891 HYPKQ9NX55 129 aa19.35■□□□□ 0.69
SPG7-212ENST00000565891 PASKQ96RG2 1323 aa19.34■□□□□ 0.69
SPG7-212ENST00000565891 PPIP5K2O43314 1243 aa19.34■□□□□ 0.69
SPG7-212ENST00000565891 SP8Q8IXZ3 490 aa19.34■□□□□ 0.69
SPG7-212ENST00000565891 NIM1KQ8IY84 436 aa19.34■□□□□ 0.69
SPG7-212ENST00000565891 SUPT20HQ8NEM7 779 aa19.34■□□□□ 0.69
SPG7-212ENST00000565891 ITGBL1O95965 494 aaPredicted RBP19.33■□□□□ 0.68
SPG7-212ENST00000565891 ZNF853P0CG23 659 aa19.33■□□□□ 0.68
SPG7-212ENST00000565891 LMOD1P29536 600 aaPredicted RBP19.33■□□□□ 0.68
SPG7-212ENST00000565891 SLC51AQ86UW1 340 aa19.33■□□□□ 0.68
SPG7-212ENST00000565891 GNAI1P63096 354 aa19.32■□□□□ 0.68
SPG7-212ENST00000565891 DPP8Q6V1X1 898 aaPredicted RBP19.32■□□□□ 0.68
SPG7-212ENST00000565891 MPNDQ8N594 471 aa19.32■□□□□ 0.68
SPG7-212ENST00000565891 ISCA1Q9BUE6 129 aa19.32■□□□□ 0.68
SPG7-212ENST00000565891 IFT57Q9NWB7 429 aa19.32■□□□□ 0.68
SPG7-212ENST00000565891 MKRN1Q9UHC7 482 aaKnown RBP19.32■□□□□ 0.68
SPG7-212ENST00000565891 GRAPQ13588 217 aa19.31■□□□□ 0.68
SPG7-212ENST00000565891 AOC3Q16853 763 aa19.31■□□□□ 0.68
SPG7-212ENST00000565891 CNTROBQ8N137 903 aa19.31■□□□□ 0.68
SPG7-212ENST00000565891 GRAPLQ8TC17 118 aaPredicted RBP19.31■□□□□ 0.68
SPG7-212ENST00000565891 RTFDC1Q9BY42 306 aaPredicted RBP19.31■□□□□ 0.68
SPG7-212ENST00000565891 TMEM88BA6NKF7 163 aa19.3■□□□□ 0.68
SPG7-212ENST00000565891 ATP5J2-PTCD1G3V325 749 aa19.3■□□□□ 0.68
SPG7-212ENST00000565891 TMC4Q7Z404 712 aa19.3■□□□□ 0.68
SPG7-212ENST00000565891 ZNF428Q96B54 188 aa19.3■□□□□ 0.68
SPG7-212ENST00000565891 ZNRF3Q9ULT6 936 aa19.3■□□□□ 0.68
SPG7-212ENST00000565891 HSPA1AP0DMV8 641 aaKnown RBP19.29■□□□□ 0.68
SPG7-212ENST00000565891 HSPA1BP0DMV9 641 aaKnown RBP19.29■□□□□ 0.68
SPG7-212ENST00000565891 TRIM28Q13263 835 aaKnown RBP19.29■□□□□ 0.68
SPG7-212ENST00000565891 COL13A1Q5TAT6 717 aaPredicted RBP19.29■□□□□ 0.68
SPG7-212ENST00000565891 MAP1SQ66K74 1059 aaPredicted RBP19.29■□□□□ 0.68
SPG7-212ENST00000565891 FAM89AQ96GI7 184 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms