RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 CHL1O00533 1208 aa24.2■■□□□ 1.46
CLN6-204ENST00000564752 NEUROD2Q15784 382 aa24.2■■□□□ 1.46
CLN6-204ENST00000564752 COL13A1Q5TAT6 717 aaPredicted RBP24.2■■□□□ 1.46
CLN6-204ENST00000564752 CC2D2BQ6DHV5 1058 aa24.2■■□□□ 1.46
CLN6-204ENST00000564752 CHADLQ6NUI6 762 aa24.2■■□□□ 1.46
CLN6-204ENST00000564752 RPGRQ92834 1020 aaKnown RBP24.2■■□□□ 1.46
CLN6-204ENST00000564752 RUNDC1Q96C34 613 aa24.2■■□□□ 1.46
CLN6-204ENST00000564752 PSMD1Q99460 953 aa24.2■■□□□ 1.46
CLN6-204ENST00000564752 ANXA1P04083 346 aa24.19■■□□□ 1.46
CLN6-204ENST00000564752 POTEIP0CG38 1075 aa24.19■■□□□ 1.46
CLN6-204ENST00000564752 POTEJP0CG39 1038 aa24.19■■□□□ 1.46
CLN6-204ENST00000564752 IARSP41252 1262 aaKnown RBP24.19■■□□□ 1.46
CLN6-204ENST00000564752 RBM17Q96I25 401 aaKnown RBP24.19■■□□□ 1.46
CLN6-204ENST00000564752 TRIM35Q9UPQ4 493 aa24.19■■□□□ 1.46
CLN6-204ENST00000564752 ZNF541Q9H0D2 1346 aa24.18■■□□□ 1.46
CLN6-204ENST00000564752 FZD9O00144 591 aa24.18■■□□□ 1.46
CLN6-204ENST00000564752 CRAMP1Q96RY5 1269 aa24.18■■□□□ 1.46
CLN6-204ENST00000564752 SNED1Q8TER0 1413 aa24.18■■□□□ 1.46
CLN6-204ENST00000564752 SLC10A5Q5PT55 438 aa24.17■■□□□ 1.46
CLN6-204ENST00000564752 C3orf67Q6ZVT6 689 aa24.17■■□□□ 1.46
CLN6-204ENST00000564752 COPS6Q7L5N1 327 aa24.17■■□□□ 1.46
CLN6-204ENST00000564752 UTP14AQ9BVJ6 771 aaKnown RBP24.17■■□□□ 1.46
CLN6-204ENST00000564752 TAF1DQ9H5J8 278 aaPredicted RBP24.17■■□□□ 1.46
CLN6-204ENST00000564752 ADAMTS8Q9UP79 889 aa24.17■■□□□ 1.46
CLN6-204ENST00000564752 GRIPAP1Q4V328 841 aa24.16■■□□□ 1.46
CLN6-204ENST00000564752 NECTIN2Q92692 538 aa24.16■■□□□ 1.46
CLN6-204ENST00000564752 NLRP3Q96P20 1036 aa24.16■■□□□ 1.46
CLN6-204ENST00000564752 XAGE3Q8WTP9 111 aa24.15■■□□□ 1.46
CLN6-204ENST00000564752 ZNF316A6NFI3 1004 aaPredicted RBP24.14■■□□□ 1.45
CLN6-204ENST00000564752 AIMP1Q12904 312 aaKnown RBP24.14■■□□□ 1.45
CLN6-204ENST00000564752 KRT24Q2M2I5 525 aa24.14■■□□□ 1.45
CLN6-204ENST00000564752 LDHDQ86WU2 507 aa24.14■■□□□ 1.45
CLN6-204ENST00000564752 DDX21Q9NR30 783 aaKnown RBP eCLIP24.14■■□□□ 1.45
CLN6-204ENST00000564752 LAS1LQ9Y4W2 734 aaKnown RBP24.14■■□□□ 1.45
CLN6-204ENST00000564752 CAPN15O75808 1086 aa24.13■■□□□ 1.45
CLN6-204ENST00000564752 HSP90AB3PQ58FF7 597 aa24.13■■□□□ 1.45
CLN6-204ENST00000564752 JDP2Q8WYK2 163 aa24.13■■□□□ 1.45
CLN6-204ENST00000564752 HACL1Q9UJ83 578 aa24.13■■□□□ 1.45
CLN6-204ENST00000564752 PPEF1O14829 653 aaPredicted RBP24.12■■□□□ 1.45
CLN6-204ENST00000564752 RNF123Q5XPI4 1314 aa24.11■■□□□ 1.45
CLN6-204ENST00000564752 TCIRG1Q13488 830 aa24.11■■□□□ 1.45
CLN6-204ENST00000564752 SLC51AQ86UW1 340 aa24.11■■□□□ 1.45
CLN6-204ENST00000564752 NLRP10Q86W26 655 aa24.11■■□□□ 1.45
CLN6-204ENST00000564752 TNS4Q8IZW8 715 aa24.11■■□□□ 1.45
CLN6-204ENST00000564752 GPC2Q8N158 579 aa24.11■■□□□ 1.45
CLN6-204ENST00000564752 CREBZFQ9NS37 354 aa24.11■■□□□ 1.45
CLN6-204ENST00000564752 TCERG1O14776 1098 aaKnown RBP24.1■■□□□ 1.45
CLN6-204ENST00000564752 PASKQ96RG2 1323 aa24.1■■□□□ 1.45
CLN6-204ENST00000564752 HOXB7P09629 217 aa24.09■■□□□ 1.45
CLN6-204ENST00000564752 HSPA1AP0DMV8 641 aaKnown RBP24.09■■□□□ 1.45
CLN6-204ENST00000564752 HSPA1BP0DMV9 641 aaKnown RBP24.09■■□□□ 1.45
CLN6-204ENST00000564752 EPHX2P34913 555 aa24.09■■□□□ 1.45
CLN6-204ENST00000564752 CFAP44Q96MT7 982 aa24.09■■□□□ 1.45
CLN6-204ENST00000564752 EIF6P56537 245 aaKnown RBP24.08■■□□□ 1.45
CLN6-204ENST00000564752 EAPPQ56P03 285 aaPredicted RBP24.08■■□□□ 1.45
CLN6-204ENST00000564752 HDGFL1Q5TGJ6 251 aa24.08■■□□□ 1.45
CLN6-204ENST00000564752 PNMA8AQ86V59 439 aaPredicted RBP24.08■■□□□ 1.45
CLN6-204ENST00000564752 LARGE2Q8N3Y3 721 aa24.08■■□□□ 1.45
CLN6-204ENST00000564752 CHPF2Q9P2E5 772 aa24.08■■□□□ 1.45
CLN6-204ENST00000564752 ATP6V0A2Q9Y487 856 aa24.08■■□□□ 1.45
CLN6-204ENST00000564752 SCN4AP35499 1836 aa24.07■■□□□ 1.44
CLN6-204ENST00000564752 ITGBL1O95965 494 aaPredicted RBP24.07■■□□□ 1.44
CLN6-204ENST00000564752 HCLS1P14317 486 aaPredicted RBP24.07■■□□□ 1.44
CLN6-204ENST00000564752 TRMT112Q9UI30 125 aaKnown RBP24.07■■□□□ 1.44
CLN6-204ENST00000564752 ABCC4O15439 1325 aa24.07■■□□□ 1.44
CLN6-204ENST00000564752 BBOX1O75936 387 aa24.06■■□□□ 1.44
CLN6-204ENST00000564752 TMX4Q9H1E5 349 aaPredicted RBP24.06■■□□□ 1.44
CLN6-204ENST00000564752 CLEC11AQ9Y240 323 aa24.06■■□□□ 1.44
CLN6-204ENST00000564752 COL4A5P29400 1685 aa24.05■■□□□ 1.44
CLN6-204ENST00000564752 VPS33BQ9H267 617 aa24.05■■□□□ 1.44
CLN6-204ENST00000564752 DBF4Q9UBU7 674 aaPredicted RBP24.05■■□□□ 1.44
CLN6-204ENST00000564752 GJA3Q9Y6H8 435 aa24.05■■□□□ 1.44
CLN6-204ENST00000564752 SH3TC1Q8TE82 1336 aa24.05■■□□□ 1.44
CLN6-204ENST00000564752 ANKRD13DQ6ZTN6 518 aa24.04■■□□□ 1.44
CLN6-204ENST00000564752 PLBD2Q8NHP8 589 aa24.04■■□□□ 1.44
CLN6-204ENST00000564752 ZNF853P0CG23 659 aa24.03■■□□□ 1.44
CLN6-204ENST00000564752 DUSP27Q5VZP5 1158 aa24.03■■□□□ 1.44
CLN6-204ENST00000564752 SP8Q8IXZ3 490 aa24.03■■□□□ 1.44
CLN6-204ENST00000564752 RTFDC1Q9BY42 306 aaPredicted RBP24.03■■□□□ 1.44
CLN6-204ENST00000564752 MBIPQ9NS73 344 aa24.03■■□□□ 1.44
CLN6-204ENST00000564752 MKRN1Q9UHC7 482 aaKnown RBP24.03■■□□□ 1.44
CLN6-204ENST00000564752 PPIP5K2O43314 1243 aa24.02■■□□□ 1.44
CLN6-204ENST00000564752 DDX46Q7L014 1031 aaKnown RBP24.02■■□□□ 1.44
CLN6-204ENST00000564752 NIM1KQ8IY84 436 aa24.02■■□□□ 1.44
CLN6-204ENST00000564752 APAF1O14727 1248 aa24.01■■□□□ 1.43
CLN6-204ENST00000564752 AOC3Q16853 763 aa24.01■■□□□ 1.43
CLN6-204ENST00000564752 CNTROBQ8N137 903 aa24.01■■□□□ 1.43
CLN6-204ENST00000564752 SUPT20HQ8NEM7 779 aa24.01■■□□□ 1.43
CLN6-204ENST00000564752 ISCA1Q9BUE6 129 aa24.01■■□□□ 1.43
CLN6-204ENST00000564752 HYPKQ9NX55 129 aa24.01■■□□□ 1.43
CLN6-204ENST00000564752 TMEM88BA6NKF7 163 aa24■■□□□ 1.43
CLN6-204ENST00000564752 ANP32CO43423 234 aa24■■□□□ 1.43
CLN6-204ENST00000564752 LMOD1P29536 600 aaPredicted RBP24■■□□□ 1.43
CLN6-204ENST00000564752 SCNN1DP51172 638 aa24■■□□□ 1.43
CLN6-204ENST00000564752 GRAPQ13588 217 aa24■■□□□ 1.43
CLN6-204ENST00000564752 MAP1SQ66K74 1059 aaPredicted RBP24■■□□□ 1.43
CLN6-204ENST00000564752 GRAPLQ8TC17 118 aaPredicted RBP24■■□□□ 1.43
CLN6-204ENST00000564752 EPS15P42566 896 aa23.99■■□□□ 1.43
CLN6-204ENST00000564752 DPP8Q6V1X1 898 aaPredicted RBP23.99■■□□□ 1.43
CLN6-204ENST00000564752 MPNDQ8N594 471 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms