RNA–Protein interactions for RNA: ENST00000563275.1

PKM-208, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 699 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-208ENST00000563275 ZNF219Q9P2Y4 722 aaPredicted RBP16.35■□□□□ 0.21
PKM-208ENST00000563275 DBF4Q9UBU7 674 aaPredicted RBP16.35■□□□□ 0.21
PKM-208ENST00000563275 ANKRD36CQ5JPF3 1778 aa16.34■□□□□ 0.21
PKM-208ENST00000563275 HSPA6P17066 643 aa16.34■□□□□ 0.21
PKM-208ENST00000563275 CCDC93Q567U6 631 aa16.34■□□□□ 0.21
PKM-208ENST00000563275 HSP90AB3PQ58FF7 597 aa16.34■□□□□ 0.21
PKM-208ENST00000563275 PPP1R42Q7Z4L9 355 aa16.34■□□□□ 0.21
PKM-208ENST00000563275 NLRP10Q86W26 655 aa16.34■□□□□ 0.21
PKM-208ENST00000563275 DICER1Q9UPY3 1922 aaKnown RBP16.34■□□□□ 0.21
PKM-208ENST00000563275 CACNA1SQ13698 1873 aa16.33■□□□□ 0.21
PKM-208ENST00000563275 ALDH1B1P30837 517 aa16.33■□□□□ 0.2
PKM-208ENST00000563275 OLFM4Q6UX06 510 aa16.33■□□□□ 0.2
PKM-208ENST00000563275 PLBD2Q8NHP8 589 aa16.33■□□□□ 0.2
PKM-208ENST00000563275 RBM46Q8TBY0 533 aaKnown RBP16.33■□□□□ 0.2
PKM-208ENST00000563275 UTP14AQ9BVJ6 771 aaKnown RBP16.33■□□□□ 0.2
PKM-208ENST00000563275 FKBP4Q02790 459 aaKnown RBP eCLIP16.32■□□□□ 0.2
PKM-208ENST00000563275 AIMP1Q12904 312 aaKnown RBP16.32■□□□□ 0.2
PKM-208ENST00000563275 CCDC88AQ3V6T2 1871 aa16.32■□□□□ 0.2
PKM-208ENST00000563275 CRAMP1Q96RY5 1269 aa16.32■□□□□ 0.2
PKM-208ENST00000563275 HYPKQ9NX55 129 aa16.32■□□□□ 0.2
PKM-208ENST00000563275 WDR90Q96KV7 1748 aa16.31■□□□□ 0.2
PKM-208ENST00000563275 POTECB2RU33 542 aa16.31■□□□□ 0.2
PKM-208ENST00000563275 ANP32CO43423 234 aa16.31■□□□□ 0.2
PKM-208ENST00000563275 WWC1Q8IX03 1113 aa16.31■□□□□ 0.2
PKM-208ENST00000563275 RTKN2Q8IZC4 609 aa16.31■□□□□ 0.2
PKM-208ENST00000563275 C8orf58Q8NAV2 365 aa16.31■□□□□ 0.2
PKM-208ENST00000563275 ISCA1Q9BUE6 129 aa16.31■□□□□ 0.2
PKM-208ENST00000563275 RRAGCQ9HB90 399 aa16.31■□□□□ 0.2
PKM-208ENST00000563275 MRS2Q9HD23 443 aa16.31■□□□□ 0.2
PKM-208ENST00000563275 CC2D2BQ6DHV5 1058 aa16.3■□□□□ 0.2
PKM-208ENST00000563275 ANKRD13DQ6ZTN6 518 aa16.3■□□□□ 0.2
PKM-208ENST00000563275 PSMD1Q99460 953 aa16.3■□□□□ 0.2
PKM-208ENST00000563275 IL16Q14005 1332 aa16.29■□□□□ 0.2
PKM-208ENST00000563275 TRIM28Q13263 835 aaKnown RBP16.29■□□□□ 0.2
PKM-208ENST00000563275 RPGRQ92834 1020 aaKnown RBP16.29■□□□□ 0.2
PKM-208ENST00000563275 SH3TC1Q8TE82 1336 aa16.28■□□□□ 0.2
PKM-208ENST00000563275 VEGFAP15692 232 aaPredicted RBP16.28■□□□□ 0.2
PKM-208ENST00000563275 FSTL1Q12841 308 aa16.28■□□□□ 0.2
PKM-208ENST00000563275 SLC51AQ86UW1 340 aa16.28■□□□□ 0.2
PKM-208ENST00000563275 SYNE4Q8N205 404 aa16.28■□□□□ 0.2
PKM-208ENST00000563275 TSPYL6Q8N831 410 aa16.28■□□□□ 0.2
PKM-208ENST00000563275 NLRP3Q96P20 1036 aa16.28■□□□□ 0.2
PKM-208ENST00000563275 GRIPAP1Q4V328 841 aa16.27■□□□□ 0.2
PKM-208ENST00000563275 RBM17Q96I25 401 aaKnown RBP16.27■□□□□ 0.2
PKM-208ENST00000563275 ZNF277Q9NRM2 450 aaPredicted RBP16.27■□□□□ 0.2
PKM-208ENST00000563275 LAMB2P55268 1798 aa16.26■□□□□ 0.19
PKM-208ENST00000563275 ABCC4O15439 1325 aa16.26■□□□□ 0.19
PKM-208ENST00000563275 ELL2O00472 640 aaPredicted RBP16.26■□□□□ 0.19
PKM-208ENST00000563275 DPY19L2Q6NUT2 758 aa16.26■□□□□ 0.19
PKM-208ENST00000563275 TSR2Q969E8 191 aaKnown RBP16.26■□□□□ 0.19
PKM-208ENST00000563275 L3MBTL3Q96JM7 780 aaPredicted RBP16.26■□□□□ 0.19
PKM-208ENST00000563275 TRMT112Q9UI30 125 aaKnown RBP16.26■□□□□ 0.19
PKM-208ENST00000563275 COL4A5P29400 1685 aa16.26■□□□□ 0.19
PKM-208ENST00000563275 FZD9O00144 591 aa16.25■□□□□ 0.19
PKM-208ENST00000563275 PPEF1O14829 653 aaPredicted RBP16.25■□□□□ 0.19
PKM-208ENST00000563275 HCLS1P14317 486 aaPredicted RBP16.25■□□□□ 0.19
PKM-208ENST00000563275 IARSP41252 1262 aaKnown RBP16.25■□□□□ 0.19
PKM-208ENST00000563275 PHAXQ9H814 394 aaKnown RBP16.25■□□□□ 0.19
PKM-208ENST00000563275 ZNF541Q9H0D2 1346 aa16.24■□□□□ 0.19
PKM-208ENST00000563275 ATP5J2-PTCD1G3V325 749 aa16.24■□□□□ 0.19
PKM-208ENST00000563275 DDNO94850 711 aaPredicted RBP16.24■□□□□ 0.19
PKM-208ENST00000563275 APLP1P51693 650 aa16.24■□□□□ 0.19
PKM-208ENST00000563275 CCDC30Q5VVM6 783 aa16.24■□□□□ 0.19
PKM-208ENST00000563275 C16orf71Q8IYS4 520 aaPredicted RBP16.24■□□□□ 0.19
PKM-208ENST00000563275 CHMP4AQ9BY43 222 aa16.24■□□□□ 0.19
PKM-208ENST00000563275 ATP6V0A2Q9Y487 856 aa16.24■□□□□ 0.19
PKM-208ENST00000563275 DDX60Q8IY21 1712 aaKnown RBP16.24■□□□□ 0.19
PKM-208ENST00000563275 SF3B3Q15393 1217 aaKnown RBP16.23■□□□□ 0.19
PKM-208ENST00000563275 SMC1BQ8NDV3 1235 aa16.23■□□□□ 0.19
PKM-208ENST00000563275 BBOX1O75936 387 aa16.22■□□□□ 0.19
PKM-208ENST00000563275 GOLGA2Q08379 1002 aa16.22■□□□□ 0.19
PKM-208ENST00000563275 WDR63Q8IWG1 891 aa16.22■□□□□ 0.19
PKM-208ENST00000563275 DNAJC5GQ8N7S2 189 aa16.22■□□□□ 0.19
PKM-208ENST00000563275 RTFDC1Q9BY42 306 aaPredicted RBP16.22■□□□□ 0.19
PKM-208ENST00000563275 FANCIQ9NVI1 1328 aa16.21■□□□□ 0.19
PKM-208ENST00000563275 GRAPQ13588 217 aa16.21■□□□□ 0.19
PKM-208ENST00000563275 RIC3Q7Z5B4 369 aa16.21■□□□□ 0.19
PKM-208ENST00000563275 GRAPLQ8TC17 118 aaPredicted RBP16.21■□□□□ 0.19
PKM-208ENST00000563275 FAM89AQ96GI7 184 aa16.21■□□□□ 0.19
PKM-208ENST00000563275 LRRC37AA6NMS7 1700 aa16.2■□□□□ 0.18
PKM-208ENST00000563275 TWISTNBQ3B726 338 aaPredicted RBP16.2■□□□□ 0.18
PKM-208ENST00000563275 SP8Q8IXZ3 490 aa16.2■□□□□ 0.18
PKM-208ENST00000563275 ZBTB38Q8NAP3 1195 aaPredicted RBP16.2■□□□□ 0.18
PKM-208ENST00000563275 METTL22Q9BUU2 404 aaPredicted RBP16.2■□□□□ 0.18
PKM-208ENST00000563275 VPS33BQ9H267 617 aa16.2■□□□□ 0.18
PKM-208ENST00000563275 COL4A1P02462 1669 aa16.2■□□□□ 0.18
PKM-208ENST00000563275 DUOX1Q9NRD9 1551 aa16.19■□□□□ 0.18
PKM-208ENST00000563275 DDX46Q7L014 1031 aaKnown RBP16.19■□□□□ 0.18
PKM-208ENST00000563275 CCDC191Q8NCU4 936 aa16.19■□□□□ 0.18
PKM-208ENST00000563275 ZNF428Q96B54 188 aa16.19■□□□□ 0.18
PKM-208ENST00000563275 SCN4AP35499 1836 aa16.19■□□□□ 0.18
PKM-208ENST00000563275 IQCA1LA6NCM1 817 aa16.18■□□□□ 0.18
PKM-208ENST00000563275 IRS4O14654 1257 aaPredicted RBP16.18■□□□□ 0.18
PKM-208ENST00000563275 DDX58O95786 925 aaKnown RBP16.18■□□□□ 0.18
PKM-208ENST00000563275 KSR2Q6VAB6 950 aa16.18■□□□□ 0.18
PKM-208ENST00000563275 TMC4Q7Z404 712 aa16.18■□□□□ 0.18
PKM-208ENST00000563275 GPC2Q8N158 579 aa16.18■□□□□ 0.18
PKM-208ENST00000563275 MYD88Q99836 296 aa16.18■□□□□ 0.18
PKM-208ENST00000563275 TAF1DQ9H5J8 278 aaPredicted RBP16.18■□□□□ 0.18
PKM-208ENST00000563275 SPINK5Q9NQ38 1064 aaPredicted RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms