RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-208ENST00000563911 RHBDD1Q8TEB9 315 aa9.51□□□□□ -0.89
HERPUD1-208ENST00000563911 L3MBTL2Q969R5 705 aa9.51□□□□□ -0.89
HERPUD1-208ENST00000563911 NGLY1Q96IV0 654 aa9.51□□□□□ -0.89
HERPUD1-208ENST00000563911 GRIP2Q9C0E4 1043 aa9.51□□□□□ -0.89
HERPUD1-208ENST00000563911 HCN4Q9Y3Q4 1203 aa9.51□□□□□ -0.89
HERPUD1-208ENST00000563911 GFRA3O60609 400 aa9.5□□□□□ -0.89
HERPUD1-208ENST00000563911 SF3B2Q13435 895 aaKnown RBP9.5□□□□□ -0.89
HERPUD1-208ENST00000563911 PKDCCQ504Y2 493 aa9.5□□□□□ -0.89
HERPUD1-208ENST00000563911 C16orf46Q6P387 395 aa9.5□□□□□ -0.89
HERPUD1-208ENST00000563911 ZDHHC1Q8WTX9 485 aa9.5□□□□□ -0.89
HERPUD1-208ENST00000563911 SAP130Q9H0E3 1048 aa9.5□□□□□ -0.89
HERPUD1-208ENST00000563911 PTPRTO14522 1441 aa9.49□□□□□ -0.89
HERPUD1-208ENST00000563911 C9orf84Q5VXU9 1444 aa9.49□□□□□ -0.89
HERPUD1-208ENST00000563911 EML1O00423 815 aa9.49□□□□□ -0.89
HERPUD1-208ENST00000563911 AVPP01185 164 aa9.49□□□□□ -0.89
HERPUD1-208ENST00000563911 SCARF1Q14162 830 aa9.49□□□□□ -0.89
HERPUD1-208ENST00000563911 SH3PXD2AQ5TCZ1 1133 aa9.49□□□□□ -0.89
HERPUD1-208ENST00000563911 HELQQ8TDG4 1101 aa9.49□□□□□ -0.89
HERPUD1-208ENST00000563911 DGAT1O75907 488 aa9.48□□□□□ -0.89
HERPUD1-208ENST00000563911 BMP1P13497 986 aa9.47□□□□□ -0.89
HERPUD1-208ENST00000563911 PHKA2P46019 1235 aa9.47□□□□□ -0.89
HERPUD1-208ENST00000563911 PLA2G4AP47712 749 aa9.47□□□□□ -0.89
HERPUD1-208ENST00000563911 C4orf17Q53FE4 359 aa9.47□□□□□ -0.89
HERPUD1-208ENST00000563911 COX20Q5RI15 118 aa9.47□□□□□ -0.89
HERPUD1-208ENST00000563911 FOXD4L5Q5VV16 416 aaPredicted RBP9.47□□□□□ -0.89
HERPUD1-208ENST00000563911 PRICKLE2Q7Z3G6 844 aa9.47□□□□□ -0.89
HERPUD1-208ENST00000563911 ALDH16A1Q8IZ83 802 aa9.47□□□□□ -0.89
HERPUD1-208ENST00000563911 FAM9AQ8IZU1 332 aaPredicted RBP9.47□□□□□ -0.89
HERPUD1-208ENST00000563911 ZNF295-AS1Q8N0V1 137 aa9.47□□□□□ -0.89
HERPUD1-208ENST00000563911 RGS22Q8NE09 1264 aa9.47□□□□□ -0.89
HERPUD1-208ENST00000563911 AIDAQ96BJ3 306 aa9.47□□□□□ -0.89
HERPUD1-208ENST00000563911 QTRT2Q9H974 415 aaKnown RBP9.47□□□□□ -0.89
HERPUD1-208ENST00000563911 UHRF1BP1Q6BDS2 1440 aa9.47□□□□□ -0.89
HERPUD1-208ENST00000563911 CFAP74Q9C0B2 1584 aa9.46□□□□□ -0.89
HERPUD1-208ENST00000563911 NRG2O14511 850 aaPredicted RBP9.46□□□□□ -0.9
HERPUD1-208ENST00000563911 HIRAP54198 1017 aaPredicted RBP9.46□□□□□ -0.9
HERPUD1-208ENST00000563911 CTC1Q2NKJ3 1217 aa9.46□□□□□ -0.9
HERPUD1-208ENST00000563911 POTEAQ6S8J7 498 aa9.46□□□□□ -0.9
HERPUD1-208ENST00000563911 PHACTR1Q9C0D0 580 aa9.46□□□□□ -0.9
HERPUD1-208ENST00000563911 KIF14Q15058 1648 aa9.45□□□□□ -0.9
HERPUD1-208ENST00000563911 C3P01024 1663 aa9.45□□□□□ -0.9
HERPUD1-208ENST00000563911 AXIN1O15169 862 aa9.45□□□□□ -0.9
HERPUD1-208ENST00000563911 FAM13AO94988 1023 aa9.45□□□□□ -0.9
HERPUD1-208ENST00000563911 MARSP56192 900 aaKnown RBP9.45□□□□□ -0.9
HERPUD1-208ENST00000563911 POU4F2Q12837 409 aa9.45□□□□□ -0.9
HERPUD1-208ENST00000563911 EFCAB2Q5VUJ9 269 aa9.45□□□□□ -0.9
HERPUD1-208ENST00000563911 RNF217Q8TC41 542 aa9.45□□□□□ -0.9
HERPUD1-208ENST00000563911 ZNF335Q9H4Z2 1342 aaPredicted RBP9.45□□□□□ -0.9
HERPUD1-208ENST00000563911 NCOA1Q15788 1441 aa9.45□□□□□ -0.9
HERPUD1-208ENST00000563911 DIP2CQ9Y2E4 1556 aa9.45□□□□□ -0.9
HERPUD1-208ENST00000563911 FIGNL2A6NMB9 653 aa9.44□□□□□ -0.9
HERPUD1-208ENST00000563911 TTLL8A6PVC2 850 aa9.44□□□□□ -0.9
HERPUD1-208ENST00000563911 LYSMD3Q7Z3D4 306 aa9.44□□□□□ -0.9
HERPUD1-208ENST00000563911 MYO19Q96H55 970 aa9.44□□□□□ -0.9
HERPUD1-208ENST00000563911 STIM2Q9P246 746 aa9.44□□□□□ -0.9
HERPUD1-208ENST00000563911 LRFN2Q9ULH4 789 aa9.44□□□□□ -0.9
HERPUD1-208ENST00000563911 TRAPPC8Q9Y2L5 1435 aa9.44□□□□□ -0.9
HERPUD1-208ENST00000563911 KDM5CP41229 1560 aa9.44□□□□□ -0.9
HERPUD1-208ENST00000563911 ABCA6Q8N139 1617 aa9.43□□□□□ -0.9
HERPUD1-208ENST00000563911 SPATA31C2B4DYI2 1134 aa9.43□□□□□ -0.9
HERPUD1-208ENST00000563911 MPSTP25325 297 aa9.43□□□□□ -0.9
HERPUD1-208ENST00000563911 TXLNAP40222 546 aa9.43□□□□□ -0.9
HERPUD1-208ENST00000563911 SMCPP49901 116 aaPredicted RBP9.43□□□□□ -0.9
HERPUD1-208ENST00000563911 RTN1Q16799 776 aa9.43□□□□□ -0.9
HERPUD1-208ENST00000563911 NBPF1Q3BBV0 1214 aa9.43□□□□□ -0.9
HERPUD1-208ENST00000563911 NBPF10Q6P3W6 841 aaKnown RBP9.43□□□□□ -0.9
HERPUD1-208ENST00000563911 TRIM46Q7Z4K8 759 aa9.43□□□□□ -0.9
HERPUD1-208ENST00000563911 FOXD4L4Q8WXT5 416 aaPredicted RBP9.43□□□□□ -0.9
HERPUD1-208ENST00000563911 BRD2P25440 801 aaKnown RBP9.42□□□□□ -0.9
HERPUD1-208ENST00000563911 DGKZQ13574 1117 aa9.42□□□□□ -0.9
HERPUD1-208ENST00000563911 AAMPQ13685 434 aa9.42□□□□□ -0.9
HERPUD1-208ENST00000563911 ECM1Q16610 540 aa9.42□□□□□ -0.9
HERPUD1-208ENST00000563911 C11orf91Q3C1V1 193 aa9.42□□□□□ -0.9
HERPUD1-208ENST00000563911 C1orf53Q5VUE5 145 aa9.42□□□□□ -0.9
HERPUD1-208ENST00000563911 ZFP42Q96MM3 310 aa9.42□□□□□ -0.9
HERPUD1-208ENST00000563911 SETD1BQ9UPS6 1966 aaKnown RBP9.41□□□□□ -0.9
HERPUD1-208ENST00000563911 UBAP1LF5GYI3 381 aa9.41□□□□□ -0.9
HERPUD1-208ENST00000563911 TNFRSF10BO14763 440 aa9.41□□□□□ -0.9
HERPUD1-208ENST00000563911 RHOQP17081 205 aa9.41□□□□□ -0.9
HERPUD1-208ENST00000563911 NPR3P17342 541 aa9.41□□□□□ -0.9
HERPUD1-208ENST00000563911 ARHGAP4P98171 946 aa9.41□□□□□ -0.9
HERPUD1-208ENST00000563911 KLK14Q9P0G3 267 aa9.41□□□□□ -0.9
HERPUD1-208ENST00000563911 ZNF518AQ6AHZ1 1483 aa9.4□□□□□ -0.9
HERPUD1-208ENST00000563911 SOS2Q07890 1332 aaPredicted RBP9.4□□□□□ -0.9
HERPUD1-208ENST00000563911 TATP17735 454 aaPredicted RBP9.4□□□□□ -0.9
HERPUD1-208ENST00000563911 MAPK1P28482 360 aa9.4□□□□□ -0.9
HERPUD1-208ENST00000563911 LAPTM4AQ15012 233 aa9.4□□□□□ -0.9
HERPUD1-208ENST00000563911 NOM1Q5C9Z4 860 aaKnown RBP9.4□□□□□ -0.9
HERPUD1-208ENST00000563911 ABTB2Q8N961 1025 aa9.4□□□□□ -0.9
HERPUD1-208ENST00000563911 RHPN1Q8TCX5 695 aa9.4□□□□□ -0.9
HERPUD1-208ENST00000563911 CAMSAP1Q5T5Y3 1602 aa9.4□□□□□ -0.9
HERPUD1-208ENST00000563911 REREQ9P2R6 1566 aa9.4□□□□□ -0.9
HERPUD1-208ENST00000563911 IQSEC2Q5JU85 1478 aa9.4□□□□□ -0.91
HERPUD1-208ENST00000563911 MLH3Q9UHC1 1453 aa9.4□□□□□ -0.91
HERPUD1-208ENST00000563911 HSPA1LP34931 641 aa9.39□□□□□ -0.91
HERPUD1-208ENST00000563911 WDR44Q5JSH3 913 aa9.39□□□□□ -0.91
HERPUD1-208ENST00000563911 ALKBH2Q6NS38 261 aa9.39□□□□□ -0.91
HERPUD1-208ENST00000563911 CRIPAKQ8N1N5 446 aa9.39□□□□□ -0.91
HERPUD1-208ENST00000563911 IFT43Q96FT9 208 aa9.39□□□□□ -0.91
HERPUD1-208ENST00000563911 TIMMDC1Q9NPL8 285 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms