RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 COL4A5P29400 1685 aa31.11■■■□□ 2.57
RAB40C-209ENST00000565511 ZNF541Q9H0D2 1346 aa31.09■■■□□ 2.57
RAB40C-209ENST00000565511 DPY19L2Q6NUT2 758 aa31.09■■■□□ 2.57
RAB40C-209ENST00000565511 XAGE3Q8WTP9 111 aa31.09■■■□□ 2.57
RAB40C-209ENST00000565511 COPS6Q7L5N1 327 aa31.08■■■□□ 2.57
RAB40C-209ENST00000565511 POTEIP0CG38 1075 aa31.07■■■□□ 2.56
RAB40C-209ENST00000565511 POTEJP0CG39 1038 aa31.07■■■□□ 2.56
RAB40C-209ENST00000565511 ALDH1B1P30837 517 aa31.07■■■□□ 2.56
RAB40C-209ENST00000565511 AIMP1Q12904 312 aaKnown RBP31.07■■■□□ 2.56
RAB40C-209ENST00000565511 HOXA10P31260 410 aaPredicted RBP31.06■■■□□ 2.56
RAB40C-209ENST00000565511 CHPF2Q9P2E5 772 aa31.06■■■□□ 2.56
RAB40C-209ENST00000565511 SYNE4Q8N205 404 aa31.05■■■□□ 2.56
RAB40C-209ENST00000565511 PARP10Q53GL7 1025 aa31.04■■■□□ 2.56
RAB40C-209ENST00000565511 RTKN2Q8IZC4 609 aa31.04■■■□□ 2.56
RAB40C-209ENST00000565511 RPGRQ92834 1020 aaKnown RBP31.04■■■□□ 2.56
RAB40C-209ENST00000565511 DDX21Q9NR30 783 aaKnown RBP eCLIP31.04■■■□□ 2.56
RAB40C-209ENST00000565511 SCN4AP35499 1836 aa31.03■■■□□ 2.56
RAB40C-209ENST00000565511 IARSP41252 1262 aaKnown RBP31.02■■■□□ 2.56
RAB40C-209ENST00000565511 PPP1R42Q7Z4L9 355 aa31.02■■■□□ 2.56
RAB40C-209ENST00000565511 ZNF428Q96B54 188 aa31.02■■■□□ 2.56
RAB40C-209ENST00000565511 NLRP10Q86W26 655 aa31.01■■■□□ 2.55
RAB40C-209ENST00000565511 KLRG1Q96E93 195 aa31.01■■■□□ 2.55
RAB40C-209ENST00000565511 UTP14AQ9BVJ6 771 aaKnown RBP31.01■■■□□ 2.55
RAB40C-209ENST00000565511 MBIPQ9NS73 344 aa31.01■■■□□ 2.55
RAB40C-209ENST00000565511 TAF1P21675 1872 aa31.01■■■□□ 2.55
RAB40C-209ENST00000565511 APAF1O14727 1248 aa31■■■□□ 2.55
RAB40C-209ENST00000565511 TCERG1O14776 1098 aaKnown RBP31■■■□□ 2.55
RAB40C-209ENST00000565511 CCDC184Q52MB2 194 aa31■■■□□ 2.55
RAB40C-209ENST00000565511 L3MBTL3Q96JM7 780 aaPredicted RBP31■■■□□ 2.55
RAB40C-209ENST00000565511 CRAMP1Q96RY5 1269 aa31■■■□□ 2.55
RAB40C-209ENST00000565511 DDX60Q8IY21 1712 aaKnown RBP31■■■□□ 2.55
RAB40C-209ENST00000565511 SLC10A5Q5PT55 438 aa30.99■■■□□ 2.55
RAB40C-209ENST00000565511 HDGFL1Q5TGJ6 251 aa30.99■■■□□ 2.55
RAB40C-209ENST00000565511 RBM17Q96I25 401 aaKnown RBP30.99■■■□□ 2.55
RAB40C-209ENST00000565511 CFAP44Q96MT7 982 aa30.99■■■□□ 2.55
RAB40C-209ENST00000565511 PSMD1Q99460 953 aa30.99■■■□□ 2.55
RAB40C-209ENST00000565511 PPEF1O14829 653 aaPredicted RBP30.98■■■□□ 2.55
RAB40C-209ENST00000565511 ZNF853P0CG23 659 aa30.98■■■□□ 2.55
RAB40C-209ENST00000565511 HCLS1P14317 486 aaPredicted RBP30.97■■■□□ 2.55
RAB40C-209ENST00000565511 TCIRG1Q13488 830 aa30.97■■■□□ 2.55
RAB40C-209ENST00000565511 ADAMTSL1Q8N6G6 1762 aa30.97■■■□□ 2.55
RAB40C-209ENST00000565511 LTBP1Q14766 1721 aa30.96■■■□□ 2.55
RAB40C-209ENST00000565511 FZD9O00144 591 aa30.96■■■□□ 2.55
RAB40C-209ENST00000565511 DUSP27Q5VZP5 1158 aa30.96■■■□□ 2.55
RAB40C-209ENST00000565511 ABCC4O15439 1325 aa30.96■■■□□ 2.55
RAB40C-209ENST00000565511 COL4A1P02462 1669 aa30.95■■■□□ 2.55
RAB40C-209ENST00000565511 HOXB7P09629 217 aa30.95■■■□□ 2.55
RAB40C-209ENST00000565511 NLRP3Q96P20 1036 aa30.95■■■□□ 2.55
RAB40C-209ENST00000565511 TAF1DQ9H5J8 278 aaPredicted RBP30.95■■■□□ 2.55
RAB40C-209ENST00000565511 HSP90AB3PQ58FF7 597 aa30.94■■■□□ 2.54
RAB40C-209ENST00000565511 CHADLQ6NUI6 762 aa30.94■■■□□ 2.54
RAB40C-209ENST00000565511 CC2D2BQ6DHV5 1058 aa30.93■■■□□ 2.54
RAB40C-209ENST00000565511 JMYQ8N9B5 988 aa30.93■■■□□ 2.54
RAB40C-209ENST00000565511 RNF123Q5XPI4 1314 aa30.92■■■□□ 2.54
RAB40C-209ENST00000565511 PLBD2Q8NHP8 589 aa30.91■■■□□ 2.54
RAB40C-209ENST00000565511 TRMT112Q9UI30 125 aaKnown RBP30.91■■■□□ 2.54
RAB40C-209ENST00000565511 IFT57Q9NWB7 429 aa30.9■■■□□ 2.54
RAB40C-209ENST00000565511 DBF4Q9UBU7 674 aaPredicted RBP30.9■■■□□ 2.54
RAB40C-209ENST00000565511 IQCA1LA6NCM1 817 aa30.89■■■□□ 2.54
RAB40C-209ENST00000565511 ISCA1Q9BUE6 129 aa30.89■■■□□ 2.54
RAB40C-209ENST00000565511 ATP6V0A2Q9Y487 856 aa30.89■■■□□ 2.54
RAB40C-209ENST00000565511 SH3TC1Q8TE82 1336 aa30.89■■■□□ 2.54
RAB40C-209ENST00000565511 ATP5J2-PTCD1G3V325 749 aa30.88■■■□□ 2.53
RAB40C-209ENST00000565511 LRRC37AA6NMS7 1700 aa30.87■■■□□ 2.53
RAB40C-209ENST00000565511 ELL2O00472 640 aaPredicted RBP30.87■■■□□ 2.53
RAB40C-209ENST00000565511 ANKRD13DQ6ZTN6 518 aa30.87■■■□□ 2.53
RAB40C-209ENST00000565511 HACL1Q9UJ83 578 aa30.87■■■□□ 2.53
RAB40C-209ENST00000565511 DUOX1Q9NRD9 1551 aa30.87■■■□□ 2.53
RAB40C-209ENST00000565511 PCNTO95613 3336 aa30.86■■■□□ 2.53
RAB40C-209ENST00000565511 LDHDQ86WU2 507 aa30.86■■■□□ 2.53
RAB40C-209ENST00000565511 LARGE2Q8N3Y3 721 aa30.86■■■□□ 2.53
RAB40C-209ENST00000565511 JDP2Q8WYK2 163 aa30.86■■■□□ 2.53
RAB40C-209ENST00000565511 PASKQ96RG2 1323 aa30.85■■■□□ 2.53
RAB40C-209ENST00000565511 EPHX2P34913 555 aa30.85■■■□□ 2.53
RAB40C-209ENST00000565511 EAPPQ56P03 285 aaPredicted RBP30.85■■■□□ 2.53
RAB40C-209ENST00000565511 GPC2Q8N158 579 aa30.85■■■□□ 2.53
RAB40C-209ENST00000565511 C8orf58Q8NAV2 365 aa30.85■■■□□ 2.53
RAB40C-209ENST00000565511 PHAXQ9H814 394 aaKnown RBP30.85■■■□□ 2.53
RAB40C-209ENST00000565511 HYPKQ9NX55 129 aa30.85■■■□□ 2.53
RAB40C-209ENST00000565511 GNAI1P63096 354 aa30.84■■■□□ 2.53
RAB40C-209ENST00000565511 AOC3Q16853 763 aa30.84■■■□□ 2.53
RAB40C-209ENST00000565511 IFFO2Q5TF58 517 aa30.83■■■□□ 2.53
RAB40C-209ENST00000565511 FAM89AQ96GI7 184 aa30.83■■■□□ 2.53
RAB40C-209ENST00000565511 GJA3Q9Y6H8 435 aa30.83■■■□□ 2.53
RAB40C-209ENST00000565511 GRIPAP1Q4V328 841 aa30.82■■■□□ 2.52
RAB40C-209ENST00000565511 PPIP5K2O43314 1243 aa30.81■■■□□ 2.52
RAB40C-209ENST00000565511 EIF6P56537 245 aaKnown RBP30.81■■■□□ 2.52
RAB40C-209ENST00000565511 GRAPQ13588 217 aa30.81■■■□□ 2.52
RAB40C-209ENST00000565511 GRAPLQ8TC17 118 aaPredicted RBP30.81■■■□□ 2.52
RAB40C-209ENST00000565511 RTFDC1Q9BY42 306 aaPredicted RBP30.81■■■□□ 2.52
RAB40C-209ENST00000565511 ITGBL1O95965 494 aaPredicted RBP30.8■■■□□ 2.52
RAB40C-209ENST00000565511 SCNN1DP51172 638 aa30.8■■■□□ 2.52
RAB40C-209ENST00000565511 RTL5Q5HYW3 569 aaPredicted RBP30.8■■■□□ 2.52
RAB40C-209ENST00000565511 TSPYL6Q8N831 410 aa30.8■■■□□ 2.52
RAB40C-209ENST00000565511 DDX46Q7L014 1031 aaKnown RBP30.79■■■□□ 2.52
RAB40C-209ENST00000565511 SP8Q8IXZ3 490 aa30.79■■■□□ 2.52
RAB40C-209ENST00000565511 NIM1KQ8IY84 436 aa30.79■■■□□ 2.52
RAB40C-209ENST00000565511 BBOX1O75936 387 aa30.78■■■□□ 2.52
RAB40C-209ENST00000565511 CREBZFQ9NS37 354 aa30.78■■■□□ 2.52
RAB40C-209ENST00000565511 CALD1Q05682 793 aaKnown RBP30.77■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms