RNA–Protein interactions for RNA: ENST00000563218.5

SPG7-207, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-207ENST00000563218 C3orf67Q6ZVT6 689 aa17.62■□□□□ 0.41
SPG7-207ENST00000563218 ZBTB3Q9H5J0 574 aa17.62■□□□□ 0.41
SPG7-207ENST00000563218 ITGBL1O95965 494 aaPredicted RBP17.61■□□□□ 0.41
SPG7-207ENST00000563218 GTF2E1P29083 439 aaPredicted RBP17.61■□□□□ 0.41
SPG7-207ENST00000563218 CRY2Q49AN0 593 aa17.61■□□□□ 0.41
SPG7-207ENST00000563218 RTKN2Q8IZC4 609 aa17.61■□□□□ 0.41
SPG7-207ENST00000563218 FZD9O00144 591 aa17.6■□□□□ 0.41
SPG7-207ENST00000563218 ALDH1B1P30837 517 aa17.6■□□□□ 0.41
SPG7-207ENST00000563218 EPHX2P34913 555 aa17.6■□□□□ 0.41
SPG7-207ENST00000563218 NFE2L2Q16236 605 aa17.6■□□□□ 0.41
SPG7-207ENST00000563218 SUSD4Q5VX71 490 aa17.6■□□□□ 0.41
SPG7-207ENST00000563218 HACL1Q9UJ83 578 aa17.6■□□□□ 0.41
SPG7-207ENST00000563218 THSD7BQ9C0I4 1608 aa17.6■□□□□ 0.41
SPG7-207ENST00000563218 IBTKQ9P2D0 1353 aaPredicted RBP17.59■□□□□ 0.41
SPG7-207ENST00000563218 ERVV-1B6SEH8 477 aa17.59■□□□□ 0.41
SPG7-207ENST00000563218 FOXN1O15353 648 aa17.59■□□□□ 0.41
SPG7-207ENST00000563218 TCERG1O14776 1098 aaKnown RBP17.58■□□□□ 0.4
SPG7-207ENST00000563218 NTSR2O95665 410 aa17.58■□□□□ 0.4
SPG7-207ENST00000563218 MAP1SQ66K74 1059 aaPredicted RBP17.58■□□□□ 0.4
SPG7-207ENST00000563218 KIF6Q6ZMV9 814 aa17.58■□□□□ 0.4
SPG7-207ENST00000563218 NYXQ9GZU5 481 aa17.58■□□□□ 0.4
SPG7-207ENST00000563218 CLEC11AQ9Y240 323 aa17.58■□□□□ 0.4
SPG7-207ENST00000563218 ANXA1P04083 346 aa17.57■□□□□ 0.4
SPG7-207ENST00000563218 VEGFBP49765 207 aa17.57■□□□□ 0.4
SPG7-207ENST00000563218 RALBP1Q15311 655 aa17.57■□□□□ 0.4
SPG7-207ENST00000563218 LRP10Q7Z4F1 713 aa17.57■□□□□ 0.4
SPG7-207ENST00000563218 ZNF34Q8IZ26 560 aa17.57■□□□□ 0.4
SPG7-207ENST00000563218 PNISRQ8TF01 805 aaKnown RBP17.57■□□□□ 0.4
SPG7-207ENST00000563218 PSMD1Q99460 953 aa17.57■□□□□ 0.4
SPG7-207ENST00000563218 LRRC37AA6NMS7 1700 aa17.57■□□□□ 0.4
SPG7-207ENST00000563218 COL4A1P02462 1669 aa17.56■□□□□ 0.4
SPG7-207ENST00000563218 TMEM88BA6NKF7 163 aa17.56■□□□□ 0.4
SPG7-207ENST00000563218 FMR1Q06787 632 aaKnown RBP eCLIP17.56■□□□□ 0.4
SPG7-207ENST00000563218 PROSER3Q2NL68 480 aa17.56■□□□□ 0.4
SPG7-207ENST00000563218 RPGRQ92834 1020 aaKnown RBP17.56■□□□□ 0.4
SPG7-207ENST00000563218 GJA3Q9Y6H8 435 aa17.56■□□□□ 0.4
SPG7-207ENST00000563218 NEFMP07197 916 aa17.55■□□□□ 0.4
SPG7-207ENST00000563218 HOXA10P31260 410 aaPredicted RBP17.55■□□□□ 0.4
SPG7-207ENST00000563218 GPC2Q8N158 579 aa17.55■□□□□ 0.4
SPG7-207ENST00000563218 MAPK8IP3Q9UPT6 1336 aa17.54■□□□□ 0.4
SPG7-207ENST00000563218 PPEF1O14829 653 aaPredicted RBP17.54■□□□□ 0.4
SPG7-207ENST00000563218 PDIA6Q15084 440 aa17.54■□□□□ 0.4
SPG7-207ENST00000563218 GIGYF2Q6Y7W6 1299 aaKnown RBP17.54■□□□□ 0.4
SPG7-207ENST00000563218 CNTROBQ8N137 903 aa17.54■□□□□ 0.4
SPG7-207ENST00000563218 DUOX1Q9NRD9 1551 aa17.53■□□□□ 0.4
SPG7-207ENST00000563218 POLR2AP24928 1970 aaKnown RBP17.53■□□□□ 0.4
SPG7-207ENST00000563218 EIF2S2P20042 333 aaKnown RBP17.53■□□□□ 0.4
SPG7-207ENST00000563218 SCNN1DP51172 638 aa17.53■□□□□ 0.4
SPG7-207ENST00000563218 JDP2Q8WYK2 163 aa17.53■□□□□ 0.4
SPG7-207ENST00000563218 TSPYL4Q9UJ04 414 aa17.53■□□□□ 0.4
SPG7-207ENST00000563218 EPS15P42566 896 aa17.52■□□□□ 0.4
SPG7-207ENST00000563218 EIF6P56537 245 aaKnown RBP17.52■□□□□ 0.4
SPG7-207ENST00000563218 LARGE2Q8N3Y3 721 aa17.52■□□□□ 0.4
SPG7-207ENST00000563218 NECTIN2Q92692 538 aa17.52■□□□□ 0.4
SPG7-207ENST00000563218 ABCC4O15439 1325 aa17.51■□□□□ 0.39
SPG7-207ENST00000563218 MYBBP1AQ9BQG0 1328 aaKnown RBP17.51■□□□□ 0.39
SPG7-207ENST00000563218 ZNF428Q96B54 188 aa17.51■□□□□ 0.39
SPG7-207ENST00000563218 RBM17Q96I25 401 aaKnown RBP17.51■□□□□ 0.39
SPG7-207ENST00000563218 CRAMP1Q96RY5 1269 aa17.51■□□□□ 0.39
SPG7-207ENST00000563218 ERBB4Q15303 1308 aa17.5■□□□□ 0.39
SPG7-207ENST00000563218 RASSF10A6NK89 507 aa17.5■□□□□ 0.39
SPG7-207ENST00000563218 AOC3Q16853 763 aa17.5■□□□□ 0.39
SPG7-207ENST00000563218 KRT24Q2M2I5 525 aa17.5■□□□□ 0.39
SPG7-207ENST00000563218 CC2D2BQ6DHV5 1058 aa17.5■□□□□ 0.39
SPG7-207ENST00000563218 PNMA8AQ86V59 439 aaPredicted RBP17.5■□□□□ 0.39
SPG7-207ENST00000563218 RIPK4P57078 832 aa17.49■□□□□ 0.39
SPG7-207ENST00000563218 TRAF5O00463 557 aa17.48■□□□□ 0.39
SPG7-207ENST00000563218 PPIP5K2O43314 1243 aa17.48■□□□□ 0.39
SPG7-207ENST00000563218 PPP1R42Q7Z4L9 355 aa17.48■□□□□ 0.39
SPG7-207ENST00000563218 MRS2Q9HD23 443 aa17.48■□□□□ 0.39
SPG7-207ENST00000563218 DDX21Q9NR30 783 aaKnown RBP eCLIP17.48■□□□□ 0.39
SPG7-207ENST00000563218 WBP1LQ9NX94 342 aa17.48■□□□□ 0.39
SPG7-207ENST00000563218 PCDH10Q9P2E7 1040 aa17.48■□□□□ 0.39
SPG7-207ENST00000563218 HCLS1P14317 486 aaPredicted RBP17.47■□□□□ 0.39
SPG7-207ENST00000563218 LMOD1P29536 600 aaPredicted RBP17.47■□□□□ 0.39
SPG7-207ENST00000563218 LBX1P52954 281 aa17.47■□□□□ 0.39
SPG7-207ENST00000563218 AIMP1Q12904 312 aaKnown RBP17.47■□□□□ 0.39
SPG7-207ENST00000563218 DEFB115Q30KQ5 88 aa17.47■□□□□ 0.39
SPG7-207ENST00000563218 PARP10Q53GL7 1025 aa17.47■□□□□ 0.39
SPG7-207ENST00000563218 NIM1KQ8IY84 436 aa17.47■□□□□ 0.39
SPG7-207ENST00000563218 UTP14AQ9BVJ6 771 aaKnown RBP17.47■□□□□ 0.39
SPG7-207ENST00000563218 ABT1Q9ULW3 272 aaKnown RBP17.47■□□□□ 0.39
SPG7-207ENST00000563218 SCN9AQ15858 1988 aa17.47■□□□□ 0.39
SPG7-207ENST00000563218 SPEF2Q9C093 1822 aa17.47■□□□□ 0.39
SPG7-207ENST00000563218 WDR33Q9C0J8 1336 aaKnown RBP17.47■□□□□ 0.39
SPG7-207ENST00000563218 HSPA8P11142 646 aaKnown RBP17.46■□□□□ 0.39
SPG7-207ENST00000563218 TMPOP42166 694 aaKnown RBP17.46■□□□□ 0.39
SPG7-207ENST00000563218 CTCFP49711 727 aaPredicted RBP17.46■□□□□ 0.39
SPG7-207ENST00000563218 CCDC146Q8IYE0 955 aa17.46■□□□□ 0.39
SPG7-207ENST00000563218 XAGE3Q8WTP9 111 aa17.46■□□□□ 0.39
SPG7-207ENST00000563218 AIDAQ96BJ3 306 aa17.46■□□□□ 0.39
SPG7-207ENST00000563218 NLRP3Q96P20 1036 aa17.46■□□□□ 0.39
SPG7-207ENST00000563218 PRDM10Q9NQV6 1147 aa17.46■□□□□ 0.39
SPG7-207ENST00000563218 ATP6V0A2Q9Y487 856 aa17.46■□□□□ 0.39
SPG7-207ENST00000563218 CASP8AP2Q9UKL3 1982 aa17.46■□□□□ 0.39
SPG7-207ENST00000563218 FAM161AQ3B820 660 aa17.45■□□□□ 0.38
SPG7-207ENST00000563218 SLC10A5Q5PT55 438 aa17.45■□□□□ 0.38
SPG7-207ENST00000563218 COPS6Q7L5N1 327 aa17.45■□□□□ 0.38
SPG7-207ENST00000563218 NLRP10Q86W26 655 aa17.45■□□□□ 0.38
SPG7-207ENST00000563218 YTHDC1Q96MU7 727 aaKnown RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms