RNA–Protein interactions for RNA: ENST00000559179.1

TRPM1-210, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 1 (best) BASIC

Gene TRPM1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-210ENST00000559179 LARGE2Q8N3Y3 721 aa16.3■□□□□ 0.2
TRPM1-210ENST00000559179 RBM17Q96I25 401 aaKnown RBP16.3■□□□□ 0.2
TRPM1-210ENST00000559179 PNNQ9H307 717 aaKnown RBP16.3■□□□□ 0.2
TRPM1-210ENST00000559179 MAP3K15Q6ZN16 1313 aa16.29■□□□□ 0.2
TRPM1-210ENST00000559179 FZD9O00144 591 aa16.29■□□□□ 0.2
TRPM1-210ENST00000559179 ITGBL1O95965 494 aaPredicted RBP16.29■□□□□ 0.2
TRPM1-210ENST00000559179 CTCFP49711 727 aaPredicted RBP16.29■□□□□ 0.2
TRPM1-210ENST00000559179 GRM1Q13255 1194 aa16.28■□□□□ 0.2
TRPM1-210ENST00000559179 TTLL7Q6ZT98 887 aa16.28■□□□□ 0.2
TRPM1-210ENST00000559179 PSMD1Q99460 953 aa16.28■□□□□ 0.2
TRPM1-210ENST00000559179 PPEF1O14829 653 aaPredicted RBP16.27■□□□□ 0.2
TRPM1-210ENST00000559179 SUSD4Q5VX71 490 aa16.27■□□□□ 0.2
TRPM1-210ENST00000559179 PPP1R42Q7Z4L9 355 aa16.27■□□□□ 0.2
TRPM1-210ENST00000559179 NIM1KQ8IY84 436 aa16.27■□□□□ 0.2
TRPM1-210ENST00000559179 THUMPD2Q9BTF0 503 aaKnown RBP16.27■□□□□ 0.2
TRPM1-210ENST00000559179 LAMB4A4D0S4 1761 aa16.27■□□□□ 0.2
TRPM1-210ENST00000559179 ABCC12Q96J65 1359 aa16.26■□□□□ 0.19
TRPM1-210ENST00000559179 EIF2S2P20042 333 aaKnown RBP16.26■□□□□ 0.19
TRPM1-210ENST00000559179 EIF4A1P60842 406 aaKnown RBP16.26■□□□□ 0.19
TRPM1-210ENST00000559179 NFE2L2Q16236 605 aa16.26■□□□□ 0.19
TRPM1-210ENST00000559179 GRIPAP1Q4V328 841 aa16.26■□□□□ 0.19
TRPM1-210ENST00000559179 NLRP3Q96P20 1036 aa16.26■□□□□ 0.19
TRPM1-210ENST00000559179 PRDM10Q9NQV6 1147 aa16.26■□□□□ 0.19
TRPM1-210ENST00000559179 NUP98P52948 1817 aa16.26■□□□□ 0.19
TRPM1-210ENST00000559179 LBX1P52954 281 aa16.25■□□□□ 0.19
TRPM1-210ENST00000559179 CRY2Q49AN0 593 aa16.25■□□□□ 0.19
TRPM1-210ENST00000559179 BEGAINQ9BUH8 593 aa16.25■□□□□ 0.19
TRPM1-210ENST00000559179 WDR33Q9C0J8 1336 aaKnown RBP16.24■□□□□ 0.19
TRPM1-210ENST00000559179 DLG5Q8TDM6 1919 aa16.24■□□□□ 0.19
TRPM1-210ENST00000559179 PPIP5K2O43314 1243 aa16.24■□□□□ 0.19
TRPM1-210ENST00000559179 CRAMP1Q96RY5 1269 aa16.24■□□□□ 0.19
TRPM1-210ENST00000559179 TSPYL4Q9UJ04 414 aa16.24■□□□□ 0.19
TRPM1-210ENST00000559179 HOXA10P31260 410 aaPredicted RBP16.23■□□□□ 0.19
TRPM1-210ENST00000559179 EPS15P42566 896 aa16.23■□□□□ 0.19
TRPM1-210ENST00000559179 MAP2K1Q02750 393 aaPredicted RBP16.23■□□□□ 0.19
TRPM1-210ENST00000559179 DDX21Q9NR30 783 aaKnown RBP eCLIP16.23■□□□□ 0.19
TRPM1-210ENST00000559179 UBN2Q6ZU65 1347 aa16.22■□□□□ 0.19
TRPM1-210ENST00000559179 RASSF10A6NK89 507 aa16.22■□□□□ 0.19
TRPM1-210ENST00000559179 PARP10Q53GL7 1025 aa16.22■□□□□ 0.19
TRPM1-210ENST00000559179 GIGYF2Q6Y7W6 1299 aaKnown RBP16.22■□□□□ 0.19
TRPM1-210ENST00000559179 ZNF34Q8IZ26 560 aa16.22■□□□□ 0.19
TRPM1-210ENST00000559179 UTP14AQ9BVJ6 771 aaKnown RBP16.22■□□□□ 0.19
TRPM1-210ENST00000559179 WBP1LQ9NX94 342 aa16.22■□□□□ 0.19
TRPM1-210ENST00000559179 KDM3BQ7LBC6 1761 aa16.21■□□□□ 0.19
TRPM1-210ENST00000559179 ECE1P42892 770 aa16.21■□□□□ 0.19
TRPM1-210ENST00000559179 AIMP1Q12904 312 aaKnown RBP16.21■□□□□ 0.19
TRPM1-210ENST00000559179 AOC3Q16853 763 aa16.21■□□□□ 0.19
TRPM1-210ENST00000559179 USP50Q70EL3 339 aaPredicted RBP16.21■□□□□ 0.19
TRPM1-210ENST00000559179 SUPT20HQ8NEM7 779 aa16.21■□□□□ 0.19
TRPM1-210ENST00000559179 NECTIN2Q92692 538 aa16.21■□□□□ 0.19
TRPM1-210ENST00000559179 NTSR2O95665 410 aa16.2■□□□□ 0.18
TRPM1-210ENST00000559179 RIPK4P57078 832 aa16.2■□□□□ 0.18
TRPM1-210ENST00000559179 PLEKHF1Q96S99 279 aa16.2■□□□□ 0.18
TRPM1-210ENST00000559179 BCL2L13Q9BXK5 485 aa16.2■□□□□ 0.18
TRPM1-210ENST00000559179 IBTKQ9P2D0 1353 aaPredicted RBP16.2■□□□□ 0.18
TRPM1-210ENST00000559179 ERBB4Q15303 1308 aa16.19■□□□□ 0.18
TRPM1-210ENST00000559179 SCNN1DP51172 638 aa16.19■□□□□ 0.18
TRPM1-210ENST00000559179 DPP8Q6V1X1 898 aaPredicted RBP16.19■□□□□ 0.18
TRPM1-210ENST00000559179 CAPNS2Q96L46 248 aa16.19■□□□□ 0.18
TRPM1-210ENST00000559179 ADAMTSL1Q8N6G6 1762 aa16.18■□□□□ 0.18
TRPM1-210ENST00000559179 TRAF5O00463 557 aa16.18■□□□□ 0.18
TRPM1-210ENST00000559179 ANXA1P04083 346 aa16.18■□□□□ 0.18
TRPM1-210ENST00000559179 FMR1Q06787 632 aaKnown RBP eCLIP16.18■□□□□ 0.18
TRPM1-210ENST00000559179 HSP90AB3PQ58FF7 597 aa16.18■□□□□ 0.18
TRPM1-210ENST00000559179 CYP4F22Q6NT55 531 aa16.18■□□□□ 0.18
TRPM1-210ENST00000559179 C3orf67Q6ZVT6 689 aa16.18■□□□□ 0.18
TRPM1-210ENST00000559179 DDX46Q7L014 1031 aaKnown RBP16.18■□□□□ 0.18
TRPM1-210ENST00000559179 MPNDQ8N594 471 aa16.18■□□□□ 0.18
TRPM1-210ENST00000559179 ADARB2Q9NS39 739 aaKnown RBP16.18■□□□□ 0.18
TRPM1-210ENST00000559179 ZNRF3Q9ULT6 936 aa16.18■□□□□ 0.18
TRPM1-210ENST00000559179 ATP6V0A2Q9Y487 856 aa16.18■□□□□ 0.18
TRPM1-210ENST00000559179 HSPA8P11142 646 aaKnown RBP16.17■□□□□ 0.18
TRPM1-210ENST00000559179 SLC51AQ86UW1 340 aa16.17■□□□□ 0.18
TRPM1-210ENST00000559179 GPR101Q96P66 508 aaPredicted RBP16.17■□□□□ 0.18
TRPM1-210ENST00000559179 VPS33BQ9H267 617 aa16.17■□□□□ 0.18
TRPM1-210ENST00000559179 ZNF408Q9H9D4 720 aa16.17■□□□□ 0.18
TRPM1-210ENST00000559179 LAS1LQ9Y4W2 734 aaKnown RBP16.17■□□□□ 0.18
TRPM1-210ENST00000559179 RIC1Q4ADV7 1423 aa16.17■□□□□ 0.18
TRPM1-210ENST00000559179 PCNTO95613 3336 aa16.16■□□□□ 0.18
TRPM1-210ENST00000559179 BBOX1O75936 387 aa16.16■□□□□ 0.18
TRPM1-210ENST00000559179 HCLS1P14317 486 aaPredicted RBP16.16■□□□□ 0.18
TRPM1-210ENST00000559179 LMOD3Q0VAK6 560 aa16.16■□□□□ 0.18
TRPM1-210ENST00000559179 NEUROD2Q15784 382 aa16.16■□□□□ 0.18
TRPM1-210ENST00000559179 COPS6Q7L5N1 327 aa16.16■□□□□ 0.18
TRPM1-210ENST00000559179 GPRC5DQ9NZD1 345 aa16.16■□□□□ 0.18
TRPM1-210ENST00000559179 TRMT112Q9UI30 125 aaKnown RBP16.16■□□□□ 0.18
TRPM1-210ENST00000559179 ABCC4O15439 1325 aa16.16■□□□□ 0.18
TRPM1-210ENST00000559179 COL4A5P29400 1685 aa16.15■□□□□ 0.18
TRPM1-210ENST00000559179 GMPSP49915 693 aaPredicted RBP16.15■□□□□ 0.18
TRPM1-210ENST00000559179 CXCL9Q07325 125 aa16.15■□□□□ 0.18
TRPM1-210ENST00000559179 TNIP1Q15025 636 aa16.15■□□□□ 0.18
TRPM1-210ENST00000559179 SLC10A5Q5PT55 438 aa16.15■□□□□ 0.18
TRPM1-210ENST00000559179 CIAPIN1Q6FI81 312 aa16.15■□□□□ 0.18
TRPM1-210ENST00000559179 SP8Q8IXZ3 490 aa16.15■□□□□ 0.18
TRPM1-210ENST00000559179 ZNF428Q96B54 188 aa16.15■□□□□ 0.18
TRPM1-210ENST00000559179 SNED1Q8TER0 1413 aa16.14■□□□□ 0.17
TRPM1-210ENST00000559179 RAD17O75943 681 aa16.14■□□□□ 0.17
TRPM1-210ENST00000559179 CELF2O95319 508 aaKnown RBP16.14■□□□□ 0.17
TRPM1-210ENST00000559179 PROSER3Q2NL68 480 aa16.14■□□□□ 0.17
TRPM1-210ENST00000559179 XAGE3Q8WTP9 111 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms