RNA–Protein interactions for RNA: ENST00000564999.5

TCF4-225, Transcript of transcription factor 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene TCF4, Length 3,590 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-225ENST00000564999 PPP2R2DQ66LE6 453 aa8.84□□□□□ -0.99
TCF4-225ENST00000564999 ZNF594Q96JF6 807 aaPredicted RBP8.84□□□□□ -0.99
TCF4-225ENST00000564999 ARPC5LQ9BPX5 153 aa8.84□□□□□ -0.99
TCF4-225ENST00000564999 COMMD10Q9Y6G5 202 aa8.84□□□□□ -0.99
TCF4-225ENST00000564999 SPDYE16A6NNV3 312 aaPredicted RBP8.84□□□□□ -0.99
TCF4-225ENST00000564999 PRC1O43663 620 aa8.84□□□□□ -0.99
TCF4-225ENST00000564999 ATL2Q8NHH9 583 aa8.84□□□□□ -0.99
TCF4-225ENST00000564999 NUDCQ9Y266 331 aa8.84□□□□□ -0.99
TCF4-225ENST00000564999 PTCH1Q13635 1447 aa8.84□□□□□ -0.99
TCF4-225ENST00000564999 MED1Q15648 1581 aaPredicted RBP8.83□□□□□ -1
TCF4-225ENST00000564999 TERF1P54274 439 aa8.83□□□□□ -1
TCF4-225ENST00000564999 CTDSPL2Q05D32 466 aa8.83□□□□□ -1
TCF4-225ENST00000564999 DHX8Q14562 1220 aaKnown RBP8.83□□□□□ -1
TCF4-225ENST00000564999 SKAP1Q86WV1 359 aa8.83□□□□□ -1
TCF4-225ENST00000564999 NDUFB9Q9Y6M9 179 aa8.83□□□□□ -1
TCF4-225ENST00000564999 CEP170BQ9Y4F5 1589 aaPredicted RBP8.83□□□□□ -1
TCF4-225ENST00000564999 ALS2Q96Q42 1657 aa8.83□□□□□ -1
TCF4-225ENST00000564999 PPP4CP60510 307 aa8.83□□□□□ -1
TCF4-225ENST00000564999 USP48Q86UV5 1035 aa8.83□□□□□ -1
TCF4-225ENST00000564999 CDCA7LQ96GN5 454 aa8.83□□□□□ -1
TCF4-225ENST00000564999 CARD14Q9BXL6 1004 aa8.83□□□□□ -1
TCF4-225ENST00000564999 INTUQ9ULD6 942 aa8.83□□□□□ -1
TCF4-225ENST00000564999 CLEC11AQ9Y240 323 aa8.83□□□□□ -1
TCF4-225ENST00000564999 NKTRP30414 1462 aaKnown RBP8.83□□□□□ -1
TCF4-225ENST00000564999 FAM208AQ9UK61 1670 aaKnown RBP8.83□□□□□ -1
TCF4-225ENST00000564999 EAPPQ56P03 285 aaPredicted RBP8.82□□□□□ -1
TCF4-225ENST00000564999 ANKRD36BQ8N2N9 1353 aa8.82□□□□□ -1
TCF4-225ENST00000564999 CFAP69A5D8W1 941 aa8.82□□□□□ -1
TCF4-225ENST00000564999 PDE3BQ13370 1112 aa8.82□□□□□ -1
TCF4-225ENST00000564999 EXOC6Q8TAG9 804 aa8.82□□□□□ -1
TCF4-225ENST00000564999 SEPT3Q9UH03 358 aa8.82□□□□□ -1
TCF4-225ENST00000564999 ZNF280DQ6N043 979 aa8.82□□□□□ -1
TCF4-225ENST00000564999 GLYCTKQ8IVS8 523 aa8.82□□□□□ -1
TCF4-225ENST00000564999 LTN1O94822 1766 aa8.82□□□□□ -1
TCF4-225ENST00000564999 PLEKHH1Q9ULM0 1364 aa8.81□□□□□ -1
TCF4-225ENST00000564999 AMOTL1Q8IY63 956 aa8.81□□□□□ -1
TCF4-225ENST00000564999 KDM3BQ7LBC6 1761 aa8.81□□□□□ -1
TCF4-225ENST00000564999 NUTM2BA6NNL0 878 aaPredicted RBP8.81□□□□□ -1
TCF4-225ENST00000564999 NUTM2EB1AL46 878 aaPredicted RBP8.81□□□□□ -1
TCF4-225ENST00000564999 PAK3O75914 559 aaPredicted RBP8.81□□□□□ -1
TCF4-225ENST00000564999 NUTM2DQ5VT03 806 aaPredicted RBP8.81□□□□□ -1
TCF4-225ENST00000564999 ANKRD13DQ6ZTN6 518 aa8.81□□□□□ -1
TCF4-225ENST00000564999 NUTM2AQ8IVF1 878 aaPredicted RBP8.81□□□□□ -1
TCF4-225ENST00000564999 PPIP5K1Q6PFW1 1433 aa8.81□□□□□ -1
TCF4-225ENST00000564999 EIF3JO75822 258 aaKnown RBP8.81□□□□□ -1
TCF4-225ENST00000564999 PDGFRBP09619 1106 aa8.81□□□□□ -1
TCF4-225ENST00000564999 FTSJ3Q8IY81 847 aaKnown RBP8.81□□□□□ -1
TCF4-225ENST00000564999 PGBD3Q8N328 593 aa8.81□□□□□ -1
TCF4-225ENST00000564999 IPO4Q8TEX9 1081 aaKnown RBP8.81□□□□□ -1
TCF4-225ENST00000564999 CENPOQ9BU64 300 aa8.81□□□□□ -1
TCF4-225ENST00000564999 PPCSQ9HAB8 311 aa8.81□□□□□ -1
TCF4-225ENST00000564999 EID1Q9Y6B2 187 aa8.81□□□□□ -1
TCF4-225ENST00000564999 ABCC6O95255 1503 aa8.81□□□□□ -1
TCF4-225ENST00000564999 ANP32AP39687 249 aaKnown RBP8.8□□□□□ -1
TCF4-225ENST00000564999 KCNH2Q12809 1159 aa8.8□□□□□ -1
TCF4-225ENST00000564999 PODNQ7Z5L7 613 aa8.8□□□□□ -1
TCF4-225ENST00000564999 ABCA3Q99758 1704 aa8.8□□□□□ -1
TCF4-225ENST00000564999 CDK12Q9NYV4 1490 aaPredicted RBP8.8□□□□□ -1
TCF4-225ENST00000564999 IFNL1Q8IU54 200 aa8.8□□□□□ -1
TCF4-225ENST00000564999 C1orf131Q8NDD1 294 aaKnown RBP8.8□□□□□ -1
TCF4-225ENST00000564999 PRIMPOLQ96LW4 560 aa8.8□□□□□ -1
TCF4-225ENST00000564999 LRRC27Q9C0I9 530 aa8.8□□□□□ -1
TCF4-225ENST00000564999 NPDC1Q9NQX5 325 aaPredicted RBP8.8□□□□□ -1
TCF4-225ENST00000564999 CCAR1Q8IX12 1150 aaKnown RBP8.79□□□□□ -1
TCF4-225ENST00000564999 METTL3Q86U44 580 aaKnown RBP8.79□□□□□ -1
TCF4-225ENST00000564999 FERMT3Q86UX7 667 aa8.79□□□□□ -1
TCF4-225ENST00000564999 MCF2L2Q86YR7 1114 aa8.79□□□□□ -1
TCF4-225ENST00000564999 PANK3Q9H999 370 aa8.79□□□□□ -1
TCF4-225ENST00000564999 GPHNQ9NQX3 736 aaPredicted RBP8.79□□□□□ -1
TCF4-225ENST00000564999 PTPRUQ92729 1446 aa8.79□□□□□ -1
TCF4-225ENST00000564999 RACK1P63244 317 aaKnown RBP8.79□□□□□ -1
TCF4-225ENST00000564999 SPIRE2Q8WWL2 714 aa8.79□□□□□ -1
TCF4-225ENST00000564999 COL18A1P39060 1754 aa8.79□□□□□ -1
TCF4-225ENST00000564999 ATP9BO43861 1147 aa8.78□□□□□ -1
TCF4-225ENST00000564999 TPX2Q9ULW0 747 aaKnown RBP8.78□□□□□ -1
TCF4-225ENST00000564999 GLI3P10071 1580 aa8.78□□□□□ -1
TCF4-225ENST00000564999 NCAPD2Q15021 1401 aa8.78□□□□□ -1
TCF4-225ENST00000564999 USP17L3A6NCW0 530 aa8.78□□□□□ -1
TCF4-225ENST00000564999 USP17L4A6NCW7 530 aa8.78□□□□□ -1
TCF4-225ENST00000564999 MAP3K7O43318 606 aa8.78□□□□□ -1
TCF4-225ENST00000564999 DNAJC6O75061 913 aa8.78□□□□□ -1
TCF4-225ENST00000564999 USP17L2Q6R6M4 530 aa8.78□□□□□ -1
TCF4-225ENST00000564999 USP17L1Q7RTZ2 530 aa8.78□□□□□ -1
TCF4-225ENST00000564999 ARHGEF10LQ9HCE6 1279 aa8.78□□□□□ -1
TCF4-225ENST00000564999 PRM3Q9NNZ6 103 aa8.78□□□□□ -1
TCF4-225ENST00000564999 RCAN3Q9UKA8 241 aa8.78□□□□□ -1
TCF4-225ENST00000564999 INPP5FQ9Y2H2 1132 aa8.78□□□□□ -1
TCF4-225ENST00000564999 KIF3BO15066 747 aa8.78□□□□□ -1
TCF4-225ENST00000564999 MAPK8P45983 427 aa8.78□□□□□ -1
TCF4-225ENST00000564999 ZKSCAN2Q63HK3 967 aa8.78□□□□□ -1
TCF4-225ENST00000564999 NLRP13Q86W25 1043 aa8.78□□□□□ -1
TCF4-225ENST00000564999 JAMLQ86YT9 394 aa8.78□□□□□ -1
TCF4-225ENST00000564999 K7ELQ4 463 aaPredicted RBP8.77□□□□□ -1
TCF4-225ENST00000564999 RRM1P23921 792 aa8.77□□□□□ -1
TCF4-225ENST00000564999 HLA-CQ95604 372 aa8.77□□□□□ -1
TCF4-225ENST00000564999 TNNT2P45379 298 aaPredicted RBP8.77□□□□□ -1.01
TCF4-225ENST00000564999 SAFB2Q14151 953 aaKnown RBP eCLIP8.77□□□□□ -1.01
TCF4-225ENST00000564999 PARP4Q9UKK3 1724 aaKnown RBP8.77□□□□□ -1.01
TCF4-225ENST00000564999 HSD3B2P26439 372 aa8.77□□□□□ -1.01
TCF4-225ENST00000564999 PDILTQ8N807 584 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms