RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, human

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-215	ENST00000558787	ADGRG1	Q9Y653	693 aa		9.55	□□□□□ -0.88
MARK3-215	ENST00000558787	KIF7	Q2M1P5	1343 aa		9.55	□□□□□ -0.88
MARK3-215	ENST00000558787	IGSF1	Q8N6C5	1336 aa		9.55	□□□□□ -0.88
MARK3-215	ENST00000558787	QSER1	Q2KHR3	1735 aa		9.54	□□□□□ -0.88
MARK3-215	ENST00000558787	MAP3K5	Q99683	1374 aa		9.54	□□□□□ -0.88
MARK3-215	ENST00000558787	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	9.54	□□□□□ -0.88
MARK3-215	ENST00000558787	ATP6V1A	P38606	617 aa		9.54	□□□□□ -0.88
MARK3-215	ENST00000558787	ZNF784	Q8NCA9	323 aa	Predicted RBP	9.54	□□□□□ -0.88
MARK3-215	ENST00000558787	GOLGB1	Q14789	3259 aa	Known RBP	9.54	□□□□□ -0.88
MARK3-215	ENST00000558787	C5	P01031	1676 aa		9.54	□□□□□ -0.88
MARK3-215	ENST00000558787	YBX3	P16989	372 aa	Known RBP eCLIP	9.53	□□□□□ -0.88
MARK3-215	ENST00000558787	PLEKHO1	Q53GL0	409 aa	Predicted RBP	9.53	□□□□□ -0.88
MARK3-215	ENST00000558787	SULT6B1	Q6IMI4	303 aa		9.53	□□□□□ -0.88
MARK3-215	ENST00000558787	ZNF530	Q6P9A1	599 aa	Predicted RBP	9.53	□□□□□ -0.88
MARK3-215	ENST00000558787	SLC4A9	Q96Q91	983 aa		9.53	□□□□□ -0.88
MARK3-215	ENST00000558787	WWC3	Q9ULE0	1092 aa		9.53	□□□□□ -0.88
MARK3-215	ENST00000558787	GNPAT	O15228	680 aa		9.52	□□□□□ -0.89
MARK3-215	ENST00000558787	C4B	P0C0L5	1744 aa		9.52	□□□□□ -0.89
MARK3-215	ENST00000558787	IL13	P35225	146 aa		9.52	□□□□□ -0.89
MARK3-215	ENST00000558787	COPS2	P61201	443 aa		9.52	□□□□□ -0.89
MARK3-215	ENST00000558787	COL24A1	Q17RW2	1714 aa		9.52	□□□□□ -0.89
MARK3-215	ENST00000558787	CC2D1B	Q5T0F9	858 aa	Known RBP	9.52	□□□□□ -0.89
MARK3-215	ENST00000558787	PPP1R18	Q6NYC8	613 aa		9.52	□□□□□ -0.89
MARK3-215	ENST00000558787	FLAD1	Q8NFF5	587 aa		9.52	□□□□□ -0.89
MARK3-215	ENST00000558787	TAF1L	Q8IZX4	1826 aa		9.52	□□□□□ -0.89
MARK3-215	ENST00000558787	RCCD1	A6NED2	376 aa		9.51	□□□□□ -0.89
MARK3-215	ENST00000558787	ERVV-2	B6SEH9	535 aa		9.51	□□□□□ -0.89
MARK3-215	ENST00000558787	GGCX	P38435	758 aa		9.51	□□□□□ -0.89
MARK3-215	ENST00000558787	MTHFS	P49914	203 aa		9.51	□□□□□ -0.89
MARK3-215	ENST00000558787	CABP4	P57796	275 aa		9.51	□□□□□ -0.89
MARK3-215	ENST00000558787	DCAF5	Q96JK2	942 aa		9.51	□□□□□ -0.89
MARK3-215	ENST00000558787	TMEM134	Q9H6X4	195 aa		9.51	□□□□□ -0.89
MARK3-215	ENST00000558787	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	9.51	□□□□□ -0.89
MARK3-215	ENST00000558787	KDM6A	O15550	1401 aa	Predicted RBP	9.5	□□□□□ -0.89
MARK3-215	ENST00000558787	PER1	O15534	1290 aa	Predicted RBP	9.5	□□□□□ -0.89
MARK3-215	ENST00000558787	PTCD1	O75127	700 aa	Known RBP	9.5	□□□□□ -0.89
MARK3-215	ENST00000558787	OAT	P04181	439 aa		9.5	□□□□□ -0.89
MARK3-215	ENST00000558787	HMOX1	P09601	288 aa		9.5	□□□□□ -0.89
MARK3-215	ENST00000558787	FAM161A	Q3B820	660 aa		9.5	□□□□□ -0.89
MARK3-215	ENST00000558787	NFATC2IP	Q8NCF5	419 aa		9.5	□□□□□ -0.89
MARK3-215	ENST00000558787	PCDHB3	Q9Y5E6	796 aa		9.5	□□□□□ -0.89
MARK3-215	ENST00000558787	TESPA1	A2RU30	521 aa	Predicted RBP	9.49	□□□□□ -0.89
MARK3-215	ENST00000558787	HSP90AB1	P08238	724 aa	Known RBP	9.49	□□□□□ -0.89
MARK3-215	ENST00000558787	SSFA2	P28290	1259 aa		9.49	□□□□□ -0.89
MARK3-215	ENST00000558787	AMOT	Q4VCS5	1084 aa		9.49	□□□□□ -0.89
MARK3-215	ENST00000558787	C1orf141	Q5JVX7	400 aa		9.49	□□□□□ -0.89
MARK3-215	ENST00000558787	PRKD2	Q9BZL6	878 aa		9.49	□□□□□ -0.89
MARK3-215	ENST00000558787	LGR6	Q9HBX8	967 aa		9.49	□□□□□ -0.89
MARK3-215	ENST00000558787	ZPR1	O75312	459 aa		9.48	□□□□□ -0.89
MARK3-215	ENST00000558787	HMGB2	P26583	209 aa	Known RBP	9.48	□□□□□ -0.89
MARK3-215	ENST00000558787	HIC1	Q14526	733 aa		9.48	□□□□□ -0.89
MARK3-215	ENST00000558787	KMT5B	Q4FZB7	885 aa		9.48	□□□□□ -0.89
MARK3-215	ENST00000558787	NKX2-3	Q8TAU0	364 aa		9.48	□□□□□ -0.89
MARK3-215	ENST00000558787	CD2AP	Q9Y5K6	639 aa		9.48	□□□□□ -0.89
MARK3-215	ENST00000558787	UBR3	Q6ZT12	1888 aa		9.48	□□□□□ -0.89
MARK3-215	ENST00000558787	KDR	P35968	1356 aa		9.48	□□□□□ -0.89
MARK3-215	ENST00000558787	MMP10	P09238	476 aa		9.47	□□□□□ -0.89
MARK3-215	ENST00000558787	LAPTM4A	Q15012	233 aa		9.47	□□□□□ -0.89
MARK3-215	ENST00000558787	TRAPPC3L	Q5T215	181 aa		9.47	□□□□□ -0.89
MARK3-215	ENST00000558787	VSIG10	Q8N0Z9	540 aa		9.47	□□□□□ -0.89
MARK3-215	ENST00000558787	RTCB	Q9Y3I0	505 aa	Known RBP	9.47	□□□□□ -0.89
MARK3-215	ENST00000558787	GRIN3B	O60391	1043 aa		9.46	□□□□□ -0.9
MARK3-215	ENST00000558787	SLC39A6	Q13433	755 aa		9.46	□□□□□ -0.9
MARK3-215	ENST00000558787	RBM26	Q5T8P6	1007 aa	Known RBP	9.46	□□□□□ -0.9
MARK3-215	ENST00000558787		Q6ZNB5	142 aa		9.46	□□□□□ -0.9
MARK3-215	ENST00000558787		V9GY48	417 aa	Predicted RBP	9.46	□□□□□ -0.9
MARK3-215	ENST00000558787	CHD4	Q14839	1912 aa		9.46	□□□□□ -0.9
MARK3-215	ENST00000558787	DIAPH1	O60610	1272 aa	Known RBP	9.45	□□□□□ -0.9
MARK3-215	ENST00000558787	RPS6KA4	O75676	772 aa		9.45	□□□□□ -0.9
MARK3-215	ENST00000558787	RFC4	P35249	363 aa		9.45	□□□□□ -0.9
MARK3-215	ENST00000558787	ZEB1	P37275	1124 aa	Predicted RBP	9.45	□□□□□ -0.9
MARK3-215	ENST00000558787	CRKL	P46109	303 aa	Known RBP	9.45	□□□□□ -0.9
MARK3-215	ENST00000558787	MTHFSD	Q2M296	383 aa	Known RBP	9.45	□□□□□ -0.9
MARK3-215	ENST00000558787	AKAP4	Q5JQC9	854 aa		9.45	□□□□□ -0.9
MARK3-215	ENST00000558787	RC3H1	Q5TC82	1133 aa	Known RBP	9.45	□□□□□ -0.9
MARK3-215	ENST00000558787	TMUB1	Q9BVT8	246 aa		9.45	□□□□□ -0.9
MARK3-215	ENST00000558787	SRP68	Q9UHB9	627 aa	Known RBP	9.45	□□□□□ -0.9
MARK3-215	ENST00000558787	PLEKHG2	Q9H7P9	1386 aa		9.45	□□□□□ -0.9
MARK3-215	ENST00000558787		A0A0G2JLW4	131 aa		9.44	□□□□□ -0.9
MARK3-215	ENST00000558787	U2SURP	O15042	1029 aa	Known RBP	9.44	□□□□□ -0.9
MARK3-215	ENST00000558787	RNMT	O43148	476 aa	Known RBP	9.44	□□□□□ -0.9
MARK3-215	ENST00000558787	ACTN4	O43707	911 aa	Known RBP	9.44	□□□□□ -0.9
MARK3-215	ENST00000558787	GYS1	P13807	737 aa		9.44	□□□□□ -0.9
MARK3-215	ENST00000558787	INTS5	Q6P9B9	1019 aa	Known RBP	9.44	□□□□□ -0.9
MARK3-215	ENST00000558787	BLOC1S3	Q6QNY0	202 aa		9.44	□□□□□ -0.9
MARK3-215	ENST00000558787	DNAJC10	Q8IXB1	793 aa		9.44	□□□□□ -0.9
MARK3-215	ENST00000558787	PXYLP1	Q8TE99	480 aa		9.44	□□□□□ -0.9
MARK3-215	ENST00000558787	SLC52A2	Q9HAB3	445 aa		9.44	□□□□□ -0.9
MARK3-215	ENST00000558787	CNTNAP4	Q9C0A0	1308 aa		9.44	□□□□□ -0.9
MARK3-215	ENST00000558787	GFRA3	O60609	400 aa		9.43	□□□□□ -0.9
MARK3-215	ENST00000558787	CFH	P08603	1231 aa		9.43	□□□□□ -0.9
MARK3-215	ENST00000558787	C1QTNF8	P60827	252 aa		9.43	□□□□□ -0.9
MARK3-215	ENST00000558787	NLGN1	Q8N2Q7	840 aa		9.43	□□□□□ -0.9
MARK3-215	ENST00000558787	MYH14	Q7Z406	1995 aa	Known RBP	9.43	□□□□□ -0.9
MARK3-215	ENST00000558787	ZNF526	Q8TF50	670 aa	Predicted RBP	9.42	□□□□□ -0.9
MARK3-215	ENST00000558787	SLC10A3	P09131	477 aa		9.41	□□□□□ -0.9
MARK3-215	ENST00000558787	DPEP1	P16444	411 aa		9.41	□□□□□ -0.9
MARK3-215	ENST00000558787	DDR1	Q08345	913 aa		9.41	□□□□□ -0.9
MARK3-215	ENST00000558787	PARP3	Q9Y6F1	533 aa		9.41	□□□□□ -0.9
MARK3-215	ENST00000558787	COL5A3	P25940	1745 aa	Predicted RBP	9.41	□□□□□ -0.9

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