RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 BEGAINQ9BUH8 593 aa21.19■□□□□ 0.98
CDC42BPB-203ENST00000558867 GJA3Q9Y6H8 435 aa21.19■□□□□ 0.98
CDC42BPB-203ENST00000558867 HLFQ16534 295 aa21.18■□□□□ 0.98
CDC42BPB-203ENST00000558867 WDR33Q9C0J8 1336 aaKnown RBP21.18■□□□□ 0.98
CDC42BPB-203ENST00000558867 DCTN1Q14203 1278 aa21.17■□□□□ 0.98
CDC42BPB-203ENST00000558867 CRY2Q49AN0 593 aa21.17■□□□□ 0.98
CDC42BPB-203ENST00000558867 NGEFQ8N5V2 710 aa21.17■□□□□ 0.98
CDC42BPB-203ENST00000558867 ECE1P42892 770 aa21.16■□□□□ 0.98
CDC42BPB-203ENST00000558867 LARGE2Q8N3Y3 721 aa21.16■□□□□ 0.98
CDC42BPB-203ENST00000558867 RBM17Q96I25 401 aaKnown RBP21.16■□□□□ 0.98
CDC42BPB-203ENST00000558867 DDX21Q9NR30 783 aaKnown RBP eCLIP21.16■□□□□ 0.98
CDC42BPB-203ENST00000558867 MAP3K15Q6ZN16 1313 aa21.15■□□□□ 0.98
CDC42BPB-203ENST00000558867 HOXA10P31260 410 aaPredicted RBP21.15■□□□□ 0.98
CDC42BPB-203ENST00000558867 ADAMTSL1Q8N6G6 1762 aa21.15■□□□□ 0.98
CDC42BPB-203ENST00000558867 PAXIP1Q6ZW49 1069 aaPredicted RBP21.14■□□□□ 0.97
CDC42BPB-203ENST00000558867 USP50Q70EL3 339 aaPredicted RBP21.14■□□□□ 0.97
CDC42BPB-203ENST00000558867 NUTM1Q86Y26 1132 aa21.14■□□□□ 0.97
CDC42BPB-203ENST00000558867 RRP7AQ9Y3A4 280 aaKnown RBP21.14■□□□□ 0.97
CDC42BPB-203ENST00000558867 IBTKQ9P2D0 1353 aaPredicted RBP21.13■□□□□ 0.97
CDC42BPB-203ENST00000558867 PPP2R1AP30153 589 aa21.13■□□□□ 0.97
CDC42BPB-203ENST00000558867 NIM1KQ8IY84 436 aa21.13■□□□□ 0.97
CDC42BPB-203ENST00000558867 CRAMP1Q96RY5 1269 aa21.13■□□□□ 0.97
CDC42BPB-203ENST00000558867 HSPA8P11142 646 aaKnown RBP21.12■□□□□ 0.97
CDC42BPB-203ENST00000558867 PPP1R42Q7Z4L9 355 aa21.12■□□□□ 0.97
CDC42BPB-203ENST00000558867 VPS33BQ9H267 617 aa21.12■□□□□ 0.97
CDC42BPB-203ENST00000558867 MIS18AQ9NYP9 233 aa21.12■□□□□ 0.97
CDC42BPB-203ENST00000558867 RIC1Q4ADV7 1423 aa21.12■□□□□ 0.97
CDC42BPB-203ENST00000558867 PPEF1O14829 653 aaPredicted RBP21.11■□□□□ 0.97
CDC42BPB-203ENST00000558867 MIER1Q8N108 512 aa21.11■□□□□ 0.97
CDC42BPB-203ENST00000558867 ABCC12Q96J65 1359 aa21.1■□□□□ 0.97
CDC42BPB-203ENST00000558867 LAMB4A4D0S4 1761 aa21.1■□□□□ 0.97
CDC42BPB-203ENST00000558867 NLRP3Q96P20 1036 aa21.1■□□□□ 0.97
CDC42BPB-203ENST00000558867 PNNQ9H307 717 aaKnown RBP21.1■□□□□ 0.97
CDC42BPB-203ENST00000558867 MYL6BP14649 208 aa21.09■□□□□ 0.97
CDC42BPB-203ENST00000558867 GPTP24298 496 aa21.09■□□□□ 0.97
CDC42BPB-203ENST00000558867 DDX10Q13206 875 aaKnown RBP21.09■□□□□ 0.97
CDC42BPB-203ENST00000558867 PARP10Q53GL7 1025 aa21.09■□□□□ 0.97
CDC42BPB-203ENST00000558867 SUPT20HQ8NEM7 779 aa21.09■□□□□ 0.97
CDC42BPB-203ENST00000558867 ABHD8Q96I13 439 aa21.09■□□□□ 0.97
CDC42BPB-203ENST00000558867 CAPNS2Q96L46 248 aa21.09■□□□□ 0.97
CDC42BPB-203ENST00000558867 GPR101Q96P66 508 aaPredicted RBP21.09■□□□□ 0.97
CDC42BPB-203ENST00000558867 PPIP5K2O43314 1243 aa21.08■□□□□ 0.97
CDC42BPB-203ENST00000558867 EPS15P42566 896 aa21.08■□□□□ 0.97
CDC42BPB-203ENST00000558867 SCNN1DP51172 638 aa21.08■□□□□ 0.97
CDC42BPB-203ENST00000558867 SNED1Q8TER0 1413 aa21.08■□□□□ 0.97
CDC42BPB-203ENST00000558867 ZBTB3Q9H5J0 574 aa21.08■□□□□ 0.97
CDC42BPB-203ENST00000558867 ADARB2Q9NS39 739 aaKnown RBP21.08■□□□□ 0.97
CDC42BPB-203ENST00000558867 NUP98P52948 1817 aa21.08■□□□□ 0.96
CDC42BPB-203ENST00000558867 ERBB4Q15303 1308 aa21.07■□□□□ 0.96
CDC42BPB-203ENST00000558867 TCERG1O14776 1098 aaKnown RBP21.07■□□□□ 0.96
CDC42BPB-203ENST00000558867 EIF4A1P60842 406 aaKnown RBP21.07■□□□□ 0.96
CDC42BPB-203ENST00000558867 GRM1Q13255 1194 aa21.07■□□□□ 0.96
CDC42BPB-203ENST00000558867 SUSD4Q5VX71 490 aa21.07■□□□□ 0.96
CDC42BPB-203ENST00000558867 TTLL7Q6ZT98 887 aa21.07■□□□□ 0.96
CDC42BPB-203ENST00000558867 MAP2K2P36507 400 aa21.06■□□□□ 0.96
CDC42BPB-203ENST00000558867 GIGYF2Q6Y7W6 1299 aaKnown RBP21.06■□□□□ 0.96
CDC42BPB-203ENST00000558867 ZNF34Q8IZ26 560 aa21.06■□□□□ 0.96
CDC42BPB-203ENST00000558867 UBN2Q6ZU65 1347 aa21.04■□□□□ 0.96
CDC42BPB-203ENST00000558867 NTSR2O95665 410 aa21.04■□□□□ 0.96
CDC42BPB-203ENST00000558867 CYP4F22Q6NT55 531 aa21.04■□□□□ 0.96
CDC42BPB-203ENST00000558867 ZNRF3Q9ULT6 936 aa21.04■□□□□ 0.96
CDC42BPB-203ENST00000558867 ATP6V0A2Q9Y487 856 aa21.04■□□□□ 0.96
CDC42BPB-203ENST00000558867 TLL2Q9Y6L7 1015 aa21.04■□□□□ 0.96
CDC42BPB-203ENST00000558867 MAPK8IP3Q9UPT6 1336 aa21.04■□□□□ 0.96
CDC42BPB-203ENST00000558867 CA12O43570 354 aa21.03■□□□□ 0.96
CDC42BPB-203ENST00000558867 UTP14AQ9BVJ6 771 aaKnown RBP21.03■□□□□ 0.96
CDC42BPB-203ENST00000558867 GPRC5DQ9NZD1 345 aa21.03■□□□□ 0.96
CDC42BPB-203ENST00000558867 BBOX1O75936 387 aa21.02■□□□□ 0.96
CDC42BPB-203ENST00000558867 TNIP1Q15025 636 aa21.02■□□□□ 0.96
CDC42BPB-203ENST00000558867 NFE2L2Q16236 605 aa21.02■□□□□ 0.96
CDC42BPB-203ENST00000558867 AOC3Q16853 763 aa21.02■□□□□ 0.96
CDC42BPB-203ENST00000558867 TRPM7Q96QT4 1865 aa21.02■□□□□ 0.96
CDC42BPB-203ENST00000558867 KDM3BQ7LBC6 1761 aa21.02■□□□□ 0.96
CDC42BPB-203ENST00000558867 CDHR2Q9BYE9 1310 aa21.02■□□□□ 0.95
CDC42BPB-203ENST00000558867 CCDC85CA6NKD9 419 aa21.01■□□□□ 0.95
CDC42BPB-203ENST00000558867 HSP90AB3PQ58FF7 597 aa21.01■□□□□ 0.95
CDC42BPB-203ENST00000558867 CST9Q5W186 159 aa21.01■□□□□ 0.95
CDC42BPB-203ENST00000558867 DPP8Q6V1X1 898 aaPredicted RBP21.01■□□□□ 0.95
CDC42BPB-203ENST00000558867 BCL2L13Q9BXK5 485 aa21.01■□□□□ 0.95
CDC42BPB-203ENST00000558867 COL4A5P29400 1685 aa21■□□□□ 0.95
CDC42BPB-203ENST00000558867 TRAF5O00463 557 aa21■□□□□ 0.95
CDC42BPB-203ENST00000558867 SLC10A5Q5PT55 438 aa21■□□□□ 0.95
CDC42BPB-203ENST00000558867 CIAPIN1Q6FI81 312 aa21■□□□□ 0.95
CDC42BPB-203ENST00000558867 ZC3H15Q8WU90 426 aaKnown RBP21■□□□□ 0.95
CDC42BPB-203ENST00000558867 HHIPL1Q96JK4 782 aa21■□□□□ 0.95
CDC42BPB-203ENST00000558867 LTBP1Q14766 1721 aa21■□□□□ 0.95
CDC42BPB-203ENST00000558867 CELF2O95319 508 aaKnown RBP20.99■□□□□ 0.95
CDC42BPB-203ENST00000558867 FMR1Q06787 632 aaKnown RBP eCLIP20.99■□□□□ 0.95
CDC42BPB-203ENST00000558867 CXCL9Q07325 125 aa20.99■□□□□ 0.95
CDC42BPB-203ENST00000558867 FAM161AQ3B820 660 aa20.99■□□□□ 0.95
CDC42BPB-203ENST00000558867 SP8Q8IXZ3 490 aa20.99■□□□□ 0.95
CDC42BPB-203ENST00000558867 MPNDQ8N594 471 aa20.99■□□□□ 0.95
CDC42BPB-203ENST00000558867 RTFDC1Q9BY42 306 aaPredicted RBP20.99■□□□□ 0.95
CDC42BPB-203ENST00000558867 TSPYL4Q9UJ04 414 aa20.99■□□□□ 0.95
CDC42BPB-203ENST00000558867 THSD7BQ9C0I4 1608 aa20.98■□□□□ 0.95
CDC42BPB-203ENST00000558867 MLLT1Q03111 559 aaPredicted RBP20.98■□□□□ 0.95
CDC42BPB-203ENST00000558867 DDX46Q7L014 1031 aaKnown RBP20.98■□□□□ 0.95
CDC42BPB-203ENST00000558867 ABCC4O15439 1325 aa20.98■□□□□ 0.95
CDC42BPB-203ENST00000558867 EIF2S2P20042 333 aaKnown RBP20.97■□□□□ 0.95
CDC42BPB-203ENST00000558867 GMPSP49915 693 aaPredicted RBP20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms