RNA–Protein interactions for RNA: ENST00000564745.1

CDH1-207, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-207ENST00000564745 HIF1AQ16665 826 aa8.14□□□□□ -1.11
CDH1-207ENST00000564745 EAPPQ56P03 285 aaPredicted RBP8.14□□□□□ -1.11
CDH1-207ENST00000564745 CRISPLD1Q9H336 500 aa8.14□□□□□ -1.11
CDH1-207ENST00000564745 RNF19AQ9NV58 838 aa8.14□□□□□ -1.11
CDH1-207ENST00000564745 ANKIB1Q9P2G1 1089 aa8.14□□□□□ -1.11
CDH1-207ENST00000564745 WWC3Q9ULE0 1092 aa8.14□□□□□ -1.11
CDH1-207ENST00000564745 PLCB3Q01970 1234 aa8.13□□□□□ -1.11
CDH1-207ENST00000564745 CMTR1Q8N1G2 835 aaKnown RBP8.13□□□□□ -1.11
CDH1-207ENST00000564745 DMRTB1Q96MA1 342 aa8.13□□□□□ -1.11
CDH1-207ENST00000564745 ZCCHC2Q9C0B9 1178 aaKnown RBP8.13□□□□□ -1.11
CDH1-207ENST00000564745 CUEDC1Q9NWM3 386 aaPredicted RBP8.13□□□□□ -1.11
CDH1-207ENST00000564745 RTCBQ9Y3I0 505 aaKnown RBP8.13□□□□□ -1.11
CDH1-207ENST00000564745 KCNMB2Q9Y691 235 aa8.13□□□□□ -1.11
CDH1-207ENST00000564745 GJA3Q9Y6H8 435 aa8.13□□□□□ -1.11
CDH1-207ENST00000564745 E9PSI1 815 aa8.12□□□□□ -1.11
CDH1-207ENST00000564745 ARSDP51689 593 aa8.12□□□□□ -1.11
CDH1-207ENST00000564745 PDE3BQ13370 1112 aa8.12□□□□□ -1.11
CDH1-207ENST00000564745 ORC1Q13415 861 aa8.12□□□□□ -1.11
CDH1-207ENST00000564745 RIPOR1Q6ZS17 1223 aa8.12□□□□□ -1.11
CDH1-207ENST00000564745 PIK3R5Q8WYR1 880 aa8.12□□□□□ -1.11
CDH1-207ENST00000564745 CEP63Q96MT8 703 aa8.12□□□□□ -1.11
CDH1-207ENST00000564745 SLC35F4A4IF30 521 aa8.11□□□□□ -1.11
CDH1-207ENST00000564745 USP5P45974 858 aa8.11□□□□□ -1.11
CDH1-207ENST00000564745 COL19A1Q14993 1142 aa8.11□□□□□ -1.11
CDH1-207ENST00000564745 PGBD3Q8N328 593 aa8.11□□□□□ -1.11
CDH1-207ENST00000564745 ALKBH8Q96BT7 664 aaKnown RBP8.11□□□□□ -1.11
CDH1-207ENST00000564745 MRRFQ96E11 262 aaKnown RBP8.11□□□□□ -1.11
CDH1-207ENST00000564745 GMPR2Q9P2T1 348 aaKnown RBP8.11□□□□□ -1.11
CDH1-207ENST00000564745 HCN2Q9UL51 889 aa8.1□□□□□ -1.11
CDH1-207ENST00000564745 LDHBP07195 334 aaKnown RBP8.09□□□□□ -1.11
CDH1-207ENST00000564745 SNRPBP14678 240 aaKnown RBP8.09□□□□□ -1.11
CDH1-207ENST00000564745 PCSK2P16519 638 aa8.09□□□□□ -1.11
CDH1-207ENST00000564745 UBAP2LQ14157 1087 aaKnown RBP8.09□□□□□ -1.11
CDH1-207ENST00000564745 GRIN2CQ14957 1233 aa8.09□□□□□ -1.11
CDH1-207ENST00000564745 DBN1Q16643 649 aa8.09□□□□□ -1.11
CDH1-207ENST00000564745 ZNF326Q5BKZ1 582 aaKnown RBP8.09□□□□□ -1.11
CDH1-207ENST00000564745 NLRP8Q86W28 1048 aa8.09□□□□□ -1.11
CDH1-207ENST00000564745 CCDC155Q8N6L0 562 aa8.09□□□□□ -1.11
CDH1-207ENST00000564745 BRD7Q9NPI1 651 aa8.09□□□□□ -1.11
CDH1-207ENST00000564745 FAM13BQ9NYF5 915 aa8.09□□□□□ -1.11
CDH1-207ENST00000564745 FOXD3Q9UJU5 478 aaPredicted RBP8.09□□□□□ -1.11
CDH1-207ENST00000564745 PNMA6FA0A0J9YX94 578 aa8.08□□□□□ -1.12
CDH1-207ENST00000564745 DCDC2BA2VCK2 349 aa8.08□□□□□ -1.12
CDH1-207ENST00000564745 UBAP1LF5GYI3 381 aa8.08□□□□□ -1.12
CDH1-207ENST00000564745 SFSWAPQ12872 951 aaKnown RBP8.08□□□□□ -1.12
CDH1-207ENST00000564745 EFHC2Q5JST6 749 aa8.08□□□□□ -1.12
CDH1-207ENST00000564745 TRIM47Q96LD4 638 aa8.08□□□□□ -1.12
CDH1-207ENST00000564745 FAM161BQ96MY7 647 aa8.08□□□□□ -1.12
CDH1-207ENST00000564745 CFHR5Q9BXR6 569 aa8.08□□□□□ -1.12
CDH1-207ENST00000564745 STRN4Q9NRL3 753 aa8.08□□□□□ -1.12
CDH1-207ENST00000564745 ENOX2Q16206 610 aaKnown RBP8.07□□□□□ -1.12
CDH1-207ENST00000564745 SAMD5Q5TGI4 173 aa8.07□□□□□ -1.12
CDH1-207ENST00000564745 USPL1Q5W0Q7 1092 aa8.07□□□□□ -1.12
CDH1-207ENST00000564745 CSRNP1Q96S65 589 aa8.07□□□□□ -1.12
CDH1-207ENST00000564745 DUSP9Q99956 384 aaKnown RBP8.07□□□□□ -1.12
CDH1-207ENST00000564745 TMEM63CQ9P1W3 806 aa8.07□□□□□ -1.12
CDH1-207ENST00000564745 EIF1AYO14602 144 aaKnown RBP8.06□□□□□ -1.12
CDH1-207ENST00000564745 ATXN7O15265 892 aaPredicted RBP8.06□□□□□ -1.12
CDH1-207ENST00000564745 XYLBO75191 536 aa8.06□□□□□ -1.12
CDH1-207ENST00000564745 TNFRSF21O75509 655 aa8.06□□□□□ -1.12
CDH1-207ENST00000564745 ZNF438Q7Z4V0 828 aa8.06□□□□□ -1.12
CDH1-207ENST00000564745 TTC16Q8NEE8 873 aa8.06□□□□□ -1.12
CDH1-207ENST00000564745 NUCKS1Q9H1E3 243 aaKnown RBP8.06□□□□□ -1.12
CDH1-207ENST00000564745 SENP2Q9HC62 589 aa8.06□□□□□ -1.12
CDH1-207ENST00000564745 KHNYNO15037 678 aaKnown RBP8.05□□□□□ -1.12
CDH1-207ENST00000564745 EFSO43281 561 aa8.05□□□□□ -1.12
CDH1-207ENST00000564745 BNIP3LO60238 219 aa8.05□□□□□ -1.12
CDH1-207ENST00000564745 ELP3Q9H9T3 547 aa8.05□□□□□ -1.12
CDH1-207ENST00000564745 PARP2Q9UGN5 583 aa8.05□□□□□ -1.12
CDH1-207ENST00000564745 PCDHGC4Q9Y5F7 938 aa8.05□□□□□ -1.12
CDH1-207ENST00000564745 POTECB2RU33 542 aa8.04□□□□□ -1.12
CDH1-207ENST00000564745 PRPF40AO75400 957 aaKnown RBP8.04□□□□□ -1.12
CDH1-207ENST00000564745 RPLP1P05386 114 aaKnown RBP8.04□□□□□ -1.12
CDH1-207ENST00000564745 FAM157BP0CG42 384 aa8.04□□□□□ -1.12
CDH1-207ENST00000564745 MAPTP10636 758 aaKnown RBP8.04□□□□□ -1.12
CDH1-207ENST00000564745 EPB42P16452 691 aa8.04□□□□□ -1.12
CDH1-207ENST00000564745 TNP2Q05952 138 aa8.04□□□□□ -1.12
CDH1-207ENST00000564745 XKR5Q6UX68 686 aa8.04□□□□□ -1.12
CDH1-207ENST00000564745 KRT25Q7Z3Z0 450 aa8.04□□□□□ -1.12
CDH1-207ENST00000564745 TRIM22Q8IYM9 498 aa8.04□□□□□ -1.12
CDH1-207ENST00000564745 KIFC2Q96AC6 838 aa8.04□□□□□ -1.12
CDH1-207ENST00000564745 ZNF837Q96EG3 531 aaPredicted RBP8.04□□□□□ -1.12
CDH1-207ENST00000564745 CNTN3Q9P232 1028 aa8.04□□□□□ -1.12
CDH1-207ENST00000564745 KCNH4Q9UQ05 1017 aa8.04□□□□□ -1.12
CDH1-207ENST00000564745 FNDC3AQ9Y2H6 1198 aaKnown RBP8.04□□□□□ -1.12
CDH1-207ENST00000564745 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.04□□□□□ -1.12
CDH1-207ENST00000564745 SASH3O75995 380 aa8.03□□□□□ -1.12
CDH1-207ENST00000564745 POLR3DP05423 398 aaPredicted RBP8.03□□□□□ -1.12
CDH1-207ENST00000564745 ITGA6P23229 1130 aa8.03□□□□□ -1.12
CDH1-207ENST00000564745 PDE12Q6L8Q7 609 aaKnown RBP8.03□□□□□ -1.12
CDH1-207ENST00000564745 PI16Q6UXB8 463 aa8.03□□□□□ -1.12
CDH1-207ENST00000564745 ABHD17AQ96GS6 310 aa8.03□□□□□ -1.12
CDH1-207ENST00000564745 CHRDQ9H2X0 955 aa8.03□□□□□ -1.12
CDH1-207ENST00000564745 NDFIP2Q9NV92 336 aa8.03□□□□□ -1.12
CDH1-207ENST00000564745 CPNE3O75131 537 aaKnown RBP8.02□□□□□ -1.13
CDH1-207ENST00000564745 EGFRP00533 1210 aa8.02□□□□□ -1.13
CDH1-207ENST00000564745 TARSP26639 723 aaKnown RBP8.02□□□□□ -1.13
CDH1-207ENST00000564745 IRS1P35568 1242 aa8.02□□□□□ -1.13
CDH1-207ENST00000564745 KCNQ4P56696 695 aa8.02□□□□□ -1.13
CDH1-207ENST00000564745 LBRQ14739 615 aaKnown RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms