RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 EIF6P56537 245 aaKnown RBP12.45□□□□□ -0.42
CLN6-203ENST00000563917 AIMP1Q12904 312 aaKnown RBP12.45□□□□□ -0.42
CLN6-203ENST00000563917 NECTIN2Q92692 538 aa12.45□□□□□ -0.42
CLN6-203ENST00000563917 CRAMP1Q96RY5 1269 aa12.45□□□□□ -0.42
CLN6-203ENST00000563917 PSMD1Q99460 953 aa12.45□□□□□ -0.42
CLN6-203ENST00000563917 CLEC11AQ9Y240 323 aa12.45□□□□□ -0.42
CLN6-203ENST00000563917 RIC1Q4ADV7 1423 aa12.45□□□□□ -0.42
CLN6-203ENST00000563917 ABCC12Q96J65 1359 aa12.44□□□□□ -0.42
CLN6-203ENST00000563917 RNF123Q5XPI4 1314 aa12.44□□□□□ -0.42
CLN6-203ENST00000563917 UBN2Q6ZU65 1347 aa12.44□□□□□ -0.42
CLN6-203ENST00000563917 POTECB2RU33 542 aa12.44□□□□□ -0.42
CLN6-203ENST00000563917 TCERG1O14776 1098 aaKnown RBP12.44□□□□□ -0.42
CLN6-203ENST00000563917 PPEF1O14829 653 aaPredicted RBP12.44□□□□□ -0.42
CLN6-203ENST00000563917 CALD1Q05682 793 aaKnown RBP12.44□□□□□ -0.42
CLN6-203ENST00000563917 EAPPQ56P03 285 aaPredicted RBP12.44□□□□□ -0.42
CLN6-203ENST00000563917 OLFM4Q6UX06 510 aa12.44□□□□□ -0.42
CLN6-203ENST00000563917 COPS6Q7L5N1 327 aa12.44□□□□□ -0.42
CLN6-203ENST00000563917 LDHDQ86WU2 507 aa12.44□□□□□ -0.42
CLN6-203ENST00000563917 LARGE2Q8N3Y3 721 aa12.44□□□□□ -0.42
CLN6-203ENST00000563917 JMYQ8N9B5 988 aa12.44□□□□□ -0.42
CLN6-203ENST00000563917 L3MBTL3Q96JM7 780 aaPredicted RBP12.44□□□□□ -0.42
CLN6-203ENST00000563917 HACL1Q9UJ83 578 aa12.44□□□□□ -0.42
CLN6-203ENST00000563917 NTSR2O95665 410 aa12.43□□□□□ -0.42
CLN6-203ENST00000563917 LMOD1P29536 600 aaPredicted RBP12.43□□□□□ -0.42
CLN6-203ENST00000563917 HDGFL1Q5TGJ6 251 aa12.43□□□□□ -0.42
CLN6-203ENST00000563917 PNMA8AQ86V59 439 aaPredicted RBP12.43□□□□□ -0.42
CLN6-203ENST00000563917 GPC2Q8N158 579 aa12.43□□□□□ -0.42
CLN6-203ENST00000563917 XAGE3Q8WTP9 111 aa12.43□□□□□ -0.42
CLN6-203ENST00000563917 TAF1DQ9H5J8 278 aaPredicted RBP12.43□□□□□ -0.42
CLN6-203ENST00000563917 DDX21Q9NR30 783 aaKnown RBP eCLIP12.43□□□□□ -0.42
CLN6-203ENST00000563917 CHL1O00533 1208 aa12.42□□□□□ -0.42
CLN6-203ENST00000563917 ANXA1P04083 346 aa12.42□□□□□ -0.42
CLN6-203ENST00000563917 EPHX2P34913 555 aa12.42□□□□□ -0.42
CLN6-203ENST00000563917 SUPT20HQ8NEM7 779 aa12.42□□□□□ -0.42
CLN6-203ENST00000563917 CHMP4AQ9BY43 222 aa12.42□□□□□ -0.42
CLN6-203ENST00000563917 CREBZFQ9NS37 354 aa12.42□□□□□ -0.42
CLN6-203ENST00000563917 TRMT112Q9UI30 125 aaKnown RBP12.42□□□□□ -0.42
CLN6-203ENST00000563917 ADAMTS8Q9UP79 889 aa12.42□□□□□ -0.42
CLN6-203ENST00000563917 GJA3Q9Y6H8 435 aa12.42□□□□□ -0.42
CLN6-203ENST00000563917 SCN4AP35499 1836 aa12.41□□□□□ -0.42
CLN6-203ENST00000563917 ZNF541Q9H0D2 1346 aa12.41□□□□□ -0.42
CLN6-203ENST00000563917 FZD9O00144 591 aa12.41□□□□□ -0.42
CLN6-203ENST00000563917 HOXB7P09629 217 aa12.41□□□□□ -0.42
CLN6-203ENST00000563917 TCIRG1Q13488 830 aa12.41□□□□□ -0.42
CLN6-203ENST00000563917 PDIA6Q15084 440 aa12.41□□□□□ -0.42
CLN6-203ENST00000563917 PROSER3Q2NL68 480 aa12.41□□□□□ -0.42
CLN6-203ENST00000563917 SLC10A5Q5PT55 438 aa12.41□□□□□ -0.42
CLN6-203ENST00000563917 DDX46Q7L014 1031 aaKnown RBP12.41□□□□□ -0.42
CLN6-203ENST00000563917 NIM1KQ8IY84 436 aa12.41□□□□□ -0.42
CLN6-203ENST00000563917 DBF4Q9UBU7 674 aaPredicted RBP12.41□□□□□ -0.42
CLN6-203ENST00000563917 SH3TC1Q8TE82 1336 aa12.4□□□□□ -0.42
CLN6-203ENST00000563917 PPIP5K2O43314 1243 aa12.4□□□□□ -0.42
CLN6-203ENST00000563917 BBOX1O75936 387 aa12.4□□□□□ -0.42
CLN6-203ENST00000563917 NLRP10Q86W26 655 aa12.4□□□□□ -0.42
CLN6-203ENST00000563917 CFAP44Q96MT7 982 aa12.4□□□□□ -0.42
CLN6-203ENST00000563917 PRKRIP1Q9H875 184 aaPredicted RBP12.4□□□□□ -0.42
CLN6-203ENST00000563917 HYPKQ9NX55 129 aa12.4□□□□□ -0.42
CLN6-203ENST00000563917 CHPF2Q9P2E5 772 aa12.4□□□□□ -0.42
CLN6-203ENST00000563917 TRIM35Q9UPQ4 493 aa12.4□□□□□ -0.42
CLN6-203ENST00000563917 POTEIP0CG38 1075 aa12.39□□□□□ -0.43
CLN6-203ENST00000563917 POTEJP0CG39 1038 aa12.39□□□□□ -0.43
CLN6-203ENST00000563917 ANKRD13DQ6ZTN6 518 aa12.39□□□□□ -0.43
CLN6-203ENST00000563917 LRP10Q7Z4F1 713 aa12.39□□□□□ -0.43
CLN6-203ENST00000563917 VPS33BQ9H267 617 aa12.39□□□□□ -0.43
CLN6-203ENST00000563917 ATP6V0A2Q9Y487 856 aa12.39□□□□□ -0.43
CLN6-203ENST00000563917 TMEM88BA6NKF7 163 aa12.38□□□□□ -0.43
CLN6-203ENST00000563917 HCLS1P14317 486 aaPredicted RBP12.38□□□□□ -0.43
CLN6-203ENST00000563917 HSP90B1P14625 803 aaKnown RBP12.38□□□□□ -0.43
CLN6-203ENST00000563917 GNAI1P63096 354 aa12.38□□□□□ -0.43
CLN6-203ENST00000563917 DPP8Q6V1X1 898 aaPredicted RBP12.38□□□□□ -0.43
CLN6-203ENST00000563917 TMC4Q7Z404 712 aa12.38□□□□□ -0.43
CLN6-203ENST00000563917 PLBD2Q8NHP8 589 aa12.38□□□□□ -0.43
CLN6-203ENST00000563917 ABCC4O15439 1325 aa12.37□□□□□ -0.43
CLN6-203ENST00000563917 GOLGA2Q08379 1002 aa12.37□□□□□ -0.43
CLN6-203ENST00000563917 KRT24Q2M2I5 525 aa12.37□□□□□ -0.43
CLN6-203ENST00000563917 DUSP27Q5VZP5 1158 aa12.37□□□□□ -0.43
CLN6-203ENST00000563917 SP8Q8IXZ3 490 aa12.37□□□□□ -0.43
CLN6-203ENST00000563917 MPNDQ8N594 471 aa12.37□□□□□ -0.43
CLN6-203ENST00000563917 MKRN1Q9UHC7 482 aaKnown RBP12.37□□□□□ -0.43
CLN6-203ENST00000563917 APAF1O14727 1248 aa12.36□□□□□ -0.43
CLN6-203ENST00000563917 HSPA1AP0DMV8 641 aaKnown RBP12.36□□□□□ -0.43
CLN6-203ENST00000563917 HSPA1BP0DMV9 641 aaKnown RBP12.36□□□□□ -0.43
CLN6-203ENST00000563917 GRAPQ13588 217 aa12.36□□□□□ -0.43
CLN6-203ENST00000563917 C3orf67Q6ZVT6 689 aa12.36□□□□□ -0.43
CLN6-203ENST00000563917 RIC3Q7Z5B4 369 aa12.36□□□□□ -0.43
CLN6-203ENST00000563917 CNTROBQ8N137 903 aa12.36□□□□□ -0.43
CLN6-203ENST00000563917 GRAPLQ8TC17 118 aaPredicted RBP12.36□□□□□ -0.43
CLN6-203ENST00000563917 IFT57Q9NWB7 429 aa12.36□□□□□ -0.43
CLN6-203ENST00000563917 ANKRD36CQ5JPF3 1778 aa12.35□□□□□ -0.43
CLN6-203ENST00000563917 AOC3Q16853 763 aa12.35□□□□□ -0.43
CLN6-203ENST00000563917 MAP1SQ66K74 1059 aaPredicted RBP12.35□□□□□ -0.43
CLN6-203ENST00000563917 USP50Q70EL3 339 aaPredicted RBP12.35□□□□□ -0.43
CLN6-203ENST00000563917 AIDAQ96BJ3 306 aa12.35□□□□□ -0.43
CLN6-203ENST00000563917 BCL2L13Q9BXK5 485 aa12.35□□□□□ -0.43
CLN6-203ENST00000563917 MBIPQ9NS73 344 aa12.35□□□□□ -0.43
CLN6-203ENST00000563917 ZNRF3Q9ULT6 936 aa12.35□□□□□ -0.43
CLN6-203ENST00000563917 ATP5J2-PTCD1G3V325 749 aa12.34□□□□□ -0.43
CLN6-203ENST00000563917 DDX58O95786 925 aaKnown RBP12.34□□□□□ -0.43
CLN6-203ENST00000563917 TNIP1Q15025 636 aa12.34□□□□□ -0.43
CLN6-203ENST00000563917 TNS4Q8IZW8 715 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms