RNA–Protein interactions for RNA: ENST00000562729.5

CHRFAM7A-204, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 4

Gene CHRFAM7A, Length 573 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-204ENST00000562729 KCNA3P22001 575 aa12.13□□□□□ -0.47
CHRFAM7A-204ENST00000562729 DCAF8Q5TAQ9 597 aa12.13□□□□□ -0.47
CHRFAM7A-204ENST00000562729 CLEC4GQ6UXB4 293 aa12.13□□□□□ -0.47
CHRFAM7A-204ENST00000562729 CCDC24Q8N4L8 307 aa12.13□□□□□ -0.47
CHRFAM7A-204ENST00000562729 TTLL6Q8N841 843 aa12.13□□□□□ -0.47
CHRFAM7A-204ENST00000562729 BRIP1Q9BX63 1249 aa12.13□□□□□ -0.47
CHRFAM7A-204ENST00000562729 BABAM1Q9NWV8 329 aa12.13□□□□□ -0.47
CHRFAM7A-204ENST00000562729 PDZRN3Q9UPQ7 1066 aa12.13□□□□□ -0.47
CHRFAM7A-204ENST00000562729 NIP7Q9Y221 180 aaKnown RBP eCLIP12.13□□□□□ -0.47
CHRFAM7A-204ENST00000562729 BCORQ6W2J9 1755 aa12.13□□□□□ -0.47
CHRFAM7A-204ENST00000562729 NBPF26B4DH59 902 aa12.12□□□□□ -0.47
CHRFAM7A-204ENST00000562729 PRR5LQ6MZQ0 368 aa12.12□□□□□ -0.47
CHRFAM7A-204ENST00000562729 NBPF10Q6P3W6 841 aaKnown RBP12.12□□□□□ -0.47
CHRFAM7A-204ENST00000562729 TPTE2Q6XPS3 522 aa12.12□□□□□ -0.47
CHRFAM7A-204ENST00000562729 NBPF15Q8N660 670 aa12.12□□□□□ -0.47
CHRFAM7A-204ENST00000562729 BRCA1P38398 1863 aaKnown RBP12.12□□□□□ -0.47
CHRFAM7A-204ENST00000562729 NRXN2Q9P2S2 1712 aa12.11□□□□□ -0.47
CHRFAM7A-204ENST00000562729 ARFGEF1Q9Y6D6 1849 aa12.11□□□□□ -0.47
CHRFAM7A-204ENST00000562729 CALD1Q05682 793 aaKnown RBP12.11□□□□□ -0.47
CHRFAM7A-204ENST00000562729 NECTIN2Q92692 538 aa12.11□□□□□ -0.47
CHRFAM7A-204ENST00000562729 VASPP50552 380 aaPredicted RBP12.1□□□□□ -0.47
CHRFAM7A-204ENST00000562729 C9orf131Q5VYM1 1079 aa12.1□□□□□ -0.47
CHRFAM7A-204ENST00000562729 ZBTB3Q9H5J0 574 aa12.1□□□□□ -0.47
CHRFAM7A-204ENST00000562729 RNF181Q9P0P0 153 aa12.1□□□□□ -0.47
CHRFAM7A-204ENST00000562729 ERBB4Q15303 1308 aa12.1□□□□□ -0.47
CHRFAM7A-204ENST00000562729 C1QTNF8P60827 252 aa12.09□□□□□ -0.47
CHRFAM7A-204ENST00000562729 CNKSR1Q969H4 720 aa12.09□□□□□ -0.47
CHRFAM7A-204ENST00000562729 NYXQ9GZU5 481 aa12.09□□□□□ -0.47
CHRFAM7A-204ENST00000562729 OCEL1Q9H607 264 aa12.09□□□□□ -0.47
CHRFAM7A-204ENST00000562729 MAP3K15Q6ZN16 1313 aa12.09□□□□□ -0.47
CHRFAM7A-204ENST00000562729 DLEC1Q9Y238 1755 aa12.08□□□□□ -0.48
CHRFAM7A-204ENST00000562729 ERVV-1B6SEH8 477 aa12.08□□□□□ -0.48
CHRFAM7A-204ENST00000562729 APAF1O14727 1248 aa12.08□□□□□ -0.48
CHRFAM7A-204ENST00000562729 RGL2O15211 777 aa12.08□□□□□ -0.48
CHRFAM7A-204ENST00000562729 GPTP24298 496 aa12.08□□□□□ -0.48
CHRFAM7A-204ENST00000562729 HLFQ16534 295 aa12.08□□□□□ -0.48
CHRFAM7A-204ENST00000562729 MRS2Q9HD23 443 aa12.08□□□□□ -0.48
CHRFAM7A-204ENST00000562729 RTN4Q9NQC3 1192 aaKnown RBP12.08□□□□□ -0.48
CHRFAM7A-204ENST00000562729 PCDHB8Q9UN66 801 aa12.08□□□□□ -0.48
CHRFAM7A-204ENST00000562729 ADCY9O60503 1353 aa12.07□□□□□ -0.48
CHRFAM7A-204ENST00000562729 SENP3-EIF4A1A0A087X0R7 540 aa12.07□□□□□ -0.48
CHRFAM7A-204ENST00000562729 C21orf2O43822 256 aa12.07□□□□□ -0.48
CHRFAM7A-204ENST00000562729 AIMP1Q12904 312 aaKnown RBP12.07□□□□□ -0.48
CHRFAM7A-204ENST00000562729 HDGFL1Q5TGJ6 251 aa12.07□□□□□ -0.48
CHRFAM7A-204ENST00000562729 STYK1Q6J9G0 422 aa12.07□□□□□ -0.48
CHRFAM7A-204ENST00000562729 TTLL7Q6ZT98 887 aa12.07□□□□□ -0.48
CHRFAM7A-204ENST00000562729 C16orf71Q8IYS4 520 aaPredicted RBP12.07□□□□□ -0.48
CHRFAM7A-204ENST00000562729 MASTLQ96GX5 879 aa12.07□□□□□ -0.48
CHRFAM7A-204ENST00000562729 KDM2BQ8NHM5 1336 aa12.07□□□□□ -0.48
CHRFAM7A-204ENST00000562729 ANKRD31Q8N7Z5 1873 aa12.06□□□□□ -0.48
CHRFAM7A-204ENST00000562729 CHL1O00533 1208 aa12.06□□□□□ -0.48
CHRFAM7A-204ENST00000562729 LMNB1P20700 586 aa12.06□□□□□ -0.48
CHRFAM7A-204ENST00000562729 RASSF7Q02833 373 aa12.06□□□□□ -0.48
CHRFAM7A-204ENST00000562729 SOGA3Q5TF21 947 aa12.06□□□□□ -0.48
CHRFAM7A-204ENST00000562729 CFAP44Q96MT7 982 aa12.06□□□□□ -0.48
CHRFAM7A-204ENST00000562729 CACNA1SQ13698 1873 aa12.06□□□□□ -0.48
CHRFAM7A-204ENST00000562729 ANXA1P04083 346 aa12.05□□□□□ -0.48
CHRFAM7A-204ENST00000562729 SRGNP10124 158 aa12.05□□□□□ -0.48
CHRFAM7A-204ENST00000562729 NPR1P16066 1061 aa12.05□□□□□ -0.48
CHRFAM7A-204ENST00000562729 GNAI1P63096 354 aa12.05□□□□□ -0.48
CHRFAM7A-204ENST00000562729 PRPF40BQ6NWY9 871 aaKnown RBP12.05□□□□□ -0.48
CHRFAM7A-204ENST00000562729 PPP1R42Q7Z4L9 355 aa12.05□□□□□ -0.48
CHRFAM7A-204ENST00000562729 RPGRQ92834 1020 aaKnown RBP12.05□□□□□ -0.48
CHRFAM7A-204ENST00000562729 NUP98P52948 1817 aa12.04□□□□□ -0.48
CHRFAM7A-204ENST00000562729 COL11A2P13942 1736 aaPredicted RBP12.04□□□□□ -0.48
CHRFAM7A-204ENST00000562729 ALDH1B1P30837 517 aa12.04□□□□□ -0.48
CHRFAM7A-204ENST00000562729 KRT24Q2M2I5 525 aa12.04□□□□□ -0.48
CHRFAM7A-204ENST00000562729 HSP90AB3PQ58FF7 597 aa12.04□□□□□ -0.48
CHRFAM7A-204ENST00000562729 GIGYF2Q6Y7W6 1299 aaKnown RBP12.04□□□□□ -0.48
CHRFAM7A-204ENST00000562729 COPS6Q7L5N1 327 aa12.04□□□□□ -0.48
CHRFAM7A-204ENST00000562729 NUTM1Q86Y26 1132 aa12.04□□□□□ -0.48
CHRFAM7A-204ENST00000562729 TMX4Q9H1E5 349 aaPredicted RBP12.04□□□□□ -0.48
CHRFAM7A-204ENST00000562729 IFT57Q9NWB7 429 aa12.04□□□□□ -0.48
CHRFAM7A-204ENST00000562729 HOXB7P09629 217 aa12.03□□□□□ -0.48
CHRFAM7A-204ENST00000562729 PROSER3Q2NL68 480 aa12.03□□□□□ -0.48
CHRFAM7A-204ENST00000562729 ERFEQ4G0M1 354 aa12.03□□□□□ -0.48
CHRFAM7A-204ENST00000562729 PARP10Q53GL7 1025 aa12.03□□□□□ -0.48
CHRFAM7A-204ENST00000562729 DUSP27Q5VZP5 1158 aa12.03□□□□□ -0.48
CHRFAM7A-204ENST00000562729 XAGE3Q8WTP9 111 aa12.03□□□□□ -0.48
CHRFAM7A-204ENST00000562729 CHMP4AQ9BY43 222 aa12.03□□□□□ -0.48
CHRFAM7A-204ENST00000562729 TAOK3Q9H2K8 898 aa12.03□□□□□ -0.48
CHRFAM7A-204ENST00000562729 DDX21Q9NR30 783 aaKnown RBP eCLIP12.03□□□□□ -0.48
CHRFAM7A-204ENST00000562729 MBIPQ9NS73 344 aa12.03□□□□□ -0.48
CHRFAM7A-204ENST00000562729 CHPF2Q9P2E5 772 aa12.03□□□□□ -0.48
CHRFAM7A-204ENST00000562729 DBF4Q9UBU7 674 aaPredicted RBP12.03□□□□□ -0.48
CHRFAM7A-204ENST00000562729 ELL2O00472 640 aaPredicted RBP12.02□□□□□ -0.49
CHRFAM7A-204ENST00000562729 CCDC93Q567U6 631 aa12.02□□□□□ -0.49
CHRFAM7A-204ENST00000562729 UTP14AQ9BVJ6 771 aaKnown RBP12.02□□□□□ -0.49
CHRFAM7A-204ENST00000562729 PDIA6Q15084 440 aa12.01□□□□□ -0.49
CHRFAM7A-204ENST00000562729 CCDC184Q52MB2 194 aa12.01□□□□□ -0.49
CHRFAM7A-204ENST00000562729 SUSD4Q5VX71 490 aa12.01□□□□□ -0.49
CHRFAM7A-204ENST00000562729 DPY19L2Q6NUT2 758 aa12.01□□□□□ -0.49
CHRFAM7A-204ENST00000562729 NLRP3Q96P20 1036 aa12.01□□□□□ -0.49
CHRFAM7A-204ENST00000562729 HYPKQ9NX55 129 aa12.01□□□□□ -0.49
CHRFAM7A-204ENST00000562729 UBN2Q6ZU65 1347 aa12.01□□□□□ -0.49
CHRFAM7A-204ENST00000562729 SBF1O95248 1867 aa12□□□□□ -0.49
CHRFAM7A-204ENST00000562729 GOLGA2Q08379 1002 aa12□□□□□ -0.49
CHRFAM7A-204ENST00000562729 IFNLR1Q8IU57 520 aaPredicted RBP12□□□□□ -0.49
CHRFAM7A-204ENST00000562729 ZNF34Q8IZ26 560 aa12□□□□□ -0.49
CHRFAM7A-204ENST00000562729 RBM17Q96I25 401 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms