RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 PRR5LQ6MZQ0 368 aa15.48■□□□□ 0.07
HDGFL3-204ENST00000563790 OTOP1Q7RTM1 612 aa15.48■□□□□ 0.07
HDGFL3-204ENST00000563790 SYMPKQ92797 1274 aaKnown RBP15.48■□□□□ 0.07
HDGFL3-204ENST00000563790 TRIM17Q9Y577 477 aa15.48■□□□□ 0.07
HDGFL3-204ENST00000563790 SNED1Q8TER0 1413 aa15.47■□□□□ 0.07
HDGFL3-204ENST00000563790 DPF3Q92784 378 aa15.47■□□□□ 0.07
HDGFL3-204ENST00000563790 CFHR5Q9BXR6 569 aa15.47■□□□□ 0.07
HDGFL3-204ENST00000563790 SCN7AQ01118 1682 aa15.47■□□□□ 0.07
HDGFL3-204ENST00000563790 MRC1P22897 1456 aa15.46■□□□□ 0.07
HDGFL3-204ENST00000563790 TMEM265A0A087WTH1 108 aa15.46■□□□□ 0.07
HDGFL3-204ENST00000563790 RASAL3Q86YV0 1011 aa15.46■□□□□ 0.07
HDGFL3-204ENST00000563790 ARIH1Q9Y4X5 557 aaPredicted RBP15.46■□□□□ 0.07
HDGFL3-204ENST00000563790 COL15A1P39059 1388 aa15.46■□□□□ 0.07
HDGFL3-204ENST00000563790 NCAPD2Q15021 1401 aa15.45■□□□□ 0.06
HDGFL3-204ENST00000563790 OLFM4Q6UX06 510 aa15.45■□□□□ 0.06
HDGFL3-204ENST00000563790 RPTORQ8N122 1335 aa15.44■□□□□ 0.06
HDGFL3-204ENST00000563790 PPEF1O14829 653 aaPredicted RBP15.44■□□□□ 0.06
HDGFL3-204ENST00000563790 PHKG2P15735 406 aa15.44■□□□□ 0.06
HDGFL3-204ENST00000563790 HIRAP54198 1017 aaPredicted RBP15.44■□□□□ 0.06
HDGFL3-204ENST00000563790 DLK2Q6UY11 383 aa15.44■□□□□ 0.06
HDGFL3-204ENST00000563790 USP48Q86UV5 1035 aa15.44■□□□□ 0.06
HDGFL3-204ENST00000563790 IFNL2Q8IZJ0 200 aa15.44■□□□□ 0.06
HDGFL3-204ENST00000563790 ZNF333Q96JL9 665 aa15.44■□□□□ 0.06
HDGFL3-204ENST00000563790 PSMD1Q99460 953 aa15.44■□□□□ 0.06
HDGFL3-204ENST00000563790 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.44■□□□□ 0.06
HDGFL3-204ENST00000563790 PTPN22Q9Y2R2 807 aa15.44■□□□□ 0.06
HDGFL3-204ENST00000563790 CDH23Q9H251 3354 aa15.44■□□□□ 0.06
HDGFL3-204ENST00000563790 A0A1W2PP64 1363 aa15.44■□□□□ 0.06
HDGFL3-204ENST00000563790 ZNF646O15015 1829 aaPredicted RBP15.43■□□□□ 0.06
HDGFL3-204ENST00000563790 ERVV-2B6SEH9 535 aa15.43■□□□□ 0.06
HDGFL3-204ENST00000563790 TNFRSF10AO00220 468 aa15.43■□□□□ 0.06
HDGFL3-204ENST00000563790 FBLN1P23142 703 aa15.43■□□□□ 0.06
HDGFL3-204ENST00000563790 PTCD1O75127 700 aaKnown RBP15.42■□□□□ 0.06
HDGFL3-204ENST00000563790 ZBTB7BO15156 539 aaPredicted RBP15.41■□□□□ 0.06
HDGFL3-204ENST00000563790 TM4SF4P48230 202 aa15.41■□□□□ 0.06
HDGFL3-204ENST00000563790 R3HDMLQ9H3Y0 253 aa15.41■□□□□ 0.06
HDGFL3-204ENST00000563790 NR2E3Q9Y5X4 410 aa15.41■□□□□ 0.06
HDGFL3-204ENST00000563790 ALPK3Q96L96 1907 aa15.41■□□□□ 0.06
HDGFL3-204ENST00000563790 ZDBF2Q9HCK1 2354 aa15.4■□□□□ 0.06
HDGFL3-204ENST00000563790 CDHR2Q9BYE9 1310 aa15.4■□□□□ 0.06
HDGFL3-204ENST00000563790 TONSLQ96HA7 1378 aa15.39■□□□□ 0.05
HDGFL3-204ENST00000563790 LAMB1P07942 1786 aa15.39■□□□□ 0.05
HDGFL3-204ENST00000563790 CACNA1BQ00975 2339 aa15.38■□□□□ 0.05
HDGFL3-204ENST00000563790 KCNA4P22459 653 aa15.38■□□□□ 0.05
HDGFL3-204ENST00000563790 BAHCC1Q9P281 2608 aa15.38■□□□□ 0.05
HDGFL3-204ENST00000563790 ZNF609O15014 1411 aa15.37■□□□□ 0.05
HDGFL3-204ENST00000563790 NPR1P16066 1061 aa15.37■□□□□ 0.05
HDGFL3-204ENST00000563790 SLC4A8Q2Y0W8 1093 aa15.37■□□□□ 0.05
HDGFL3-204ENST00000563790 LRIT3Q3SXY7 679 aa15.37■□□□□ 0.05
HDGFL3-204ENST00000563790 TBC1D9BQ66K14 1250 aa15.37■□□□□ 0.05
HDGFL3-204ENST00000563790 TRPM4Q8TD43 1214 aa15.37■□□□□ 0.05
HDGFL3-204ENST00000563790 LOC105371045A0A1W2PR82 267 aa15.36■□□□□ 0.05
HDGFL3-204ENST00000563790 WTIPA6NIX2 430 aaPredicted RBP15.36■□□□□ 0.05
HDGFL3-204ENST00000563790 KRT26Q7Z3Y9 468 aa15.36■□□□□ 0.05
HDGFL3-204ENST00000563790 LARGE2Q8N3Y3 721 aa15.36■□□□□ 0.05
HDGFL3-204ENST00000563790 CNBD1Q8NA66 436 aa15.36■□□□□ 0.05
HDGFL3-204ENST00000563790 SPTBN4Q9H254 2564 aa15.35■□□□□ 0.05
HDGFL3-204ENST00000563790 GMPSP49915 693 aaPredicted RBP15.35■□□□□ 0.05
HDGFL3-204ENST00000563790 HTATIP2Q9BUP3 242 aa15.35■□□□□ 0.05
HDGFL3-204ENST00000563790 ST5P78524 1137 aa15.34■□□□□ 0.05
HDGFL3-204ENST00000563790 RRS1Q15050 365 aaKnown RBP15.34■□□□□ 0.05
HDGFL3-204ENST00000563790 HDGFL2Q7Z4V5 671 aaPredicted RBP15.34■□□□□ 0.05
HDGFL3-204ENST00000563790 COG3Q96JB2 828 aa15.34■□□□□ 0.05
HDGFL3-204ENST00000563790 GUCD1Q96NT3 240 aa15.34■□□□□ 0.05
HDGFL3-204ENST00000563790 STAP2Q9UGK3 403 aa15.34■□□□□ 0.05
HDGFL3-204ENST00000563790 NPC1L1Q9UHC9 1359 aa15.34■□□□□ 0.05
HDGFL3-204ENST00000563790 HSP90AB2PQ58FF8 381 aa15.33■□□□□ 0.04
HDGFL3-204ENST00000563790 TAF1P21675 1872 aa15.33■□□□□ 0.04
HDGFL3-204ENST00000563790 CFAP54Q96N23 3096 aa15.32■□□□□ 0.04
HDGFL3-204ENST00000563790 BMP8BP34820 402 aa15.32■□□□□ 0.04
HDGFL3-204ENST00000563790 NBPF11Q86T75 865 aa15.32■□□□□ 0.04
HDGFL3-204ENST00000563790 DNAJC10Q8IXB1 793 aa15.32■□□□□ 0.04
HDGFL3-204ENST00000563790 CYP19A1P11511 503 aaPredicted RBP15.31■□□□□ 0.04
HDGFL3-204ENST00000563790 UBE2Q1Q7Z7E8 422 aa15.31■□□□□ 0.04
HDGFL3-204ENST00000563790 NIM1KQ8IY84 436 aa15.31■□□□□ 0.04
HDGFL3-204ENST00000563790 ERO1AQ96HE7 468 aa15.31■□□□□ 0.04
HDGFL3-204ENST00000563790 ZBTB1Q9Y2K1 713 aa15.31■□□□□ 0.04
HDGFL3-204ENST00000563790 KLRG2A4D1S0 409 aaPredicted RBP15.3■□□□□ 0.04
HDGFL3-204ENST00000563790 ADM5C9JUS6 153 aa15.3■□□□□ 0.04
HDGFL3-204ENST00000563790 CXCL9Q07325 125 aa15.3■□□□□ 0.04
HDGFL3-204ENST00000563790 FLT4P35916 1363 aa15.29■□□□□ 0.04
HDGFL3-204ENST00000563790 NPHP1O15259 732 aa15.29■□□□□ 0.04
HDGFL3-204ENST00000563790 SREBF2Q12772 1141 aa15.29■□□□□ 0.04
HDGFL3-204ENST00000563790 SLC9C1Q4G0N8 1177 aa15.29■□□□□ 0.04
HDGFL3-204ENST00000563790 CNKSR2Q8WXI2 1034 aa15.29■□□□□ 0.04
HDGFL3-204ENST00000563790 SHISA4Q96DD7 197 aa15.29■□□□□ 0.04
HDGFL3-204ENST00000563790 KIF24Q5T7B8 1368 aa15.28■□□□□ 0.04
HDGFL3-204ENST00000563790 BCAMP50895 628 aa15.28■□□□□ 0.04
HDGFL3-204ENST00000563790 CABP4P57796 275 aa15.28■□□□□ 0.04
HDGFL3-204ENST00000563790 FKBP1BP68106 108 aa15.28■□□□□ 0.04
HDGFL3-204ENST00000563790 CC2D2BQ6DHV5 1058 aa15.28■□□□□ 0.04
HDGFL3-204ENST00000563790 ALYREFQ86V81 257 aaKnown RBP15.28■□□□□ 0.04
HDGFL3-204ENST00000563790 P2RX7Q99572 595 aaKnown RBP15.28■□□□□ 0.04
HDGFL3-204ENST00000563790 EFCC1Q9HA90 598 aa15.28■□□□□ 0.04
HDGFL3-204ENST00000563790 CHD8Q9HCK8 2581 aa15.28■□□□□ 0.04
HDGFL3-204ENST00000563790 WASHC2AQ641Q2 1341 aa15.27■□□□□ 0.04
HDGFL3-204ENST00000563790 ALDH1A1P00352 501 aa15.27■□□□□ 0.04
HDGFL3-204ENST00000563790 HSP90AB1P08238 724 aaKnown RBP15.27■□□□□ 0.04
HDGFL3-204ENST00000563790 FAM109BQ6ICB4 259 aaPredicted RBP15.27■□□□□ 0.04
HDGFL3-204ENST00000563790 SAMD7Q7Z3H4 446 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms