RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 WASHC4Q2M389 1173 aa5.82□□□□□ -1.48
SMG1-207ENST00000563235 ACRBPQ8NEB7 543 aa5.82□□□□□ -1.48
SMG1-207ENST00000563235 NELL2Q99435 816 aa5.82□□□□□ -1.48
SMG1-207ENST00000563235 PRKAB1Q9Y478 270 aa5.82□□□□□ -1.48
SMG1-207ENST00000563235 MRVI1Q9Y6F6 885 aa5.82□□□□□ -1.48
SMG1-207ENST00000563235 NDUFB9Q9Y6M9 179 aa5.82□□□□□ -1.48
SMG1-207ENST00000563235 PIK3CDO00329 1044 aa5.81□□□□□ -1.48
SMG1-207ENST00000563235 HMMRO75330 724 aa5.81□□□□□ -1.48
SMG1-207ENST00000563235 ZNF76P36508 570 aa5.81□□□□□ -1.48
SMG1-207ENST00000563235 PSMC1P62191 440 aaKnown RBP5.81□□□□□ -1.48
SMG1-207ENST00000563235 DALRD3Q5D0E6 543 aaKnown RBP5.81□□□□□ -1.48
SMG1-207ENST00000563235 DNAJC21Q5F1R6 531 aaKnown RBP5.81□□□□□ -1.48
SMG1-207ENST00000563235 TEX19Q8NA77 164 aa5.81□□□□□ -1.48
SMG1-207ENST00000563235 RNF217Q8TC41 542 aa5.81□□□□□ -1.48
SMG1-207ENST00000563235 L3MBTL3Q96JM7 780 aaPredicted RBP5.81□□□□□ -1.48
SMG1-207ENST00000563235 TMEM87BQ96K49 555 aa5.81□□□□□ -1.48
SMG1-207ENST00000563235 TMEM63CQ9P1W3 806 aa5.81□□□□□ -1.48
SMG1-207ENST00000563235 ADGRL1O94910 1474 aa5.81□□□□□ -1.48
SMG1-207ENST00000563235 PRDM2Q13029 1718 aa5.81□□□□□ -1.48
SMG1-207ENST00000563235 ATP9BO43861 1147 aa5.81□□□□□ -1.48
SMG1-207ENST00000563235 PRMT3O60678 531 aa5.81□□□□□ -1.48
SMG1-207ENST00000563235 MYL1P05976 194 aa5.81□□□□□ -1.48
SMG1-207ENST00000563235 PPP2R5AQ15172 486 aa5.81□□□□□ -1.48
SMG1-207ENST00000563235 ZCCHC8Q6NZY4 707 aaKnown RBP5.81□□□□□ -1.48
SMG1-207ENST00000563235 C16orf54Q6UWD8 224 aa5.81□□□□□ -1.48
SMG1-207ENST00000563235 SLF2Q8IX21 1173 aa5.81□□□□□ -1.48
SMG1-207ENST00000563235 EFCAB3Q8N7B9 438 aa5.81□□□□□ -1.48
SMG1-207ENST00000563235 TMX1Q9H3N1 280 aa5.81□□□□□ -1.48
SMG1-207ENST00000563235 TRIM64CA6NLI5 447 aa5.81□□□□□ -1.48
SMG1-207ENST00000563235 PPFIA3O75145 1194 aa5.81□□□□□ -1.48
SMG1-207ENST00000563235 ALDH1L1O75891 902 aa5.81□□□□□ -1.48
SMG1-207ENST00000563235 MYL3P08590 195 aa5.81□□□□□ -1.48
SMG1-207ENST00000563235 ARHGAP4P98171 946 aa5.81□□□□□ -1.48
SMG1-207ENST00000563235 KSR2Q6VAB6 950 aa5.81□□□□□ -1.48
SMG1-207ENST00000563235 NDUFAF2Q8N183 169 aa5.81□□□□□ -1.48
SMG1-207ENST00000563235 PDGFDQ9GZP0 370 aaPredicted RBP5.81□□□□□ -1.48
SMG1-207ENST00000563235 LUZP4Q9P127 313 aa5.81□□□□□ -1.48
SMG1-207ENST00000563235 RABGAP1Q9Y3P9 1069 aa5.81□□□□□ -1.48
SMG1-207ENST00000563235 DAAM1Q9Y4D1 1078 aa5.81□□□□□ -1.48
SMG1-207ENST00000563235 ZNF608Q9ULD9 1512 aaPredicted RBP5.81□□□□□ -1.48
SMG1-207ENST00000563235 SHTN1A0MZ66 631 aa5.8□□□□□ -1.48
SMG1-207ENST00000563235 MAP3K13O43283 966 aa5.8□□□□□ -1.48
SMG1-207ENST00000563235 PIP5K1CO60331 668 aa5.8□□□□□ -1.48
SMG1-207ENST00000563235 PEX19P40855 299 aa5.8□□□□□ -1.48
SMG1-207ENST00000563235 TSPAN7P41732 249 aa5.8□□□□□ -1.48
SMG1-207ENST00000563235 EXOSC10Q01780 885 aaKnown RBP5.8□□□□□ -1.48
SMG1-207ENST00000563235 SOGA3Q5TF21 947 aa5.8□□□□□ -1.48
SMG1-207ENST00000563235 PARP2Q9UGN5 583 aa5.8□□□□□ -1.48
SMG1-207ENST00000563235 DCTN4Q9UJW0 460 aa5.8□□□□□ -1.48
SMG1-207ENST00000563235 TMCC3Q9ULS5 477 aa5.8□□□□□ -1.48
SMG1-207ENST00000563235 KCNA2P16389 499 aa5.8□□□□□ -1.48
SMG1-207ENST00000563235 CTHP32929 405 aa5.8□□□□□ -1.48
SMG1-207ENST00000563235 MASP1P48740 699 aa5.8□□□□□ -1.48
SMG1-207ENST00000563235 TTF1Q15361 905 aaPredicted RBP5.8□□□□□ -1.48
SMG1-207ENST00000563235 FAM83BQ5T0W9 1011 aa5.8□□□□□ -1.48
SMG1-207ENST00000563235 LMNTD2Q8IXW0 634 aa5.8□□□□□ -1.48
SMG1-207ENST00000563235 GOLGA1Q92805 767 aa5.8□□□□□ -1.48
SMG1-207ENST00000563235 RELTQ969Z4 430 aa5.8□□□□□ -1.48
SMG1-207ENST00000563235 RAI14Q9P0K7 980 aa5.8□□□□□ -1.48
SMG1-207ENST00000563235 CNTN3Q9P232 1028 aa5.8□□□□□ -1.48
SMG1-207ENST00000563235 PCDHB8Q9UN66 801 aa5.8□□□□□ -1.48
SMG1-207ENST00000563235 PCDHB13Q9Y5F0 798 aa5.8□□□□□ -1.48
SMG1-207ENST00000563235 GAPVD1Q14C86 1478 aa5.8□□□□□ -1.48
SMG1-207ENST00000563235 A0A1W2PRQ8 180 aa5.79□□□□□ -1.48
SMG1-207ENST00000563235 FAM221BA6H8Z2 402 aa5.79□□□□□ -1.48
SMG1-207ENST00000563235 ERICH4A6NGS2 130 aa5.79□□□□□ -1.48
SMG1-207ENST00000563235 PES1O00541 588 aaKnown RBP5.79□□□□□ -1.48
SMG1-207ENST00000563235 CDC45O75419 566 aa5.79□□□□□ -1.48
SMG1-207ENST00000563235 POU3F3P20264 500 aaPredicted RBP5.79□□□□□ -1.48
SMG1-207ENST00000563235 ESCO1Q5FWF5 840 aa5.79□□□□□ -1.48
SMG1-207ENST00000563235 PPP1R15BQ5SWA1 713 aa5.79□□□□□ -1.48
SMG1-207ENST00000563235 MSL1Q68DK7 614 aa5.79□□□□□ -1.48
SMG1-207ENST00000563235 HDGFL2Q7Z4V5 671 aaPredicted RBP5.79□□□□□ -1.48
SMG1-207ENST00000563235 IFNL3Q8IZI9 196 aa5.79□□□□□ -1.48
SMG1-207ENST00000563235 CLP1Q92989 425 aaKnown RBP5.79□□□□□ -1.48
SMG1-207ENST00000563235 CCDC34Q96HJ3 373 aa5.79□□□□□ -1.48
SMG1-207ENST00000563235 SRPK1Q96SB4 655 aaKnown RBP5.79□□□□□ -1.48
SMG1-207ENST00000563235 EMILIN1Q9Y6C2 1016 aa5.79□□□□□ -1.48
SMG1-207ENST00000563235 A6NCN8 305 aa5.79□□□□□ -1.48
SMG1-207ENST00000563235 SPECC1Q5M775 1068 aa5.79□□□□□ -1.48
SMG1-207ENST00000563235 SLC4A10Q6U841 1118 aa5.79□□□□□ -1.48
SMG1-207ENST00000563235 GLYCTKQ8IVS8 523 aa5.79□□□□□ -1.48
SMG1-207ENST00000563235 OGFOD1Q8N543 542 aa5.79□□□□□ -1.48
SMG1-207ENST00000563235 ATRIPQ8WXE1 791 aa5.79□□□□□ -1.48
SMG1-207ENST00000563235 TBC1D20Q96BZ9 403 aa5.79□□□□□ -1.48
SMG1-207ENST00000563235 SERINC2Q96SA4 455 aa5.79□□□□□ -1.48
SMG1-207ENST00000563235 GPHNQ9NQX3 736 aaPredicted RBP5.79□□□□□ -1.48
SMG1-207ENST00000563235 ACAD8Q9UKU7 415 aa5.79□□□□□ -1.48
SMG1-207ENST00000563235 FANCIQ9NVI1 1328 aa5.79□□□□□ -1.48
SMG1-207ENST00000563235 POTEFA5A3E0 1075 aa5.78□□□□□ -1.48
SMG1-207ENST00000563235 RPN1P04843 607 aaKnown RBP5.78□□□□□ -1.48
SMG1-207ENST00000563235 ATF3P18847 181 aa5.78□□□□□ -1.48
SMG1-207ENST00000563235 TAF11Q15544 211 aa5.78□□□□□ -1.48
SMG1-207ENST00000563235 MFSD4BQ5TF39 518 aa5.78□□□□□ -1.48
SMG1-207ENST00000563235 SH3TC2Q8TF17 1288 aa5.78□□□□□ -1.48
SMG1-207ENST00000563235 JARID2Q92833 1246 aaPredicted RBP5.78□□□□□ -1.48
SMG1-207ENST00000563235 CDHR1Q96JP9 859 aa5.78□□□□□ -1.48
SMG1-207ENST00000563235 SETDB2Q96T68 719 aa5.78□□□□□ -1.48
SMG1-207ENST00000563235 METTL5Q9NRN9 209 aaKnown RBP5.78□□□□□ -1.48
SMG1-207ENST00000563235 ICMTO60725 284 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms