RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 COL4A5P29400 1685 aa18.63■□□□□ 0.57
CDR2-204ENST00000564542 TMEM88BA6NKF7 163 aa18.63■□□□□ 0.57
CDR2-204ENST00000564542 MYL6BP14649 208 aa18.63■□□□□ 0.57
CDR2-204ENST00000564542 HOXA10P31260 410 aaPredicted RBP18.63■□□□□ 0.57
CDR2-204ENST00000564542 JDP2Q8WYK2 163 aa18.63■□□□□ 0.57
CDR2-204ENST00000564542 THUMPD2Q9BTF0 503 aaKnown RBP18.63■□□□□ 0.57
CDR2-204ENST00000564542 ERBB4Q15303 1308 aa18.63■□□□□ 0.57
CDR2-204ENST00000564542 GPTP24298 496 aa18.62■□□□□ 0.57
CDR2-204ENST00000564542 PNNQ9H307 717 aaKnown RBP18.62■□□□□ 0.57
CDR2-204ENST00000564542 ZBTB3Q9H5J0 574 aa18.62■□□□□ 0.57
CDR2-204ENST00000564542 CLEC11AQ9Y240 323 aa18.62■□□□□ 0.57
CDR2-204ENST00000564542 MAPK8IP3Q9UPT6 1336 aa18.62■□□□□ 0.57
CDR2-204ENST00000564542 GRIPAP1Q4V328 841 aa18.61■□□□□ 0.57
CDR2-204ENST00000564542 ZNF34Q8IZ26 560 aa18.61■□□□□ 0.57
CDR2-204ENST00000564542 NTSR2O95665 410 aa18.6■□□□□ 0.57
CDR2-204ENST00000564542 SUSD4Q5VX71 490 aa18.6■□□□□ 0.57
CDR2-204ENST00000564542 LTBP1Q14766 1721 aa18.6■□□□□ 0.57
CDR2-204ENST00000564542 PPEF1O14829 653 aaPredicted RBP18.59■□□□□ 0.57
CDR2-204ENST00000564542 VEGFBP49765 207 aa18.59■□□□□ 0.57
CDR2-204ENST00000564542 EIF6P56537 245 aaKnown RBP18.59■□□□□ 0.57
CDR2-204ENST00000564542 MAP1SQ66K74 1059 aaPredicted RBP18.59■□□□□ 0.57
CDR2-204ENST00000564542 GIGYF2Q6Y7W6 1299 aaKnown RBP18.59■□□□□ 0.57
CDR2-204ENST00000564542 RBM17Q96I25 401 aaKnown RBP18.59■□□□□ 0.57
CDR2-204ENST00000564542 CRAMP1Q96RY5 1269 aa18.59■□□□□ 0.57
CDR2-204ENST00000564542 FOXN1O15353 648 aa18.58■□□□□ 0.56
CDR2-204ENST00000564542 PPP1R42Q7Z4L9 355 aa18.58■□□□□ 0.56
CDR2-204ENST00000564542 CNTROBQ8N137 903 aa18.58■□□□□ 0.56
CDR2-204ENST00000564542 TSPYL4Q9UJ04 414 aa18.58■□□□□ 0.56
CDR2-204ENST00000564542 PARP10Q53GL7 1025 aa18.57■□□□□ 0.56
CDR2-204ENST00000564542 LRP10Q7Z4F1 713 aa18.57■□□□□ 0.56
CDR2-204ENST00000564542 LARGE2Q8N3Y3 721 aa18.57■□□□□ 0.56
CDR2-204ENST00000564542 GJA3Q9Y6H8 435 aa18.57■□□□□ 0.56
CDR2-204ENST00000564542 ANKRD36CQ5JPF3 1778 aa18.57■□□□□ 0.56
CDR2-204ENST00000564542 RASSF10A6NK89 507 aa18.56■□□□□ 0.56
CDR2-204ENST00000564542 LMOD1P29536 600 aaPredicted RBP18.56■□□□□ 0.56
CDR2-204ENST00000564542 C3orf67Q6ZVT6 689 aa18.56■□□□□ 0.56
CDR2-204ENST00000564542 AIDAQ96BJ3 306 aa18.56■□□□□ 0.56
CDR2-204ENST00000564542 PRDM10Q9NQV6 1147 aa18.56■□□□□ 0.56
CDR2-204ENST00000564542 SCNN1DP51172 638 aa18.55■□□□□ 0.56
CDR2-204ENST00000564542 SLC51AQ86UW1 340 aa18.55■□□□□ 0.56
CDR2-204ENST00000564542 THSD7BQ9C0I4 1608 aa18.54■□□□□ 0.56
CDR2-204ENST00000564542 CTCFP49711 727 aaPredicted RBP18.54■□□□□ 0.56
CDR2-204ENST00000564542 PDIA6Q15084 440 aa18.54■□□□□ 0.56
CDR2-204ENST00000564542 NIM1KQ8IY84 436 aa18.54■□□□□ 0.56
CDR2-204ENST00000564542 NLRP3Q96P20 1036 aa18.54■□□□□ 0.56
CDR2-204ENST00000564542 UTP14AQ9BVJ6 771 aaKnown RBP18.54■□□□□ 0.56
CDR2-204ENST00000564542 BABAM1Q9NWV8 329 aa18.54■□□□□ 0.56
CDR2-204ENST00000564542 LAMB2P55268 1798 aa18.54■□□□□ 0.56
CDR2-204ENST00000564542 TCERG1O14776 1098 aaKnown RBP18.53■□□□□ 0.56
CDR2-204ENST00000564542 DEFB115Q30KQ5 88 aa18.53■□□□□ 0.56
CDR2-204ENST00000564542 SLC10A5Q5PT55 438 aa18.53■□□□□ 0.56
CDR2-204ENST00000564542 TMX4Q9H1E5 349 aaPredicted RBP18.53■□□□□ 0.56
CDR2-204ENST00000564542 DDX21Q9NR30 783 aaKnown RBP eCLIP18.53■□□□□ 0.56
CDR2-204ENST00000564542 WBP1LQ9NX94 342 aa18.53■□□□□ 0.56
CDR2-204ENST00000564542 ATP6V0A2Q9Y487 856 aa18.53■□□□□ 0.56
CDR2-204ENST00000564542 ABCC4O15439 1325 aa18.52■□□□□ 0.56
CDR2-204ENST00000564542 PPIP5K2O43314 1243 aa18.52■□□□□ 0.56
CDR2-204ENST00000564542 EIF2S2P20042 333 aaKnown RBP18.52■□□□□ 0.56
CDR2-204ENST00000564542 EPS15P42566 896 aa18.52■□□□□ 0.56
CDR2-204ENST00000564542 RIPK4P57078 832 aa18.52■□□□□ 0.56
CDR2-204ENST00000564542 PROSER3Q2NL68 480 aa18.52■□□□□ 0.56
CDR2-204ENST00000564542 VPS33BQ9H267 617 aa18.52■□□□□ 0.56
CDR2-204ENST00000564542 ABT1Q9ULW3 272 aaKnown RBP18.52■□□□□ 0.56
CDR2-204ENST00000564542 LMOD3Q0VAK6 560 aa18.51■□□□□ 0.55
CDR2-204ENST00000564542 USP50Q70EL3 339 aaPredicted RBP18.51■□□□□ 0.55
CDR2-204ENST00000564542 WDR33Q9C0J8 1336 aaKnown RBP18.5■□□□□ 0.55
CDR2-204ENST00000564542 TRPM7Q96QT4 1865 aa18.5■□□□□ 0.55
CDR2-204ENST00000564542 ANXA1P04083 346 aa18.5■□□□□ 0.55
CDR2-204ENST00000564542 AOC3Q16853 763 aa18.5■□□□□ 0.55
CDR2-204ENST00000564542 HSP90AB3PQ58FF7 597 aa18.5■□□□□ 0.55
CDR2-204ENST00000564542 SUPT20HQ8NEM7 779 aa18.5■□□□□ 0.55
CDR2-204ENST00000564542 RTFDC1Q9BY42 306 aaPredicted RBP18.5■□□□□ 0.55
CDR2-204ENST00000564542 TMPOP42166 694 aaKnown RBP18.49■□□□□ 0.55
CDR2-204ENST00000564542 RALBP1Q15311 655 aa18.49■□□□□ 0.55
CDR2-204ENST00000564542 LBX1P52954 281 aa18.48■□□□□ 0.55
CDR2-204ENST00000564542 MAP2K1Q02750 393 aaPredicted RBP18.48■□□□□ 0.55
CDR2-204ENST00000564542 COPS6Q7L5N1 327 aa18.48■□□□□ 0.55
CDR2-204ENST00000564542 NLRP10Q86W26 655 aa18.48■□□□□ 0.55
CDR2-204ENST00000564542 ADARB2Q9NS39 739 aaKnown RBP18.48■□□□□ 0.55
CDR2-204ENST00000564542 GPRC5DQ9NZD1 345 aa18.48■□□□□ 0.55
CDR2-204ENST00000564542 ZNRF3Q9ULT6 936 aa18.48■□□□□ 0.55
CDR2-204ENST00000564542 LRRC37AA6NMS7 1700 aa18.47■□□□□ 0.55
CDR2-204ENST00000564542 BBOX1O75936 387 aa18.47■□□□□ 0.55
CDR2-204ENST00000564542 DPP8Q6V1X1 898 aaPredicted RBP18.47■□□□□ 0.55
CDR2-204ENST00000564542 XAGE3Q8WTP9 111 aa18.47■□□□□ 0.55
CDR2-204ENST00000564542 CDHR2Q9BYE9 1310 aa18.47■□□□□ 0.55
CDR2-204ENST00000564542 HSPA8P11142 646 aaKnown RBP18.46■□□□□ 0.55
CDR2-204ENST00000564542 FMR1Q06787 632 aaKnown RBP eCLIP18.46■□□□□ 0.555e-8■□□□□ 10.1
CDR2-204ENST00000564542 CXCL9Q07325 125 aa18.46■□□□□ 0.55
CDR2-204ENST00000564542 SP8Q8IXZ3 490 aa18.46■□□□□ 0.55
CDR2-204ENST00000564542 DUOX1Q9NRD9 1551 aa18.46■□□□□ 0.55
CDR2-204ENST00000564542 SH3TC1Q8TE82 1336 aa18.46■□□□□ 0.55
CDR2-204ENST00000564542 TRAF5O00463 557 aa18.45■□□□□ 0.54
CDR2-204ENST00000564542 HCLS1P14317 486 aaPredicted RBP18.45■□□□□ 0.54
CDR2-204ENST00000564542 ECE1P42892 770 aa18.45■□□□□ 0.54
CDR2-204ENST00000564542 KIAA2012Q0VF49 1180 aa18.45■□□□□ 0.54
CDR2-204ENST00000564542 AIMP1Q12904 312 aaKnown RBP18.45■□□□□ 0.54
CDR2-204ENST00000564542 TCIRG1Q13488 830 aa18.45■□□□□ 0.54
CDR2-204ENST00000564542 MPNDQ8N594 471 aa18.45■□□□□ 0.54
CDR2-204ENST00000564542 NECTIN2Q92692 538 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms