RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 MTRF1LQ9UGC7 380 aaKnown RBP5.81□□□□□ -1.48
SMG1-211ENST00000565324 LIMCH1Q9UPQ0 1083 aa5.81□□□□□ -1.48
SMG1-211ENST00000565324 RASSF2P50749 326 aa5.81□□□□□ -1.48
SMG1-211ENST00000565324 SNX16P57768 344 aa5.81□□□□□ -1.48
SMG1-211ENST00000565324 INTS8Q75QN2 995 aaKnown RBP5.81□□□□□ -1.48
SMG1-211ENST00000565324 MTIF2P46199 727 aaKnown RBP5.81□□□□□ -1.48
SMG1-211ENST00000565324 CUL5Q93034 780 aa5.81□□□□□ -1.48
SMG1-211ENST00000565324 DRC1Q96MC2 740 aa5.81□□□□□ -1.48
SMG1-211ENST00000565324 EXOC1Q9NV70 894 aa5.81□□□□□ -1.48
SMG1-211ENST00000565324 GPR161Q8N6U8 529 aaKnown RBP5.8□□□□□ -1.48
SMG1-211ENST00000565324 CCDC194A0A1B0GVG4 234 aa5.8□□□□□ -1.48
SMG1-211ENST00000565324 BUB1BO60566 1050 aaPredicted RBP5.8□□□□□ -1.48
SMG1-211ENST00000565324 WHAMMP3Q1A5X7 153 aa5.8□□□□□ -1.48
SMG1-211ENST00000565324 HDXQ7Z353 690 aa5.8□□□□□ -1.48
SMG1-211ENST00000565324 STX6O43752 255 aa5.8□□□□□ -1.48
SMG1-211ENST00000565324 FKBP4Q02790 459 aaKnown RBP eCLIP5.8□□□□□ -1.48
SMG1-211ENST00000565324 NEDD9Q14511 834 aa5.8□□□□□ -1.48
SMG1-211ENST00000565324 AFAP1L2Q8N4X5 818 aa5.8□□□□□ -1.48
SMG1-211ENST00000565324 VCX3AQ9NNX9 186 aa5.8□□□□□ -1.48
SMG1-211ENST00000565324 NOLC1Q14978 699 aaKnown RBP eCLIP5.8□□□□□ -1.48
SMG1-211ENST00000565324 SPATS2Q86XZ4 545 aaKnown RBP5.8□□□□□ -1.48
SMG1-211ENST00000565324 GABPB2Q8TAK5 448 aaPredicted RBP5.8□□□□□ -1.48
SMG1-211ENST00000565324 AIDAQ96BJ3 306 aa5.8□□□□□ -1.48
SMG1-211ENST00000565324 HECW1Q76N89 1606 aa5.8□□□□□ -1.48
SMG1-211ENST00000565324 SRGAP3O43295 1099 aa5.8□□□□□ -1.48
SMG1-211ENST00000565324 MCM6Q14566 821 aa5.8□□□□□ -1.48
SMG1-211ENST00000565324 HDGFL1Q5TGJ6 251 aa5.8□□□□□ -1.48
SMG1-211ENST00000565324 CSRNP2Q9H175 543 aa5.8□□□□□ -1.48
SMG1-211ENST00000565324 LRP2BPQ9P2M1 347 aa5.8□□□□□ -1.48
SMG1-211ENST00000565324 SLC12A7Q9Y666 1083 aa5.8□□□□□ -1.48
SMG1-211ENST00000565324 LUC7L3O95232 432 aaKnown RBP5.8□□□□□ -1.48
SMG1-211ENST00000565324 CCDC102BQ68D86 513 aa5.8□□□□□ -1.48
SMG1-211ENST00000565324 FSIP1Q8NA03 581 aa5.8□□□□□ -1.48
SMG1-211ENST00000565324 CEP126Q9P2H0 1117 aa5.8□□□□□ -1.48
SMG1-211ENST00000565324 BCAP29Q9UHQ4 241 aa5.8□□□□□ -1.48
SMG1-211ENST00000565324 HFM1A2PYH4 1435 aa5.8□□□□□ -1.48
SMG1-211ENST00000565324 TXNDC16Q9P2K2 825 aa5.8□□□□□ -1.48
SMG1-211ENST00000565324 DAPK1P53355 1430 aa5.8□□□□□ -1.48
SMG1-211ENST00000565324 NBPF8Q3BBV2 869 aa5.8□□□□□ -1.48
SMG1-211ENST00000565324 CFAP157Q5JU67 520 aa5.8□□□□□ -1.48
SMG1-211ENST00000565324 TRERF1Q96PN7 1200 aa5.8□□□□□ -1.48
SMG1-211ENST00000565324 TRMT1Q9NXH9 659 aaKnown RBP5.8□□□□□ -1.48
SMG1-211ENST00000565324 KDM4AO75164 1064 aa5.8□□□□□ -1.48
SMG1-211ENST00000565324 TNNC1P63316 161 aa5.8□□□□□ -1.48
SMG1-211ENST00000565324 APBB1IPQ7Z5R6 666 aaPredicted RBP5.8□□□□□ -1.48
SMG1-211ENST00000565324 GIGYF1O75420 1035 aaPredicted RBP5.79□□□□□ -1.48
SMG1-211ENST00000565324 CCDC40Q4G0X9 1142 aa5.79□□□□□ -1.48
SMG1-211ENST00000565324 DZIP1Q86YF9 867 aaKnown RBP5.79□□□□□ -1.48
SMG1-211ENST00000565324 NUTM2FA1L443 756 aa5.79□□□□□ -1.48
SMG1-211ENST00000565324 UBASH3AP57075 661 aa5.79□□□□□ -1.48
SMG1-211ENST00000565324 PPFIA1Q13136 1202 aa5.79□□□□□ -1.48
SMG1-211ENST00000565324 LRSAM1Q6UWE0 723 aa5.79□□□□□ -1.48
SMG1-211ENST00000565324 RFC1P35251 1148 aaPredicted RBP5.79□□□□□ -1.48
SMG1-211ENST00000565324 TAOK1Q7L7X3 1001 aa5.79□□□□□ -1.48
SMG1-211ENST00000565324 FAM200AQ8TCP9 573 aa5.79□□□□□ -1.48
SMG1-211ENST00000565324 HVCN1Q96D96 273 aa5.79□□□□□ -1.48
SMG1-211ENST00000565324 NKIRAS1Q9NYS0 192 aa5.79□□□□□ -1.48
SMG1-211ENST00000565324 MTUS1Q9ULD2 1270 aa5.79□□□□□ -1.48
SMG1-211ENST00000565324 DCAF8L1A6NGE4 600 aa5.79□□□□□ -1.48
SMG1-211ENST00000565324 SLC4A2P04920 1241 aa5.79□□□□□ -1.48
SMG1-211ENST00000565324 SEC62Q99442 399 aaKnown RBP5.79□□□□□ -1.48
SMG1-211ENST00000565324 SERPINA10Q9UK55 444 aa5.79□□□□□ -1.48
SMG1-211ENST00000565324 PCK1P35558 622 aa5.79□□□□□ -1.48
SMG1-211ENST00000565324 DNA2P51530 1060 aa5.79□□□□□ -1.48
SMG1-211ENST00000565324 CLNS1AP54105 237 aaKnown RBP5.79□□□□□ -1.48
SMG1-211ENST00000565324 TCERG1LQ5VWI1 586 aa5.79□□□□□ -1.48
SMG1-211ENST00000565324 NCAPGQ9BPX3 1015 aa5.79□□□□□ -1.48
SMG1-211ENST00000565324 ZEB2O60315 1214 aa5.79□□□□□ -1.48
SMG1-211ENST00000565324 ATF3P18847 181 aa5.79□□□□□ -1.48
SMG1-211ENST00000565324 PRKAR2BP31323 418 aa5.79□□□□□ -1.48
SMG1-211ENST00000565324 MSANTD4Q8NCY6 345 aa5.79□□□□□ -1.48
SMG1-211ENST00000565324 EPSTI1Q96J88 318 aa5.79□□□□□ -1.48
SMG1-211ENST00000565324 CEP85LQ5SZL2 805 aa5.79□□□□□ -1.48
SMG1-211ENST00000565324 MYCBPQ99417 103 aaPredicted RBP5.79□□□□□ -1.48
SMG1-211ENST00000565324 UBA5Q9GZZ9 404 aa5.79□□□□□ -1.48
SMG1-211ENST00000565324 VPS18Q9P253 973 aa5.79□□□□□ -1.48
SMG1-211ENST00000565324 LRRC9Q6ZRR7 1453 aa5.79□□□□□ -1.48
SMG1-211ENST00000565324 EXOSC9Q06265 439 aaKnown RBP5.79□□□□□ -1.48
SMG1-211ENST00000565324 SEPT10Q9P0V9 454 aa5.79□□□□□ -1.48
SMG1-211ENST00000565324 HMG20BQ9P0W2 317 aa5.79□□□□□ -1.48
SMG1-211ENST00000565324 ACTN4O43707 911 aaKnown RBP5.79□□□□□ -1.48
SMG1-211ENST00000565324 DNAJC8O75937 253 aaPredicted RBP5.79□□□□□ -1.48
SMG1-211ENST00000565324 SYCP3Q8IZU3 236 aa5.79□□□□□ -1.48
SMG1-211ENST00000565324 TRIM47Q96LD4 638 aa5.79□□□□□ -1.48
SMG1-211ENST00000565324 SPAG5Q96R06 1193 aa5.79□□□□□ -1.48
SMG1-211ENST00000565324 ZNF692Q9BU19 519 aaPredicted RBP5.79□□□□□ -1.48
SMG1-211ENST00000565324 ANKRD30BQ9BXX2 1392 aa5.79□□□□□ -1.48
SMG1-211ENST00000565324 NAPBQ9H115 298 aa5.79□□□□□ -1.48
SMG1-211ENST00000565324 NLRP2Q9NX02 1062 aa5.79□□□□□ -1.48
SMG1-211ENST00000565324 ADAMTS8Q9UP79 889 aa5.79□□□□□ -1.48
SMG1-211ENST00000565324 MX1P20591 662 aa5.78□□□□□ -1.48
SMG1-211ENST00000565324 THEGQ9P2T0 379 aa5.78□□□□□ -1.48
SMG1-211ENST00000565324 TRIM35Q9UPQ4 493 aa5.78□□□□□ -1.48
SMG1-211ENST00000565324 EHBP1L1Q8N3D4 1523 aa5.78□□□□□ -1.48
SMG1-211ENST00000565324 SKILP12757 684 aa5.78□□□□□ -1.48
SMG1-211ENST00000565324 KRT13P13646 458 aa5.78□□□□□ -1.48
SMG1-211ENST00000565324 TMOD2Q9NZR1 351 aa5.78□□□□□ -1.48
SMG1-211ENST00000565324 MGEA5O60502 916 aa5.78□□□□□ -1.48
SMG1-211ENST00000565324 UBA7P41226 1012 aa5.78□□□□□ -1.48
SMG1-211ENST00000565324 CKAP2LQ8IYA6 745 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms