RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 PDRG1Q9NUG6 133 aa9.11□□□□□ -0.95
ATXN3-249ENST00000564606 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.11□□□□□ -0.95
ATXN3-249ENST00000564606 SPG7Q9UQ90 795 aa9.11□□□□□ -0.95
ATXN3-249ENST00000564606 CEP170BQ9Y4F5 1589 aaPredicted RBP9.11□□□□□ -0.95
ATXN3-249ENST00000564606 PIK3C2AO00443 1686 aa9.1□□□□□ -0.95
ATXN3-249ENST00000564606 PHRF1Q9P1Y6 1649 aaKnown RBP9.1□□□□□ -0.95
ATXN3-249ENST00000564606 PI4KAP2A4QPH2 592 aa9.1□□□□□ -0.95
ATXN3-249ENST00000564606 EIF2S2P20042 333 aaKnown RBP9.1□□□□□ -0.95
ATXN3-249ENST00000564606 KRT85P78386 507 aa9.1□□□□□ -0.95
ATXN3-249ENST00000564606 ATL3Q6DD88 541 aa9.1□□□□□ -0.95
ATXN3-249ENST00000564606 ZGPATQ8N5A5 531 aaKnown RBP9.1□□□□□ -0.95
ATXN3-249ENST00000564606 PI4KAP1Q8N8J0 262 aa9.1□□□□□ -0.95
ATXN3-249ENST00000564606 KCNV2Q8TDN2 545 aa9.1□□□□□ -0.95
ATXN3-249ENST00000564606 PDCL3Q9H2J4 239 aa9.1□□□□□ -0.95
ATXN3-249ENST00000564606 DDX21Q9NR30 783 aaKnown RBP eCLIP9.1□□□□□ -0.95
ATXN3-249ENST00000564606 USP25Q9UHP3 1055 aa9.1□□□□□ -0.95
ATXN3-249ENST00000564606 UTYO14607 1347 aa9.09□□□□□ -0.95
ATXN3-249ENST00000564606 MED1Q15648 1581 aaPredicted RBP9.09□□□□□ -0.95
ATXN3-249ENST00000564606 SYCE3A1L190 88 aa9.09□□□□□ -0.95
ATXN3-249ENST00000564606 RNMTO43148 476 aaKnown RBP9.09□□□□□ -0.95
ATXN3-249ENST00000564606 F13A1P00488 732 aa9.09□□□□□ -0.95
ATXN3-249ENST00000564606 CCDC192P0DO97 292 aa9.09□□□□□ -0.95
ATXN3-249ENST00000564606 KCNA6P17658 529 aa9.09□□□□□ -0.95
ATXN3-249ENST00000564606 PRIM1P49642 420 aaKnown RBP9.09□□□□□ -0.95
ATXN3-249ENST00000564606 PI4K2BQ8TCG2 481 aa9.09□□□□□ -0.95
ATXN3-249ENST00000564606 RAPGEF4Q8WZA2 1011 aa9.09□□□□□ -0.95
ATXN3-249ENST00000564606 KCNB2Q92953 911 aa9.09□□□□□ -0.95
ATXN3-249ENST00000564606 LTV1Q96GA3 475 aaPredicted RBP9.09□□□□□ -0.95
ATXN3-249ENST00000564606 PRIMPOLQ96LW4 560 aa9.09□□□□□ -0.95
ATXN3-249ENST00000564606 SNX14Q9Y5W7 946 aa9.09□□□□□ -0.95
ATXN3-249ENST00000564606 ELP1O95163 1332 aa9.08□□□□□ -0.96
ATXN3-249ENST00000564606 ERBB4Q15303 1308 aa9.08□□□□□ -0.96
ATXN3-249ENST00000564606 GRM8O00222 908 aa9.08□□□□□ -0.96
ATXN3-249ENST00000564606 DYNC1I1O14576 645 aa9.08□□□□□ -0.96
ATXN3-249ENST00000564606 CASTP20810 708 aaKnown RBP9.08□□□□□ -0.96
ATXN3-249ENST00000564606 BLOC1S2Q6QNY1 142 aa9.08□□□□□ -0.96
ATXN3-249ENST00000564606 RUFY3Q7L099 469 aa9.08□□□□□ -0.96
ATXN3-249ENST00000564606 ILDR1Q86SU0 546 aaPredicted RBP9.08□□□□□ -0.96
ATXN3-249ENST00000564606 GPT2Q8TD30 523 aa9.08□□□□□ -0.96
ATXN3-249ENST00000564606 LSG1Q9H089 658 aaKnown RBP9.08□□□□□ -0.96
ATXN3-249ENST00000564606 ZSCAN16Q9H4T2 348 aaPredicted RBP9.08□□□□□ -0.96
ATXN3-249ENST00000564606 ZSWIM6Q9HCJ5 1215 aa9.08□□□□□ -0.96
ATXN3-249ENST00000564606 IL1RAPL2Q9NP60 686 aa9.08□□□□□ -0.96
ATXN3-249ENST00000564606 DDX19AQ9NUU7 478 aaKnown RBP9.08□□□□□ -0.96
ATXN3-249ENST00000564606 CHPF2Q9P2E5 772 aa9.08□□□□□ -0.96
ATXN3-249ENST00000564606 CFAP45Q9UL16 551 aa9.08□□□□□ -0.96
ATXN3-249ENST00000564606 ABCC6O95255 1503 aa9.08□□□□□ -0.96
ATXN3-249ENST00000564606 FER1L4A9Z1Z3 1794 aa9.08□□□□□ -0.96
ATXN3-249ENST00000564606 COL15A1P39059 1388 aa9.08□□□□□ -0.96
ATXN3-249ENST00000564606 HAX1O00165 279 aa9.07□□□□□ -0.96
ATXN3-249ENST00000564606 CTAGE5O15320 804 aa9.07□□□□□ -0.96
ATXN3-249ENST00000564606 GIGYF1O75420 1035 aaPredicted RBP9.07□□□□□ -0.96
ATXN3-249ENST00000564606 TATP17735 454 aaPredicted RBP9.07□□□□□ -0.96
ATXN3-249ENST00000564606 TSGA10IPQ3SY00 556 aa9.07□□□□□ -0.96
ATXN3-249ENST00000564606 ESCO1Q5FWF5 840 aa9.07□□□□□ -0.96
ATXN3-249ENST00000564606 SASS6Q6UVJ0 657 aa9.07□□□□□ -0.96
ATXN3-249ENST00000564606 CWC27Q6UX04 472 aaKnown RBP9.07□□□□□ -0.96
ATXN3-249ENST00000564606 RIC3Q7Z5B4 369 aa9.07□□□□□ -0.96
ATXN3-249ENST00000564606 USP48Q86UV5 1035 aa9.07□□□□□ -0.96
ATXN3-249ENST00000564606 AACSQ86V21 672 aa9.07□□□□□ -0.96
ATXN3-249ENST00000564606 NUTM1Q86Y26 1132 aa9.07□□□□□ -0.96
ATXN3-249ENST00000564606 TTC5Q8N0Z6 440 aa9.07□□□□□ -0.96
ATXN3-249ENST00000564606 UBE2Q2Q8WVN8 375 aa9.07□□□□□ -0.96
ATXN3-249ENST00000564606 NECTIN2Q92692 538 aa9.07□□□□□ -0.96
ATXN3-249ENST00000564606 TTC14Q96N46 770 aa9.07□□□□□ -0.96
ATXN3-249ENST00000564606 RBSNQ9H1K0 784 aa9.07□□□□□ -0.96
ATXN3-249ENST00000564606 SNRKQ9NRH2 765 aa9.07□□□□□ -0.96
ATXN3-249ENST00000564606 TMEM63CQ9P1W3 806 aa9.07□□□□□ -0.96
ATXN3-249ENST00000564606 MAP3K2Q9Y2U5 619 aa9.07□□□□□ -0.96
ATXN3-249ENST00000564606 ZDHHC9Q9Y397 364 aa9.07□□□□□ -0.96
ATXN3-249ENST00000564606 LMO7Q8WWI1 1683 aa9.07□□□□□ -0.96
ATXN3-249ENST00000564606 NRDCO43847 1150 aa9.06□□□□□ -0.96
ATXN3-249ENST00000564606 GCP02774 474 aa9.06□□□□□ -0.96
ATXN3-249ENST00000564606 TIE1P35590 1138 aa9.06□□□□□ -0.96
ATXN3-249ENST00000564606 AK2P54819 239 aa9.06□□□□□ -0.96
ATXN3-249ENST00000564606 DNTTIP2Q5QJE6 756 aaKnown RBP9.06□□□□□ -0.96
ATXN3-249ENST00000564606 LARP1BQ659C4 914 aaKnown RBP9.06□□□□□ -0.96
ATXN3-249ENST00000564606 DPY19L2Q6NUT2 758 aa9.06□□□□□ -0.96
ATXN3-249ENST00000564606 ARHGEF25Q86VW2 580 aa9.06□□□□□ -0.96
ATXN3-249ENST00000564606 RGS22Q8NE09 1264 aa9.06□□□□□ -0.96
ATXN3-249ENST00000564606 JAKMIP1Q96N16 626 aaKnown RBP9.06□□□□□ -0.96
ATXN3-249ENST00000564606 LLPHQ9BRT6 129 aaKnown RBP9.06□□□□□ -0.96
ATXN3-249ENST00000564606 UPF3BQ9BZI7 483 aaKnown RBP9.06□□□□□ -0.96
ATXN3-249ENST00000564606 PHAXQ9H814 394 aaKnown RBP9.06□□□□□ -0.96
ATXN3-249ENST00000564606 NWD1Q149M9 1564 aa9.06□□□□□ -0.96
ATXN3-249ENST00000564606 MST1RQ04912 1400 aa9.05□□□□□ -0.96
ATXN3-249ENST00000564606 HEG1Q9ULI3 1381 aa9.05□□□□□ -0.96
ATXN3-249ENST00000564606 SYT1P21579 422 aa9.05□□□□□ -0.96
ATXN3-249ENST00000564606 NBPF6Q5VWK0 638 aa9.05□□□□□ -0.96
ATXN3-249ENST00000564606 MAP4K1Q92918 833 aa9.05□□□□□ -0.96
ATXN3-249ENST00000564606 NBPF4Q96M43 638 aa9.05□□□□□ -0.96
ATXN3-249ENST00000564606 FSD1Q9BTV5 496 aa9.05□□□□□ -0.96
ATXN3-249ENST00000564606 NFAT5O94916 1531 aa9.05□□□□□ -0.96
ATXN3-249ENST00000564606 NPHP3Q7Z494 1330 aa9.05□□□□□ -0.96
ATXN3-249ENST00000564606 KDM3BQ7LBC6 1761 aa9.04□□□□□ -0.96
ATXN3-249ENST00000564606 KIF1AQ12756 1690 aa9.04□□□□□ -0.96
ATXN3-249ENST00000564606 NEMFO60524 1076 aa9.04□□□□□ -0.96
ATXN3-249ENST00000564606 NBPF7P0C2Y1 421 aaPredicted RBP9.04□□□□□ -0.96
ATXN3-249ENST00000564606 GJB2P29033 226 aa9.04□□□□□ -0.96
ATXN3-249ENST00000564606 CEBPAP49715 358 aaPredicted RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms