RNA–Protein interactions for RNA: ENST00000565503.5

RPUSD1-206, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 3

Gene RPUSD1, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-206ENST00000565503 MAP3K15Q6ZN16 1313 aa28.34■■■□□ 2.13
RPUSD1-206ENST00000565503 HOXA10P31260 410 aaPredicted RBP28.32■■■□□ 2.12
RPUSD1-206ENST00000565503 MAP1SQ66K74 1059 aaPredicted RBP28.32■■■□□ 2.12
RPUSD1-206ENST00000565503 NUTM1Q86Y26 1132 aa28.32■■■□□ 2.12
RPUSD1-206ENST00000565503 EIF6P56537 245 aaKnown RBP28.31■■■□□ 2.12
RPUSD1-206ENST00000565503 DEFB115Q30KQ5 88 aa28.31■■■□□ 2.12
RPUSD1-206ENST00000565503 KIF6Q6ZMV9 814 aa28.31■■■□□ 2.12
RPUSD1-206ENST00000565503 RPGRQ92834 1020 aaKnown RBP28.31■■■□□ 2.12
RPUSD1-206ENST00000565503 COL4A5P29400 1685 aa28.31■■■□□ 2.12
RPUSD1-206ENST00000565503 LTBP1Q14766 1721 aa28.3■■■□□ 2.12
RPUSD1-206ENST00000565503 NEFMP07197 916 aa28.3■■■□□ 2.12
RPUSD1-206ENST00000565503 NGEFQ8N5V2 710 aa28.3■■■□□ 2.12
RPUSD1-206ENST00000565503 TRPM7Q96QT4 1865 aa28.29■■■□□ 2.12
RPUSD1-206ENST00000565503 LMOD1P29536 600 aaPredicted RBP28.28■■■□□ 2.12
RPUSD1-206ENST00000565503 EIF4A1P60842 406 aaKnown RBP28.28■■■□□ 2.12
RPUSD1-206ENST00000565503 TTLL7Q6ZT98 887 aa28.27■■■□□ 2.12
RPUSD1-206ENST00000565503 RBM17Q96I25 401 aaKnown RBP28.27■■■□□ 2.12
RPUSD1-206ENST00000565503 CRAMP1Q96RY5 1269 aa28.27■■■□□ 2.12
RPUSD1-206ENST00000565503 RRP7AQ9Y3A4 280 aaKnown RBP28.27■■■□□ 2.12
RPUSD1-206ENST00000565503 GJA3Q9Y6H8 435 aa28.27■■■□□ 2.12
RPUSD1-206ENST00000565503 UBN2Q6ZU65 1347 aa28.26■■■□□ 2.11
RPUSD1-206ENST00000565503 THSD7BQ9C0I4 1608 aa28.25■■■□□ 2.11
RPUSD1-206ENST00000565503 WDR33Q9C0J8 1336 aaKnown RBP28.25■■■□□ 2.11
RPUSD1-206ENST00000565503 GPTP24298 496 aa28.25■■■□□ 2.11
RPUSD1-206ENST00000565503 LBX1P52954 281 aa28.25■■■□□ 2.11
RPUSD1-206ENST00000565503 MAP2K1Q02750 393 aaPredicted RBP28.25■■■□□ 2.11
RPUSD1-206ENST00000565503 LARGE2Q8N3Y3 721 aa28.25■■■□□ 2.11
RPUSD1-206ENST00000565503 DDX21Q9NR30 783 aaKnown RBP eCLIP28.25■■■□□ 2.11
RPUSD1-206ENST00000565503 ABT1Q9ULW3 272 aaKnown RBP28.25■■■□□ 2.11
RPUSD1-206ENST00000565503 ERBB4Q15303 1308 aa28.24■■■□□ 2.11
RPUSD1-206ENST00000565503 SUSD4Q5VX71 490 aa28.24■■■□□ 2.11
RPUSD1-206ENST00000565503 ZNF34Q8IZ26 560 aa28.24■■■□□ 2.11
RPUSD1-206ENST00000565503 PPEF1O14829 653 aaPredicted RBP28.23■■■□□ 2.11
RPUSD1-206ENST00000565503 MYL6BP14649 208 aa28.23■■■□□ 2.11
RPUSD1-206ENST00000565503 SCNN1DP51172 638 aa28.23■■■□□ 2.11
RPUSD1-206ENST00000565503 ZBTB3Q9H5J0 574 aa28.23■■■□□ 2.11
RPUSD1-206ENST00000565503 NTSR2O95665 410 aa28.22■■■□□ 2.11
RPUSD1-206ENST00000565503 HSPA8P11142 646 aaKnown RBP28.22■■■□□ 2.11
RPUSD1-206ENST00000565503 GIGYF2Q6Y7W6 1299 aaKnown RBP28.22■■■□□ 2.11
RPUSD1-206ENST00000565503 PLEKHF1Q96S99 279 aa28.22■■■□□ 2.11
RPUSD1-206ENST00000565503 EPS15P42566 896 aa28.21■■■□□ 2.11
RPUSD1-206ENST00000565503 NFE2L2Q16236 605 aa28.21■■■□□ 2.11
RPUSD1-206ENST00000565503 USP50Q70EL3 339 aaPredicted RBP28.21■■■□□ 2.11
RPUSD1-206ENST00000565503 PPP1R42Q7Z4L9 355 aa28.21■■■□□ 2.11
RPUSD1-206ENST00000565503 PARP10Q53GL7 1025 aa28.2■■■□□ 2.1
RPUSD1-206ENST00000565503 NIM1KQ8IY84 436 aa28.2■■■□□ 2.1
RPUSD1-206ENST00000565503 VPS33BQ9H267 617 aa28.2■■■□□ 2.1
RPUSD1-206ENST00000565503 TMX4Q9H1E5 349 aaPredicted RBP28.18■■■□□ 2.1
RPUSD1-206ENST00000565503 ECE1P42892 770 aa28.17■■■□□ 2.1
RPUSD1-206ENST00000565503 NLRP3Q96P20 1036 aa28.17■■■□□ 2.1
RPUSD1-206ENST00000565503 THUMPD2Q9BTF0 503 aaKnown RBP28.17■■■□□ 2.1
RPUSD1-206ENST00000565503 PNNQ9H307 717 aaKnown RBP28.17■■■□□ 2.1
RPUSD1-206ENST00000565503 LAMB2P55268 1798 aa28.16■■■□□ 2.1
RPUSD1-206ENST00000565503 ANKRD36CQ5JPF3 1778 aa28.16■■■□□ 2.1
RPUSD1-206ENST00000565503 PPIP5K2O43314 1243 aa28.16■■■□□ 2.1
RPUSD1-206ENST00000565503 C3orf67Q6ZVT6 689 aa28.16■■■□□ 2.1
RPUSD1-206ENST00000565503 CAPNS2Q96L46 248 aa28.16■■■□□ 2.1
RPUSD1-206ENST00000565503 ATP6V0A2Q9Y487 856 aa28.16■■■□□ 2.1
RPUSD1-206ENST00000565503 TCERG1O14776 1098 aaKnown RBP28.15■■■□□ 2.1
RPUSD1-206ENST00000565503 SLC10A5Q5PT55 438 aa28.15■■■□□ 2.1
RPUSD1-206ENST00000565503 SLC51AQ86UW1 340 aa28.14■■■□□ 2.1
RPUSD1-206ENST00000565503 SUPT20HQ8NEM7 779 aa28.14■■■□□ 2.1
RPUSD1-206ENST00000565503 MAPK8IP3Q9UPT6 1336 aa28.14■■■□□ 2.09
RPUSD1-206ENST00000565503 AOC3Q16853 763 aa28.13■■■□□ 2.09
RPUSD1-206ENST00000565503 LRP10Q7Z4F1 713 aa28.13■■■□□ 2.09
RPUSD1-206ENST00000565503 UTP14AQ9BVJ6 771 aaKnown RBP28.13■■■□□ 2.09
RPUSD1-206ENST00000565503 ADARB2Q9NS39 739 aaKnown RBP28.13■■■□□ 2.09
RPUSD1-206ENST00000565503 GPRC5DQ9NZD1 345 aa28.13■■■□□ 2.09
RPUSD1-206ENST00000565503 FMR1Q06787 632 aaKnown RBP eCLIP28.12■■■□□ 2.09
RPUSD1-206ENST00000565503 CST9Q5W186 159 aa28.12■■■□□ 2.09
RPUSD1-206ENST00000565503 ABHD8Q96I13 439 aa28.12■■■□□ 2.09
RPUSD1-206ENST00000565503 BEGAINQ9BUH8 593 aa28.12■■■□□ 2.09
RPUSD1-206ENST00000565503 RTFDC1Q9BY42 306 aaPredicted RBP28.12■■■□□ 2.09
RPUSD1-206ENST00000565503 TLL2Q9Y6L7 1015 aa28.12■■■□□ 2.09
RPUSD1-206ENST00000565503 PAXIP1Q6ZW49 1069 aaPredicted RBP28.11■■■□□ 2.09
RPUSD1-206ENST00000565503 TSPYL4Q9UJ04 414 aa28.11■■■□□ 2.09
RPUSD1-206ENST00000565503 ZNRF3Q9ULT6 936 aa28.11■■■□□ 2.09
RPUSD1-206ENST00000565503 ABCC4O15439 1325 aa28.11■■■□□ 2.09
RPUSD1-206ENST00000565503 TRAF5O00463 557 aa28.1■■■□□ 2.09
RPUSD1-206ENST00000565503 PDIA6Q15084 440 aa28.1■■■□□ 2.09
RPUSD1-206ENST00000565503 GPR101Q96P66 508 aaPredicted RBP28.1■■■□□ 2.09
RPUSD1-206ENST00000565503 BBOX1O75936 387 aa28.09■■■□□ 2.09
RPUSD1-206ENST00000565503 CXCL9Q07325 125 aa28.09■■■□□ 2.09
RPUSD1-206ENST00000565503 CYP4F22Q6NT55 531 aa28.09■■■□□ 2.09
RPUSD1-206ENST00000565503 CDHR2Q9BYE9 1310 aa28.09■■■□□ 2.09
RPUSD1-206ENST00000565503 BABAM1Q9NWV8 329 aa28.08■■■□□ 2.09
RPUSD1-206ENST00000565503 MAP2K2P36507 400 aa28.07■■■□□ 2.08
RPUSD1-206ENST00000565503 SP8Q8IXZ3 490 aa28.07■■■□□ 2.08
RPUSD1-206ENST00000565503 EIF2S2P20042 333 aaKnown RBP28.06■■■□□ 2.08
RPUSD1-206ENST00000565503 HSP90AB3PQ58FF7 597 aa28.06■■■□□ 2.08
RPUSD1-206ENST00000565503 DPP8Q6V1X1 898 aaPredicted RBP28.06■■■□□ 2.08
RPUSD1-206ENST00000565503 GMPSP49915 693 aaPredicted RBP28.05■■■□□ 2.08
RPUSD1-206ENST00000565503 KIAA2012Q0VF49 1180 aa28.05■■■□□ 2.08
RPUSD1-206ENST00000565503 GRM1Q13255 1194 aa28.05■■■□□ 2.08
RPUSD1-206ENST00000565503 PGAP2Q9UHJ9 254 aa28.05■■■□□ 2.08
RPUSD1-206ENST00000565503 PROSER3Q2NL68 480 aa28.04■■■□□ 2.08
RPUSD1-206ENST00000565503 CIAPIN1Q6FI81 312 aa28.04■■■□□ 2.08
RPUSD1-206ENST00000565503 SAPCD2Q86UD0 394 aa28.04■■■□□ 2.08
RPUSD1-206ENST00000565503 MPNDQ8N594 471 aa28.04■■■□□ 2.08
RPUSD1-206ENST00000565503 HHIPL1Q96JK4 782 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms