RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 DZIP1LQ8IYY4 767 aaKnown RBP28.46■■■□□ 2.15
SYNGR3-202ENST00000562045 CRBNQ96SW2 442 aa28.46■■■□□ 2.15
SYNGR3-202ENST00000562045 MYD88Q99836 296 aa28.46■■■□□ 2.15
SYNGR3-202ENST00000562045 F6X3S4 739 aa28.46■■■□□ 2.15
SYNGR3-202ENST00000562045 NLRP10Q86W26 655 aa28.46■■■□□ 2.15
SYNGR3-202ENST00000562045 NBPF5PQ86XG9 351 aaPredicted RBP28.46■■■□□ 2.15
SYNGR3-202ENST00000562045 ISCA1Q9BUE6 129 aa28.46■■■□□ 2.15
SYNGR3-202ENST00000562045 PTPRCP08575 1304 aa28.45■■■□□ 2.14
SYNGR3-202ENST00000562045 EXOC6Q8TAG9 804 aa28.45■■■□□ 2.14
SYNGR3-202ENST00000562045 HSP90AB3PQ58FF7 597 aa28.44■■■□□ 2.14
SYNGR3-202ENST00000562045 NUTM1Q86Y26 1132 aa28.44■■■□□ 2.14
SYNGR3-202ENST00000562045 CNBD1Q8NA66 436 aa28.44■■■□□ 2.14
SYNGR3-202ENST00000562045 PANK1Q8TE04 598 aa28.44■■■□□ 2.14
SYNGR3-202ENST00000562045 CLUAP1Q96AJ1 413 aa28.44■■■□□ 2.14
SYNGR3-202ENST00000562045 METTL22Q9BUU2 404 aaPredicted RBP28.44■■■□□ 2.14
SYNGR3-202ENST00000562045 API5Q9BZZ5 524 aaKnown RBP28.44■■■□□ 2.14
SYNGR3-202ENST00000562045 CD2APQ9Y5K6 639 aa28.44■■■□□ 2.14
SYNGR3-202ENST00000562045 UTRNP46939 3433 aa28.43■■■□□ 2.14
SYNGR3-202ENST00000562045 NTSR2O95665 410 aa28.43■■■□□ 2.14
SYNGR3-202ENST00000562045 TNNQ9UQP3 1299 aa28.43■■■□□ 2.14
SYNGR3-202ENST00000562045 TNRC6CQ9HCJ0 1690 aaKnown RBP28.42■■■□□ 2.14
SYNGR3-202ENST00000562045 IGKV5-2P06315 115 aa28.42■■■□□ 2.14
SYNGR3-202ENST00000562045 SYNE4Q8N205 404 aa28.42■■■□□ 2.14
SYNGR3-202ENST00000562045 ABCC12Q96J65 1359 aa28.42■■■□□ 2.14
SYNGR3-202ENST00000562045 PXDNLA1KZ92 1463 aa28.41■■■□□ 2.14
SYNGR3-202ENST00000562045 RLBP1P12271 317 aa28.41■■■□□ 2.14
SYNGR3-202ENST00000562045 ERFEQ4G0M1 354 aa28.4■■■□□ 2.14
SYNGR3-202ENST00000562045 PARP10Q53GL7 1025 aa28.4■■■□□ 2.14
SYNGR3-202ENST00000562045 TPTE2Q6XPS3 522 aa28.4■■■□□ 2.14
SYNGR3-202ENST00000562045 PPP4R2Q9NY27 417 aa28.4■■■□□ 2.14
SYNGR3-202ENST00000562045 COL11A2P13942 1736 aaPredicted RBP28.4■■■□□ 2.14
SYNGR3-202ENST00000562045 DNAAF4Q8WXU2 420 aa28.4■■■□□ 2.14
SYNGR3-202ENST00000562045 A0A0G2JLW4 131 aa28.39■■■□□ 2.14
SYNGR3-202ENST00000562045 CWF19L2Q2TBE0 894 aaKnown RBP28.39■■■□□ 2.14
SYNGR3-202ENST00000562045 COG6Q9Y2V7 657 aa28.39■■■□□ 2.14
SYNGR3-202ENST00000562045 NPHP1O15259 732 aa28.38■■■□□ 2.13
SYNGR3-202ENST00000562045 WWC3Q9ULE0 1092 aa28.38■■■□□ 2.13
SYNGR3-202ENST00000562045 CHRNA5P30532 468 aa28.38■■■□□ 2.13
SYNGR3-202ENST00000562045 TRIM28Q13263 835 aaKnown RBP28.38■■■□□ 2.13
SYNGR3-202ENST00000562045 UTP14AQ9BVJ6 771 aaKnown RBP28.38■■■□□ 2.13
SYNGR3-202ENST00000562045 IBTKQ9P2D0 1353 aaPredicted RBP28.37■■■□□ 2.13
SYNGR3-202ENST00000562045 PPP1R42Q7Z4L9 355 aa28.37■■■□□ 2.13
SYNGR3-202ENST00000562045 BRCA1P38398 1863 aaKnown RBP28.37■■■□□ 2.13
SYNGR3-202ENST00000562045 ABCC4O15439 1325 aa28.36■■■□□ 2.13
SYNGR3-202ENST00000562045 DPEP1P16444 411 aa28.36■■■□□ 2.13
SYNGR3-202ENST00000562045 ST5P78524 1137 aa28.36■■■□□ 2.13
SYNGR3-202ENST00000562045 MVPQ14764 893 aaKnown RBP28.36■■■□□ 2.13
SYNGR3-202ENST00000562045 RTL5Q5HYW3 569 aaPredicted RBP28.36■■■□□ 2.13
SYNGR3-202ENST00000562045 JARID2Q92833 1246 aaPredicted RBP28.36■■■□□ 2.13
SYNGR3-202ENST00000562045 NYXQ9GZU5 481 aa28.36■■■□□ 2.13
SYNGR3-202ENST00000562045 DDX60Q8IY21 1712 aaKnown RBP28.36■■■□□ 2.13
SYNGR3-202ENST00000562045 KCNA3P22001 575 aa28.35■■■□□ 2.13
SYNGR3-202ENST00000562045 GTF2E1P29083 439 aaPredicted RBP28.35■■■□□ 2.13
SYNGR3-202ENST00000562045 BRIP1Q9BX63 1249 aa28.35■■■□□ 2.13
SYNGR3-202ENST00000562045 TRMT112Q9UI30 125 aaKnown RBP28.35■■■□□ 2.13
SYNGR3-202ENST00000562045 DLEC1Q9Y238 1755 aa28.35■■■□□ 2.13
SYNGR3-202ENST00000562045 LAMB2P55268 1798 aa28.35■■■□□ 2.13
SYNGR3-202ENST00000562045 FAM89AQ96GI7 184 aa28.35■■■□□ 2.13
SYNGR3-202ENST00000562045 NEURL1BA8MQ27 555 aa28.34■■■□□ 2.13
SYNGR3-202ENST00000562045 TGFB2P61812 414 aa28.34■■■□□ 2.13
SYNGR3-202ENST00000562045 BEND3Q5T5X7 828 aa28.34■■■□□ 2.13
SYNGR3-202ENST00000562045 C3orf67Q6ZVT6 689 aa28.34■■■□□ 2.13
SYNGR3-202ENST00000562045 TMEM57Q8N5G2 664 aa28.34■■■□□ 2.13
SYNGR3-202ENST00000562045 SLC4A10Q6U841 1118 aa28.33■■■□□ 2.13
SYNGR3-202ENST00000562045 ITPRIPQ8IWB1 547 aa28.33■■■□□ 2.13
SYNGR3-202ENST00000562045 CCDC191Q8NCU4 936 aa28.33■■■□□ 2.13
SYNGR3-202ENST00000562045 DDX19BQ9UMR2 479 aa28.33■■■□□ 2.13
SYNGR3-202ENST00000562045 NEXNQ0ZGT2 675 aa28.32■■■□□ 2.12
SYNGR3-202ENST00000562045 CWC25Q9NXE8 425 aaPredicted RBP28.32■■■□□ 2.12
SYNGR3-202ENST00000562045 AAMPQ13685 434 aa28.32■■■□□ 2.12
SYNGR3-202ENST00000562045 HCLS1P14317 486 aaPredicted RBP28.31■■■□□ 2.12
SYNGR3-202ENST00000562045 LINS1Q8NG48 757 aa28.31■■■□□ 2.12
SYNGR3-202ENST00000562045 SH3TC1Q8TE82 1336 aa28.31■■■□□ 2.12
SYNGR3-202ENST00000562045 C2CD5Q86YS7 1000 aa28.3■■■□□ 2.12
SYNGR3-202ENST00000562045 CACNA1SQ13698 1873 aa28.29■■■□□ 2.12
SYNGR3-202ENST00000562045 PDE6BP35913 854 aa28.29■■■□□ 2.12
SYNGR3-202ENST00000562045 SLC10A5Q5PT55 438 aa28.29■■■□□ 2.12
SYNGR3-202ENST00000562045 KLRG2A4D1S0 409 aaPredicted RBP28.28■■■□□ 2.12
SYNGR3-202ENST00000562045 GCKRQ14397 625 aa28.28■■■□□ 2.12
SYNGR3-202ENST00000562045 ZBTB38Q8NAP3 1195 aaPredicted RBP28.28■■■□□ 2.12
SYNGR3-202ENST00000562045 RIC1Q4ADV7 1423 aa28.28■■■□□ 2.12
SYNGR3-202ENST00000562045 INTS3Q68E01 1043 aaKnown RBP28.27■■■□□ 2.12
SYNGR3-202ENST00000562045 CHMP4BQ9H444 224 aaKnown RBP28.27■■■□□ 2.12
SYNGR3-202ENST00000562045 PCCAP05165 728 aaPredicted RBP28.26■■■□□ 2.12
SYNGR3-202ENST00000562045 SRGNP10124 158 aa28.26■■■□□ 2.12
SYNGR3-202ENST00000562045 H0YIN7 160 aa28.26■■■□□ 2.11
SYNGR3-202ENST00000562045 CCDC136Q96JN2 1154 aa28.26■■■□□ 2.11
SYNGR3-202ENST00000562045 YBX3P16989 372 aaKnown RBP eCLIP28.25■■■□□ 2.111e-6■■■□□ 16.9
SYNGR3-202ENST00000562045 TAF1P21675 1872 aa28.25■■■□□ 2.11
SYNGR3-202ENST00000562045 CRY2Q49AN0 593 aa28.24■■■□□ 2.11
SYNGR3-202ENST00000562045 SRCIN1Q9C0H9 1055 aa28.24■■■□□ 2.11
SYNGR3-202ENST00000562045 H7C1W4 665 aa28.23■■■□□ 2.11
SYNGR3-202ENST00000562045 IRS4O14654 1257 aaPredicted RBP28.23■■■□□ 2.11
SYNGR3-202ENST00000562045 CCT4P50991 539 aaKnown RBP28.23■■■□□ 2.11
SYNGR3-202ENST00000562045 PELP1Q8IZL8 1130 aaKnown RBP28.23■■■□□ 2.11
SYNGR3-202ENST00000562045 CASP7P55210 303 aa28.23■■■□□ 2.11
SYNGR3-202ENST00000562045 B4GALNT3Q6L9W6 998 aa28.23■■■□□ 2.11
SYNGR3-202ENST00000562045 UBE3BQ7Z3V4 1068 aa28.23■■■□□ 2.11
SYNGR3-202ENST00000562045 SLX4Q8IY92 1834 aa28.23■■■□□ 2.11
SYNGR3-202ENST00000562045 ZNF622Q969S3 477 aaKnown RBP eCLIP28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms