RNA–Protein interactions for RNA: ENST00000564628.1

NME3-207, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-207ENST00000564628 SYNE4Q8N205 404 aa24.76■■□□□ 1.55
NME3-207ENST00000564628 PSMD1Q99460 953 aa24.76■■□□□ 1.55
NME3-207ENST00000564628 TRIM35Q9UPQ4 493 aa24.76■■□□□ 1.55
NME3-207ENST00000564628 IBTKQ9P2D0 1353 aaPredicted RBP24.76■■□□□ 1.55
NME3-207ENST00000564628 RIC1Q4ADV7 1423 aa24.76■■□□□ 1.55
NME3-207ENST00000564628 MAP3K15Q6ZN16 1313 aa24.75■■□□□ 1.55
NME3-207ENST00000564628 ABCC12Q96J65 1359 aa24.75■■□□□ 1.55
NME3-207ENST00000564628 EPHX2P34913 555 aa24.74■■□□□ 1.55
NME3-207ENST00000564628 EIF4A1P60842 406 aaKnown RBP24.74■■□□□ 1.55
NME3-207ENST00000564628 PNMA8AQ86V59 439 aaPredicted RBP24.74■■□□□ 1.55
NME3-207ENST00000564628 GPC2Q8N158 579 aa24.74■■□□□ 1.55
NME3-207ENST00000564628 NUP98P52948 1817 aa24.74■■□□□ 1.55
NME3-207ENST00000564628 TMEM88BA6NKF7 163 aa24.73■■□□□ 1.55
NME3-207ENST00000564628 HOXA10P31260 410 aaPredicted RBP24.73■■□□□ 1.55
NME3-207ENST00000564628 GRIPAP1Q4V328 841 aa24.73■■□□□ 1.55
NME3-207ENST00000564628 EAPPQ56P03 285 aaPredicted RBP24.73■■□□□ 1.55
NME3-207ENST00000564628 KIF6Q6ZMV9 814 aa24.73■■□□□ 1.55
NME3-207ENST00000564628 NUTM1Q86Y26 1132 aa24.72■■□□□ 1.55
NME3-207ENST00000564628 NGEFQ8N5V2 710 aa24.72■■□□□ 1.55
NME3-207ENST00000564628 JDP2Q8WYK2 163 aa24.72■■□□□ 1.55
NME3-207ENST00000564628 APAF1O14727 1248 aa24.71■■□□□ 1.55
NME3-207ENST00000564628 NEUROD2Q15784 382 aa24.71■■□□□ 1.55
NME3-207ENST00000564628 RNF123Q5XPI4 1314 aa24.7■■□□□ 1.54
NME3-207ENST00000564628 DIEXFQ68CQ4 756 aaKnown RBP24.7■■□□□ 1.54
NME3-207ENST00000564628 TTLL7Q6ZT98 887 aa24.7■■□□□ 1.54
NME3-207ENST00000564628 RPGRQ92834 1020 aaKnown RBP24.7■■□□□ 1.54
NME3-207ENST00000564628 BABAM1Q9NWV8 329 aa24.7■■□□□ 1.54
NME3-207ENST00000564628 CLEC11AQ9Y240 323 aa24.7■■□□□ 1.54
NME3-207ENST00000564628 ERBB4Q15303 1308 aa24.69■■□□□ 1.54
NME3-207ENST00000564628 UBN2Q6ZU65 1347 aa24.69■■□□□ 1.54
NME3-207ENST00000564628 ZNF34Q8IZ26 560 aa24.68■■□□□ 1.54
NME3-207ENST00000564628 MYL6BP14649 208 aa24.67■■□□□ 1.54
NME3-207ENST00000564628 VEGFBP49765 207 aa24.67■■□□□ 1.54
NME3-207ENST00000564628 EIF6P56537 245 aaKnown RBP24.67■■□□□ 1.54
NME3-207ENST00000564628 CNTROBQ8N137 903 aa24.67■■□□□ 1.54
NME3-207ENST00000564628 CRAMP1Q96RY5 1269 aa24.67■■□□□ 1.54
NME3-207ENST00000564628 ZBTB3Q9H5J0 574 aa24.67■■□□□ 1.54
NME3-207ENST00000564628 FOXN1O15353 648 aa24.66■■□□□ 1.54
NME3-207ENST00000564628 GPTP24298 496 aa24.66■■□□□ 1.54
NME3-207ENST00000564628 SUSD4Q5VX71 490 aa24.66■■□□□ 1.54
NME3-207ENST00000564628 PRDM10Q9NQV6 1147 aa24.66■■□□□ 1.54
NME3-207ENST00000564628 COL4A5P29400 1685 aa24.66■■□□□ 1.54
NME3-207ENST00000564628 NTSR2O95665 410 aa24.65■■□□□ 1.54
NME3-207ENST00000564628 MAP1SQ66K74 1059 aaPredicted RBP24.65■■□□□ 1.54
NME3-207ENST00000564628 GIGYF2Q6Y7W6 1299 aaKnown RBP24.65■■□□□ 1.54
NME3-207ENST00000564628 RBM17Q96I25 401 aaKnown RBP24.65■■□□□ 1.54
NME3-207ENST00000564628 TSPYL4Q9UJ04 414 aa24.65■■□□□ 1.54
NME3-207ENST00000564628 RASSF10A6NK89 507 aa24.64■■□□□ 1.54
NME3-207ENST00000564628 CHL1O00533 1208 aa24.64■■□□□ 1.54
NME3-207ENST00000564628 AIDAQ96BJ3 306 aa24.64■■□□□ 1.54
NME3-207ENST00000564628 PPEF1O14829 653 aaPredicted RBP24.63■■□□□ 1.53
NME3-207ENST00000564628 NCBP3Q53F19 620 aaKnown RBP24.63■■□□□ 1.53
NME3-207ENST00000564628 PARP10Q53GL7 1025 aa24.63■■□□□ 1.53
NME3-207ENST00000564628 PPP1R42Q7Z4L9 355 aa24.63■■□□□ 1.53
NME3-207ENST00000564628 LMOD1P29536 600 aaPredicted RBP24.62■■□□□ 1.53
NME3-207ENST00000564628 CTCFP49711 727 aaPredicted RBP24.62■■□□□ 1.53
NME3-207ENST00000564628 LARGE2Q8N3Y3 721 aa24.62■■□□□ 1.53
NME3-207ENST00000564628 WBP1LQ9NX94 342 aa24.62■■□□□ 1.53
NME3-207ENST00000564628 GJA3Q9Y6H8 435 aa24.62■■□□□ 1.53
NME3-207ENST00000564628 DEFB115Q30KQ5 88 aa24.61■■□□□ 1.53
NME3-207ENST00000564628 LRP10Q7Z4F1 713 aa24.61■■□□□ 1.53
NME3-207ENST00000564628 LTBP1Q14766 1721 aa24.61■■□□□ 1.53
NME3-207ENST00000564628 SCNN1DP51172 638 aa24.6■■□□□ 1.53
NME3-207ENST00000564628 CCDC27Q2M243 656 aa24.6■■□□□ 1.53
NME3-207ENST00000564628 NLRP3Q96P20 1036 aa24.6■■□□□ 1.53
NME3-207ENST00000564628 VPS33BQ9H267 617 aa24.6■■□□□ 1.53
NME3-207ENST00000564628 ZNF853P0CG23 659 aa24.59■■□□□ 1.53
NME3-207ENST00000564628 SLC10A5Q5PT55 438 aa24.59■■□□□ 1.53
NME3-207ENST00000564628 C3orf67Q6ZVT6 689 aa24.59■■□□□ 1.53
NME3-207ENST00000564628 CFAP44Q96MT7 982 aa24.59■■□□□ 1.53
NME3-207ENST00000564628 DDX21Q9NR30 783 aaKnown RBP eCLIP24.59■■□□□ 1.53
NME3-207ENST00000564628 PDIA6Q15084 440 aa24.58■■□□□ 1.53
NME3-207ENST00000564628 NIM1KQ8IY84 436 aa24.58■■□□□ 1.53
NME3-207ENST00000564628 TMX4Q9H1E5 349 aaPredicted RBP24.58■■□□□ 1.53
NME3-207ENST00000564628 ATP6V0A2Q9Y487 856 aa24.58■■□□□ 1.53
NME3-207ENST00000564628 CALD1Q05682 793 aaKnown RBP24.57■■□□□ 1.52
NME3-207ENST00000564628 USP50Q70EL3 339 aaPredicted RBP24.57■■□□□ 1.52
NME3-207ENST00000564628 UTP14AQ9BVJ6 771 aaKnown RBP24.57■■□□□ 1.52
NME3-207ENST00000564628 CCER2I3L3R5 266 aa24.56■■□□□ 1.52
NME3-207ENST00000564628 EPS15P42566 896 aa24.56■■□□□ 1.52
NME3-207ENST00000564628 IFT57Q9NWB7 429 aa24.56■■□□□ 1.52
NME3-207ENST00000564628 ABT1Q9ULW3 272 aaKnown RBP24.56■■□□□ 1.52
NME3-207ENST00000564628 WDR33Q9C0J8 1336 aaKnown RBP24.56■■□□□ 1.52
NME3-207ENST00000564628 TCERG1O14776 1098 aaKnown RBP24.55■■□□□ 1.52
NME3-207ENST00000564628 PPIP5K2O43314 1243 aa24.55■■□□□ 1.52
NME3-207ENST00000564628 SLC51AQ86UW1 340 aa24.55■■□□□ 1.52
NME3-207ENST00000564628 FAM9BQ8IZU0 186 aa24.55■■□□□ 1.52
NME3-207ENST00000564628 EIF2S2P20042 333 aaKnown RBP24.54■■□□□ 1.52
NME3-207ENST00000564628 MAP2K1Q02750 393 aaPredicted RBP24.54■■□□□ 1.52
NME3-207ENST00000564628 SUPT20HQ8NEM7 779 aa24.54■■□□□ 1.52
NME3-207ENST00000564628 RTFDC1Q9BY42 306 aaPredicted RBP24.54■■□□□ 1.52
NME3-207ENST00000564628 ABCC4O15439 1325 aa24.54■■□□□ 1.52
NME3-207ENST00000564628 HSP90AB3PQ58FF7 597 aa24.53■■□□□ 1.52
NME3-207ENST00000564628 WWC1Q8IX03 1113 aa24.53■■□□□ 1.52
NME3-207ENST00000564628 MBIPQ9NS73 344 aa24.53■■□□□ 1.52
NME3-207ENST00000564628 LAS1LQ9Y4W2 734 aaKnown RBP24.53■■□□□ 1.52
NME3-207ENST00000564628 THSD7BQ9C0I4 1608 aa24.53■■□□□ 1.52
NME3-207ENST00000564628 ANKRD36CQ5JPF3 1778 aa24.52■■□□□ 1.52
NME3-207ENST00000564628 BBOX1O75936 387 aa24.52■■□□□ 1.52
NME3-207ENST00000564628 LBX1P52954 281 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms