RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 SH3TC1Q8TE82 1336 aa15.29■□□□□ 0.04
RABGGTA-215ENST00000560207 ALDH1L1O75891 902 aa15.29■□□□□ 0.04
RABGGTA-215ENST00000560207 SLC10A5Q5PT55 438 aa15.29■□□□□ 0.04
RABGGTA-215ENST00000560207 PRR5LQ6MZQ0 368 aa15.29■□□□□ 0.04
RABGGTA-215ENST00000560207 MYD88Q99836 296 aa15.29■□□□□ 0.04
RABGGTA-215ENST00000560207 SYT17Q9BSW7 474 aa15.29■□□□□ 0.04
RABGGTA-215ENST00000560207 FHDC1Q9C0D6 1143 aaPredicted RBP15.29■□□□□ 0.04
RABGGTA-215ENST00000560207 GPTP24298 496 aa15.28■□□□□ 0.04
RABGGTA-215ENST00000560207 YTHDC1Q96MU7 727 aaKnown RBP15.28■□□□□ 0.04
RABGGTA-215ENST00000560207 TRMT112Q9UI30 125 aaKnown RBP15.28■□□□□ 0.04
RABGGTA-215ENST00000560207 ANKRD31Q8N7Z5 1873 aa15.28■□□□□ 0.04
RABGGTA-215ENST00000560207 BRCA1P38398 1863 aaKnown RBP15.27■□□□□ 0.04
RABGGTA-215ENST00000560207 UBN2Q6ZU65 1347 aa15.27■□□□□ 0.04
RABGGTA-215ENST00000560207 H0YIN7 160 aa15.27■□□□□ 0.04
RABGGTA-215ENST00000560207 NTSR2O95665 410 aa15.27■□□□□ 0.04
RABGGTA-215ENST00000560207 PCCAP05165 728 aaPredicted RBP15.27■□□□□ 0.04
RABGGTA-215ENST00000560207 CCT4P50991 539 aaKnown RBP15.27■□□□□ 0.04
RABGGTA-215ENST00000560207 SUSD4Q5VX71 490 aa15.27■□□□□ 0.04
RABGGTA-215ENST00000560207 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.27■□□□□ 0.04
RABGGTA-215ENST00000560207 ZBTB38Q8NAP3 1195 aaPredicted RBP15.27■□□□□ 0.04
RABGGTA-215ENST00000560207 SRCIN1Q9C0H9 1055 aa15.27■□□□□ 0.04
RABGGTA-215ENST00000560207 KLRG2A4D1S0 409 aaPredicted RBP15.26■□□□□ 0.03
RABGGTA-215ENST00000560207 NEURL1BA8MQ27 555 aa15.26■□□□□ 0.03
RABGGTA-215ENST00000560207 ZKSCAN2Q63HK3 967 aa15.26■□□□□ 0.03
RABGGTA-215ENST00000560207 NLRP3Q96P20 1036 aa15.26■□□□□ 0.03
RABGGTA-215ENST00000560207 RCAN3Q9UKA8 241 aa15.26■□□□□ 0.03
RABGGTA-215ENST00000560207 CDHR2Q9BYE9 1310 aa15.25■□□□□ 0.03
RABGGTA-215ENST00000560207 ATP5J2-PTCD1G3V325 749 aa15.25■□□□□ 0.03
RABGGTA-215ENST00000560207 BEND3Q5T5X7 828 aa15.25■□□□□ 0.03
RABGGTA-215ENST00000560207 ATF7IPQ6VMQ6 1270 aa15.25■□□□□ 0.03
RABGGTA-215ENST00000560207 KLHL34Q8N239 644 aa15.25■□□□□ 0.03
RABGGTA-215ENST00000560207 BCL2L13Q9BXK5 485 aa15.25■□□□□ 0.03
RABGGTA-215ENST00000560207 NOB1Q9ULX3 412 aaKnown RBP15.25■□□□□ 0.03
RABGGTA-215ENST00000560207 KIAA1551Q9HCM1 1747 aa15.25■□□□□ 0.03
RABGGTA-215ENST00000560207 ARFGEF1Q9Y6D6 1849 aa15.24■□□□□ 0.03
RABGGTA-215ENST00000560207 DDX60Q8IY21 1712 aaKnown RBP15.24■□□□□ 0.03
RABGGTA-215ENST00000560207 IGKV5-2P06315 115 aa15.24■□□□□ 0.03
RABGGTA-215ENST00000560207 ALDH1B1P30837 517 aa15.24■□□□□ 0.03
RABGGTA-215ENST00000560207 GCKRQ14397 625 aa15.24■□□□□ 0.03
RABGGTA-215ENST00000560207 PIM2Q9P1W9 311 aa15.24■□□□□ 0.03
RABGGTA-215ENST00000560207 STYK1Q6J9G0 422 aa15.23■□□□□ 0.03
RABGGTA-215ENST00000560207 SLC4A10Q6U841 1118 aa15.23■□□□□ 0.03
RABGGTA-215ENST00000560207 CNKSR1Q969H4 720 aa15.23■□□□□ 0.03
RABGGTA-215ENST00000560207 MASTLQ96GX5 879 aa15.23■□□□□ 0.03
RABGGTA-215ENST00000560207 C9orf78Q9NZ63 289 aaPredicted RBP15.23■□□□□ 0.03
RABGGTA-215ENST00000560207 FAM177BA6PVY3 158 aa15.22■□□□□ 0.03
RABGGTA-215ENST00000560207 F6X3S4 739 aa15.22■□□□□ 0.03
RABGGTA-215ENST00000560207 H7C1W4 665 aa15.22■□□□□ 0.03
RABGGTA-215ENST00000560207 NPR1P16066 1061 aa15.22■□□□□ 0.03
RABGGTA-215ENST00000560207 CRY2Q49AN0 593 aa15.22■□□□□ 0.03
RABGGTA-215ENST00000560207 ERFEQ4G0M1 354 aa15.22■□□□□ 0.03
RABGGTA-215ENST00000560207 C2CD5Q86YS7 1000 aa15.22■□□□□ 0.03
RABGGTA-215ENST00000560207 FRAT1Q92837 279 aaPredicted RBP15.22■□□□□ 0.03
RABGGTA-215ENST00000560207 CHMP4BQ9H444 224 aaKnown RBP15.22■□□□□ 0.03
RABGGTA-215ENST00000560207 IRS4O14654 1257 aaPredicted RBP15.21■□□□□ 0.03
RABGGTA-215ENST00000560207 PDE8AO60658 829 aa15.21■□□□□ 0.03
RABGGTA-215ENST00000560207 BCAR3O75815 825 aa15.21■□□□□ 0.03
RABGGTA-215ENST00000560207 SRGNP10124 158 aa15.21■□□□□ 0.03
RABGGTA-215ENST00000560207 HOXA10P31260 410 aaPredicted RBP15.21■□□□□ 0.03
RABGGTA-215ENST00000560207 CWF19L2Q2TBE0 894 aaKnown RBP15.21■□□□□ 0.03
RABGGTA-215ENST00000560207 GRIPAP1Q4V328 841 aa15.21■□□□□ 0.03
RABGGTA-215ENST00000560207 INTS3Q68E01 1043 aaKnown RBP15.21■□□□□ 0.03
RABGGTA-215ENST00000560207 TMC4Q7Z404 712 aa15.21■□□□□ 0.03
RABGGTA-215ENST00000560207 NUTM1Q86Y26 1132 aa15.21■□□□□ 0.03
RABGGTA-215ENST00000560207 RPGRQ92834 1020 aaKnown RBP15.21■□□□□ 0.03
RABGGTA-215ENST00000560207 FAM89AQ96GI7 184 aa15.21■□□□□ 0.03
RABGGTA-215ENST00000560207 RBM17Q96I25 401 aaKnown RBP15.21■□□□□ 0.03
RABGGTA-215ENST00000560207 PLA2G12BQ9BX93 195 aa15.21■□□□□ 0.03
RABGGTA-215ENST00000560207 GRM8O00222 908 aa15.2■□□□□ 0.02
RABGGTA-215ENST00000560207 GRIN3BO60391 1043 aa15.2■□□□□ 0.02
RABGGTA-215ENST00000560207 SF3B3Q15393 1217 aaKnown RBP15.2■□□□□ 0.02
RABGGTA-215ENST00000560207 SOGA3Q5TF21 947 aa15.2■□□□□ 0.02
RABGGTA-215ENST00000560207 FTSJ3Q8IY81 847 aaKnown RBP15.2■□□□□ 0.02
RABGGTA-215ENST00000560207 TTLL6Q8N841 843 aa15.2■□□□□ 0.02
RABGGTA-215ENST00000560207 CRAMP1Q96RY5 1269 aa15.2■□□□□ 0.02
RABGGTA-215ENST00000560207 COL11A2P13942 1736 aaPredicted RBP15.2■□□□□ 0.02
RABGGTA-215ENST00000560207 UTYO14607 1347 aa15.19■□□□□ 0.02
RABGGTA-215ENST00000560207 ABCC4O15439 1325 aa15.19■□□□□ 0.02
RABGGTA-215ENST00000560207 TRIM27P14373 513 aa15.19■□□□□ 0.02
RABGGTA-215ENST00000560207 DPEP1P16444 411 aa15.19■□□□□ 0.02
RABGGTA-215ENST00000560207 DALRD3Q5D0E6 543 aaKnown RBP15.19■□□□□ 0.02
RABGGTA-215ENST00000560207 TMX4Q9H1E5 349 aaPredicted RBP15.19■□□□□ 0.02
RABGGTA-215ENST00000560207 CACNA1SQ13698 1873 aa15.18■□□□□ 0.02
RABGGTA-215ENST00000560207 A0A0G2JLW4 131 aa15.18■□□□□ 0.02
RABGGTA-215ENST00000560207 GNAI3P08754 354 aa15.18■□□□□ 0.02
RABGGTA-215ENST00000560207 CCDC152Q4G0S7 254 aa15.18■□□□□ 0.02
RABGGTA-215ENST00000560207 CC2D2BQ6DHV5 1058 aa15.18■□□□□ 0.02
RABGGTA-215ENST00000560207 DDX46Q7L014 1031 aaKnown RBP15.18■□□□□ 0.02
RABGGTA-215ENST00000560207 UBE3BQ7Z3V4 1068 aa15.18■□□□□ 0.02
RABGGTA-215ENST00000560207 DZIP1LQ8IYY4 767 aaKnown RBP15.18■□□□□ 0.02
RABGGTA-215ENST00000560207 ABCC12Q96J65 1359 aa15.18■□□□□ 0.02
RABGGTA-215ENST00000560207 TNRC6CQ9HCJ0 1690 aaKnown RBP15.18■□□□□ 0.02
RABGGTA-215ENST00000560207 RTL9Q8NET4 1388 aa15.17■□□□□ 0.02
RABGGTA-215ENST00000560207 BBOX1O75936 387 aa15.17■□□□□ 0.02
RABGGTA-215ENST00000560207 KCNA3P22001 575 aa15.17■□□□□ 0.02
RABGGTA-215ENST00000560207 PDE3AQ14432 1141 aa15.17■□□□□ 0.02
RABGGTA-215ENST00000560207 NLGN2Q8NFZ4 835 aa15.17■□□□□ 0.02
RABGGTA-215ENST00000560207 ZNF622Q969S3 477 aaKnown RBP eCLIP15.17■□□□□ 0.02
RABGGTA-215ENST00000560207 CHD4Q14839 1912 aa15.16■□□□□ 0.02
RABGGTA-215ENST00000560207 HCLS1P14317 486 aaPredicted RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms