RNA–Protein interactions for RNA: ENST00000564503.5

CAPN3-212, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-212ENST00000564503 FGD5Q6ZNL6 1462 aa6.51□□□□□ -1.37
CAPN3-212ENST00000564503 SAMD9Q5K651 1589 aa6.5□□□□□ -1.37
CAPN3-212ENST00000564503 TONSLQ96HA7 1378 aa6.5□□□□□ -1.37
CAPN3-212ENST00000564503 SFI1A8K8P3 1242 aa6.5□□□□□ -1.37
CAPN3-212ENST00000564503 NEURL1BA8MQ27 555 aa6.5□□□□□ -1.37
CAPN3-212ENST00000564503 RASA1P20936 1047 aa6.5□□□□□ -1.37
CAPN3-212ENST00000564503 GPAT2Q6NUI2 795 aa6.5□□□□□ -1.37
CAPN3-212ENST00000564503 LRRC69Q6ZNQ3 347 aa6.5□□□□□ -1.37
CAPN3-212ENST00000564503 SIX5Q8N196 739 aa6.5□□□□□ -1.37
CAPN3-212ENST00000564503 DCAF5Q96JK2 942 aa6.5□□□□□ -1.37
CAPN3-212ENST00000564503 BTBD6Q96KE9 485 aa6.5□□□□□ -1.37
CAPN3-212ENST00000564503 CALR3Q96L12 384 aaKnown RBP6.5□□□□□ -1.37
CAPN3-212ENST00000564503 SIN3AQ96ST3 1273 aa6.5□□□□□ -1.37
CAPN3-212ENST00000564503 RRAGCQ9HB90 399 aa6.5□□□□□ -1.37
CAPN3-212ENST00000564503 STRN4Q9NRL3 753 aa6.5□□□□□ -1.37
CAPN3-212ENST00000564503 KLF15Q9UIH9 416 aa6.5□□□□□ -1.37
CAPN3-212ENST00000564503 CASKIN1Q8WXD9 1431 aa6.5□□□□□ -1.37
CAPN3-212ENST00000564503 UACAQ9BZF9 1416 aa6.5□□□□□ -1.37
CAPN3-212ENST00000564503 EFSO43281 561 aa6.49□□□□□ -1.37
CAPN3-212ENST00000564503 EPXP11678 715 aa6.49□□□□□ -1.37
CAPN3-212ENST00000564503 PSMA6P60900 246 aaKnown RBP6.49□□□□□ -1.37
CAPN3-212ENST00000564503 TSEN2Q8NCE0 465 aaKnown RBP6.49□□□□□ -1.37
CAPN3-212ENST00000564503 PPP1R12CQ9BZL4 782 aa6.49□□□□□ -1.37
CAPN3-212ENST00000564503 NEUROD4Q9HD90 331 aa6.49□□□□□ -1.37
CAPN3-212ENST00000564503 MARK1Q9P0L2 795 aa6.49□□□□□ -1.37
CAPN3-212ENST00000564503 CDK11AQ9UQ88 783 aaPredicted RBP6.49□□□□□ -1.37
CAPN3-212ENST00000564503 HCN4Q9Y3Q4 1203 aa6.49□□□□□ -1.37
CAPN3-212ENST00000564503 KDM5BQ9UGL1 1544 aa6.49□□□□□ -1.37
CAPN3-212ENST00000564503 NCOA2Q15596 1464 aa6.48□□□□□ -1.37
CAPN3-212ENST00000564503 CARMIL1Q5VZK9 1371 aa6.48□□□□□ -1.37
CAPN3-212ENST00000564503 HOXB4P17483 251 aaPredicted RBP6.48□□□□□ -1.37
CAPN3-212ENST00000564503 AMPD1P23109 780 aa6.48□□□□□ -1.37
CAPN3-212ENST00000564503 ADH6P28332 368 aa6.48□□□□□ -1.37
CAPN3-212ENST00000564503 LAMC2Q13753 1193 aa6.48□□□□□ -1.37
CAPN3-212ENST00000564503 FAM50AQ14320 339 aaKnown RBP6.48□□□□□ -1.37
CAPN3-212ENST00000564503 C1orf53Q5VUE5 145 aa6.48□□□□□ -1.37
CAPN3-212ENST00000564503 NPM2Q86SE8 214 aaKnown RBP6.48□□□□□ -1.37
CAPN3-212ENST00000564503 MKL2Q9ULH7 1088 aa6.48□□□□□ -1.37
CAPN3-212ENST00000564503 PRR12Q9ULL5 1215 aa6.48□□□□□ -1.37
CAPN3-212ENST00000564503 GPC6Q9Y625 555 aaPredicted RBP6.48□□□□□ -1.37
CAPN3-212ENST00000564503 EHBP1L1Q8N3D4 1523 aa6.48□□□□□ -1.37
CAPN3-212ENST00000564503 DNMBPQ6XZF7 1577 aa6.48□□□□□ -1.37
CAPN3-212ENST00000564503 C21orf2O43822 256 aa6.47□□□□□ -1.37
CAPN3-212ENST00000564503 IGHA1P01876 353 aa6.47□□□□□ -1.37
CAPN3-212ENST00000564503 HIRAP54198 1017 aaPredicted RBP6.47□□□□□ -1.37
CAPN3-212ENST00000564503 PCBP4P57723 403 aaKnown RBP6.47□□□□□ -1.37
CAPN3-212ENST00000564503 POTEAQ6S8J7 498 aa6.47□□□□□ -1.37
CAPN3-212ENST00000564503 LINC00114Q6XXX2 140 aa6.47□□□□□ -1.37
CAPN3-212ENST00000564503 RHPN1Q8TCX5 695 aa6.47□□□□□ -1.37
CAPN3-212ENST00000564503 AVENQ9NQS1 362 aaPredicted RBP6.47□□□□□ -1.37
CAPN3-212ENST00000564503 CHMP3Q9Y3E7 222 aa6.47□□□□□ -1.37
CAPN3-212ENST00000564503 FGD6Q6ZV73 1430 aa6.47□□□□□ -1.37
CAPN3-212ENST00000564503 ATAD2Q6PL18 1390 aa6.46□□□□□ -1.37
CAPN3-212ENST00000564503 ADGBQ8N7X0 1667 aa6.46□□□□□ -1.37
CAPN3-212ENST00000564503 HFM1A2PYH4 1435 aa6.46□□□□□ -1.38
CAPN3-212ENST00000564503 PPP1R12BO60237 982 aaPredicted RBP6.46□□□□□ -1.38
CAPN3-212ENST00000564503 SEC13P55735 322 aa6.46□□□□□ -1.38
CAPN3-212ENST00000564503 GRIN2CQ14957 1233 aa6.46□□□□□ -1.38
CAPN3-212ENST00000564503 PLA2G4EQ3MJ16 856 aa6.46□□□□□ -1.38
CAPN3-212ENST00000564503 ZNF468Q5VIY5 522 aaPredicted RBP6.46□□□□□ -1.38
CAPN3-212ENST00000564503 LARP1Q6PKG0 1096 aaKnown RBP6.46□□□□□ -1.38
CAPN3-212ENST00000564503 FCHSD1Q86WN1 690 aa6.46□□□□□ -1.38
CAPN3-212ENST00000564503 PHACTR1Q9C0D0 580 aa6.46□□□□□ -1.38
CAPN3-212ENST00000564503 SNAPC4Q5SXM2 1469 aa6.46□□□□□ -1.38
CAPN3-212ENST00000564503 CNTLNQ9NXG0 1405 aa6.45□□□□□ -1.38
CAPN3-212ENST00000564503 ITGB2P05107 769 aa6.45□□□□□ -1.38
CAPN3-212ENST00000564503 COL8A1P27658 744 aa6.45□□□□□ -1.38
CAPN3-212ENST00000564503 LMOD1P29536 600 aaPredicted RBP6.45□□□□□ -1.38
CAPN3-212ENST00000564503 SFSWAPQ12872 951 aaKnown RBP6.45□□□□□ -1.38
CAPN3-212ENST00000564503 PTK7Q13308 1070 aa6.45□□□□□ -1.38
CAPN3-212ENST00000564503 CRTC2Q53ET0 693 aaPredicted RBP6.45□□□□□ -1.38
CAPN3-212ENST00000564503 SCG3Q8WXD2 468 aaKnown RBP6.45□□□□□ -1.38
CAPN3-212ENST00000564503 FMN1Q68DA7 1419 aa6.44□□□□□ -1.38
CAPN3-212ENST00000564503 DPYDQ12882 1025 aa6.44□□□□□ -1.38
CAPN3-212ENST00000564503 SUZ12Q15022 739 aaKnown RBP6.44□□□□□ -1.38
CAPN3-212ENST00000564503 CHSY3Q70JA7 882 aa6.44□□□□□ -1.38
CAPN3-212ENST00000564503 STAG2Q8N3U4 1231 aa6.44□□□□□ -1.38
CAPN3-212ENST00000564503 ZNF280CQ8ND82 737 aa6.44□□□□□ -1.38
CAPN3-212ENST00000564503 GAS2L2Q8NHY3 880 aa6.44□□□□□ -1.38
CAPN3-212ENST00000564503 HSH2DQ96JZ2 352 aa6.44□□□□□ -1.38
CAPN3-212ENST00000564503 HINFPQ9BQA5 517 aa6.44□□□□□ -1.38
CAPN3-212ENST00000564503 C2orf49Q9BVC5 232 aaPredicted RBP6.44□□□□□ -1.38
CAPN3-212ENST00000564503 SUV39H2Q9H5I1 410 aa6.44□□□□□ -1.38
CAPN3-212ENST00000564503 VRTNQ9H8Y1 702 aa6.44□□□□□ -1.38
CAPN3-212ENST00000564503 PPP4R2Q9NY27 417 aa6.44□□□□□ -1.38
CAPN3-212ENST00000564503 ANKIB1Q9P2G1 1089 aa6.44□□□□□ -1.38
CAPN3-212ENST00000564503 ZNF777Q9ULD5 760 aaPredicted RBP6.44□□□□□ -1.38
CAPN3-212ENST00000564503 PBRM1Q86U86 1689 aa6.44□□□□□ -1.38
CAPN3-212ENST00000564503 UGGT2Q9NYU1 1516 aa6.44□□□□□ -1.38
CAPN3-212ENST00000564503 FHOD3Q2V2M9 1422 aa6.43□□□□□ -1.38
CAPN3-212ENST00000564503 KRBA1A5PL33 1030 aa6.43□□□□□ -1.38
CAPN3-212ENST00000564503 LGR5O75473 907 aa6.43□□□□□ -1.38
CAPN3-212ENST00000564503 DGKGP49619 791 aa6.43□□□□□ -1.38
CAPN3-212ENST00000564503 HNRNPUQ00839 825 aaKnown RBP eCLIP6.43□□□□□ -1.38
CAPN3-212ENST00000564503 SYT9Q86SS6 491 aa6.43□□□□□ -1.38
CAPN3-212ENST00000564503 ALDH16A1Q8IZ83 802 aa6.43□□□□□ -1.38
CAPN3-212ENST00000564503 CHMP7Q8WUX9 453 aaPredicted RBP6.43□□□□□ -1.38
CAPN3-212ENST00000564503 SUSD3Q96L08 255 aa6.43□□□□□ -1.38
CAPN3-212ENST00000564503 CEP63Q96MT8 703 aa6.43□□□□□ -1.38
CAPN3-212ENST00000564503 SLC30A3Q99726 388 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms