RNA–Protein interactions for RNA: ENST00000565160.5

BBS4-208, Transcript of Bardet-Biedl syndrome 4, human

TSL 3

Gene BBS4, Length 681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-208	ENST00000565160	WEE1	P30291	646 aa		7.38	□□□□□ -1.23
BBS4-208	ENST00000565160	OCLN	Q16625	522 aa		7.38	□□□□□ -1.23
BBS4-208	ENST00000565160	WDR44	Q5JSH3	913 aa		7.38	□□□□□ -1.23
BBS4-208	ENST00000565160	CLP1	Q92989	425 aa	Known RBP	7.38	□□□□□ -1.23
BBS4-208	ENST00000565160	NIFK	Q9BYG3	293 aa	Known RBP	7.38	□□□□□ -1.23
BBS4-208	ENST00000565160	MYO3A	Q8NEV4	1616 aa		7.38	□□□□□ -1.23
BBS4-208	ENST00000565160	ATP10A	O60312	1499 aa		7.37	□□□□□ -1.23
BBS4-208	ENST00000565160	EML1	O00423	815 aa		7.37	□□□□□ -1.23
BBS4-208	ENST00000565160	PPP1R12B	O60237	982 aa	Predicted RBP	7.37	□□□□□ -1.23
BBS4-208	ENST00000565160	TOM1	O60784	492 aa		7.37	□□□□□ -1.23
BBS4-208	ENST00000565160	IGFBP4	P22692	258 aa		7.37	□□□□□ -1.23
BBS4-208	ENST00000565160	TEAD4	Q15561	434 aa		7.37	□□□□□ -1.23
BBS4-208	ENST00000565160	TIMMDC1	Q9NPL8	285 aa		7.37	□□□□□ -1.23
BBS4-208	ENST00000565160	RERE	Q9P2R6	1566 aa		7.37	□□□□□ -1.23
BBS4-208	ENST00000565160	SETBP1	Q9Y6X0	1596 aa		7.37	□□□□□ -1.23
BBS4-208	ENST00000565160	C9orf84	Q5VXU9	1444 aa		7.36	□□□□□ -1.23
BBS4-208	ENST00000565160	CTTNBP2	Q8WZ74	1663 aa		7.36	□□□□□ -1.23
BBS4-208	ENST00000565160	NOS2	P35228	1153 aa		7.36	□□□□□ -1.23
BBS4-208	ENST00000565160	TXLNA	P40222	546 aa		7.36	□□□□□ -1.23
BBS4-208	ENST00000565160	PSMA6	P60900	246 aa	Known RBP	7.36	□□□□□ -1.23
BBS4-208	ENST00000565160	CCDC155	Q8N6L0	562 aa		7.36	□□□□□ -1.23
BBS4-208	ENST00000565160	L3MBTL2	Q969R5	705 aa		7.36	□□□□□ -1.23
BBS4-208	ENST00000565160	CARMIL1	Q5VZK9	1371 aa		7.35	□□□□□ -1.23
BBS4-208	ENST00000565160	RNF17	Q9BXT8	1623 aa	Known RBP	7.35	□□□□□ -1.23
BBS4-208	ENST00000565160	PPFIA3	O75145	1194 aa		7.35	□□□□□ -1.23
BBS4-208	ENST00000565160	VEGFB	P49765	207 aa		7.35	□□□□□ -1.23
BBS4-208	ENST00000565160	FKBP5	Q13451	457 aa	Predicted RBP	7.35	□□□□□ -1.23
BBS4-208	ENST00000565160	C2orf49	Q9BVC5	232 aa	Predicted RBP	7.35	□□□□□ -1.23
BBS4-208	ENST00000565160	CUEDC1	Q9NWM3	386 aa	Predicted RBP	7.35	□□□□□ -1.23
BBS4-208	ENST00000565160	UST	Q9Y2C2	406 aa		7.35	□□□□□ -1.23
BBS4-208	ENST00000565160	DYRK1B	Q9Y463	629 aa		7.35	□□□□□ -1.23
BBS4-208	ENST00000565160	SHANK2	Q9UPX8	1470 aa		7.35	□□□□□ -1.23
BBS4-208	ENST00000565160	PTPRK	Q15262	1439 aa		7.35	□□□□□ -1.23
BBS4-208	ENST00000565160	DIP2C	Q9Y2E4	1556 aa		7.34	□□□□□ -1.23
BBS4-208	ENST00000565160	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	7.34	□□□□□ -1.23
BBS4-208	ENST00000565160	SERTM1	A2A2V5	107 aa		7.34	□□□□□ -1.23
BBS4-208	ENST00000565160	ATP4A	P20648	1035 aa		7.34	□□□□□ -1.23
BBS4-208	ENST00000565160	MSX1	P28360	303 aa		7.34	□□□□□ -1.23
BBS4-208	ENST00000565160	GAS2L1	Q99501	681 aa	Predicted RBP	7.34	□□□□□ -1.23
BBS4-208	ENST00000565160	GPAM	Q9HCL2	828 aa		7.34	□□□□□ -1.23
BBS4-208	ENST00000565160	CXXC1	Q9P0U4	656 aa	Predicted RBP	7.34	□□□□□ -1.23
BBS4-208	ENST00000565160	ZNF232	Q9UNY5	417 aa		7.34	□□□□□ -1.23
BBS4-208	ENST00000565160	AGL	P35573	1532 aa		7.33	□□□□□ -1.24
BBS4-208	ENST00000565160	LRRC7	Q96NW7	1537 aa		7.33	□□□□□ -1.24
BBS4-208	ENST00000565160		A0A1B0GTH6	734 aa		7.33	□□□□□ -1.24
BBS4-208	ENST00000565160	THBS1	P07996	1170 aa		7.33	□□□□□ -1.24
BBS4-208	ENST00000565160	ATP2B4	P23634	1241 aa		7.33	□□□□□ -1.24
BBS4-208	ENST00000565160	SCNN1A	P37088	669 aa		7.33	□□□□□ -1.24
BBS4-208	ENST00000565160	STAG2	Q8N3U4	1231 aa		7.33	□□□□□ -1.24
BBS4-208	ENST00000565160	AIDA	Q96BJ3	306 aa		7.33	□□□□□ -1.24
BBS4-208	ENST00000565160	KLRG1	Q96E93	195 aa		7.33	□□□□□ -1.24
BBS4-208	ENST00000565160	NXF1	Q9UBU9	619 aa	Known RBP	7.33	□□□□□ -1.24
BBS4-208	ENST00000565160	HCN4	Q9Y3Q4	1203 aa		7.33	□□□□□ -1.24
BBS4-208	ENST00000565160	ABCA6	Q8N139	1617 aa		7.33	□□□□□ -1.24
BBS4-208	ENST00000565160	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	7.32	□□□□□ -1.24
BBS4-208	ENST00000565160	FOXO3	O43524	673 aa		7.32	□□□□□ -1.24
BBS4-208	ENST00000565160	ITGA6	P23229	1130 aa		7.32	□□□□□ -1.24
BBS4-208	ENST00000565160	HIRA	P54198	1017 aa	Predicted RBP	7.32	□□□□□ -1.24
BBS4-208	ENST00000565160	PHLDB3	Q6NSJ2	640 aa		7.32	□□□□□ -1.24
BBS4-208	ENST00000565160	CAPN12	Q6ZSI9	719 aa		7.32	□□□□□ -1.24
BBS4-208	ENST00000565160	C7orf43	Q8WVR3	580 aa		7.32	□□□□□ -1.24
BBS4-208	ENST00000565160	RUBCNL	Q9H714	662 aa		7.32	□□□□□ -1.24
BBS4-208	ENST00000565160	ZDHHC3	Q9NYG2	299 aa		7.32	□□□□□ -1.24
BBS4-208	ENST00000565160	KDM5C	P41229	1560 aa		7.32	□□□□□ -1.24
BBS4-208	ENST00000565160	DNMT1	P26358	1616 aa	Known RBP	7.31	□□□□□ -1.24
BBS4-208	ENST00000565160	F11	P03951	625 aa		7.31	□□□□□ -1.24
BBS4-208	ENST00000565160	SSFA2	P28290	1259 aa		7.31	□□□□□ -1.24
BBS4-208	ENST00000565160	NPAT	Q14207	1427 aa		7.31	□□□□□ -1.24
BBS4-208	ENST00000565160	PHACTR1	Q9C0D0	580 aa		7.31	□□□□□ -1.24
BBS4-208	ENST00000565160		H3BM21	787 aa		7.3	□□□□□ -1.24
BBS4-208	ENST00000565160	TERT	O14746	1132 aa	Known RBP	7.3	□□□□□ -1.24
BBS4-208	ENST00000565160	DBN1	Q16643	649 aa		7.3	□□□□□ -1.24
BBS4-208	ENST00000565160	NBPF1	Q3BBV0	1214 aa		7.3	□□□□□ -1.24
BBS4-208	ENST00000565160	RIPOR1	Q6ZS17	1223 aa		7.3	□□□□□ -1.24
BBS4-208	ENST00000565160	ALDH16A1	Q8IZ83	802 aa		7.3	□□□□□ -1.24
BBS4-208	ENST00000565160	ZNF775	Q96BV0	537 aa	Predicted RBP	7.3	□□□□□ -1.24
BBS4-208	ENST00000565160	NGLY1	Q96IV0	654 aa		7.3	□□□□□ -1.24
BBS4-208	ENST00000565160	ZIC5	Q96T25	663 aa		7.3	□□□□□ -1.24
BBS4-208	ENST00000565160	MKNK1	Q9BUB5	465 aa		7.3	□□□□□ -1.24
BBS4-208	ENST00000565160	CHMP3	Q9Y3E7	222 aa		7.3	□□□□□ -1.24
BBS4-208	ENST00000565160	LRP5	O75197	1615 aa		7.3	□□□□□ -1.24
BBS4-208	ENST00000565160	KIF27	Q86VH2	1401 aa		7.29	□□□□□ -1.24
BBS4-208	ENST00000565160	LCE2C	Q5TA81	110 aa		7.29	□□□□□ -1.24
BBS4-208	ENST00000565160	CRISPLD1	Q9H336	500 aa		7.29	□□□□□ -1.24
BBS4-208	ENST00000565160	QTRT2	Q9H974	415 aa	Known RBP	7.29	□□□□□ -1.24
BBS4-208	ENST00000565160	SYNM	O15061	1565 aa		7.29	□□□□□ -1.24
BBS4-208	ENST00000565160	TAT	P17735	454 aa	Predicted RBP	7.28	□□□□□ -1.24
BBS4-208	ENST00000565160	NFX1	Q12986	1120 aa	Known RBP	7.28	□□□□□ -1.24
BBS4-208	ENST00000565160	NPAS3	Q8IXF0	933 aa		7.28	□□□□□ -1.24
BBS4-208	ENST00000565160	TRIM22	Q8IYM9	498 aa		7.28	□□□□□ -1.24
BBS4-208	ENST00000565160	C1orf216	Q8TAB5	229 aa		7.28	□□□□□ -1.24
BBS4-208	ENST00000565160	ZNF837	Q96EG3	531 aa	Predicted RBP	7.28	□□□□□ -1.24
BBS4-208	ENST00000565160	ERBB4	Q15303	1308 aa		7.27	□□□□□ -1.24
BBS4-208	ENST00000565160		A0A1W2PNR3	127 aa		7.27	□□□□□ -1.25
BBS4-208	ENST00000565160	CDC14C	A4D256	554 aa		7.27	□□□□□ -1.25
BBS4-208	ENST00000565160	UBAP2L	Q14157	1087 aa	Known RBP	7.27	□□□□□ -1.25
BBS4-208	ENST00000565160	C1orf53	Q5VUE5	145 aa		7.27	□□□□□ -1.25
BBS4-208	ENST00000565160	VWA5B2	Q8N398	1253 aa		7.27	□□□□□ -1.25
BBS4-208	ENST00000565160	GPR161	Q8N6U8	529 aa	Known RBP	7.27	□□□□□ -1.25
BBS4-208	ENST00000565160	RHPN1	Q8TCX5	695 aa		7.27	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms