RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 PCDHB8Q9UN66 801 aa10.61□□□□□ -0.71
TRAF3-205ENST00000558700 PCDHB13Q9Y5F0 798 aa10.61□□□□□ -0.71
TRAF3-205ENST00000558700 ANKRD36CQ5JPF3 1778 aa10.6□□□□□ -0.71
TRAF3-205ENST00000558700 SOGA3Q5TF21 947 aa10.6□□□□□ -0.71
TRAF3-205ENST00000558700 STYK1Q6J9G0 422 aa10.6□□□□□ -0.71
TRAF3-205ENST00000558700 CCDC24Q8N4L8 307 aa10.6□□□□□ -0.71
TRAF3-205ENST00000558700 RBM46Q8TBY0 533 aaKnown RBP10.6□□□□□ -0.71
TRAF3-205ENST00000558700 CNKSR1Q969H4 720 aa10.6□□□□□ -0.71
TRAF3-205ENST00000558700 THUMPD2Q9BTF0 503 aaKnown RBP10.6□□□□□ -0.71
TRAF3-205ENST00000558700 MIS18AQ9NYP9 233 aa10.6□□□□□ -0.71
TRAF3-205ENST00000558700 IBTKQ9P2D0 1353 aaPredicted RBP10.6□□□□□ -0.71
TRAF3-205ENST00000558700 ERBB4Q15303 1308 aa10.59□□□□□ -0.71
TRAF3-205ENST00000558700 LTBP3Q9NS15 1303 aa10.59□□□□□ -0.71
TRAF3-205ENST00000558700 NFKBIEO00221 500 aa10.59□□□□□ -0.71
TRAF3-205ENST00000558700 SRGNP10124 158 aa10.59□□□□□ -0.71
TRAF3-205ENST00000558700 EIF4A1P60842 406 aaKnown RBP10.59□□□□□ -0.71
TRAF3-205ENST00000558700 PRPF40BQ6NWY9 871 aaKnown RBP10.59□□□□□ -0.71
TRAF3-205ENST00000558700 KIF6Q6ZMV9 814 aa10.59□□□□□ -0.71
TRAF3-205ENST00000558700 ZNF579Q8NAF0 562 aaKnown RBP10.59□□□□□ -0.71
TRAF3-205ENST00000558700 MASTLQ96GX5 879 aa10.59□□□□□ -0.71
TRAF3-205ENST00000558700 NIP7Q9Y221 180 aaKnown RBP eCLIP10.59□□□□□ -0.71
TRAF3-205ENST00000558700 RIC1Q4ADV7 1423 aa10.58□□□□□ -0.72
TRAF3-205ENST00000558700 C21orf2O43822 256 aa10.58□□□□□ -0.72
TRAF3-205ENST00000558700 APLP1P51693 650 aa10.58□□□□□ -0.72
TRAF3-205ENST00000558700 DDX10Q13206 875 aaKnown RBP10.58□□□□□ -0.72
TRAF3-205ENST00000558700 WDR43Q15061 677 aaKnown RBP eCLIP10.58□□□□□ -0.72
TRAF3-205ENST00000558700 TPTE2Q6XPS3 522 aa10.58□□□□□ -0.72
TRAF3-205ENST00000558700 MFRPQ9BY79 579 aa10.58□□□□□ -0.72
TRAF3-205ENST00000558700 TAOK3Q9H2K8 898 aa10.58□□□□□ -0.72
TRAF3-205ENST00000558700 TSPYL4Q9UJ04 414 aa10.58□□□□□ -0.72
TRAF3-205ENST00000558700 MAP3K15Q6ZN16 1313 aa10.58□□□□□ -0.72
TRAF3-205ENST00000558700 GLTPD2A6NH11 291 aa10.57□□□□□ -0.72
TRAF3-205ENST00000558700 ERVV-1B6SEH8 477 aa10.57□□□□□ -0.72
TRAF3-205ENST00000558700 NPR1P16066 1061 aa10.57□□□□□ -0.72
TRAF3-205ENST00000558700 RIPK4P57078 832 aa10.57□□□□□ -0.72
TRAF3-205ENST00000558700 FSTL1Q12841 308 aa10.57□□□□□ -0.72
TRAF3-205ENST00000558700 E2F4Q16254 413 aa10.57□□□□□ -0.72
TRAF3-205ENST00000558700 NYXQ9GZU5 481 aa10.57□□□□□ -0.72
TRAF3-205ENST00000558700 BABAM1Q9NWV8 329 aa10.57□□□□□ -0.72
TRAF3-205ENST00000558700 ABCC12Q96J65 1359 aa10.56□□□□□ -0.72
TRAF3-205ENST00000558700 GTF2E1P29083 439 aaPredicted RBP10.56□□□□□ -0.72
TRAF3-205ENST00000558700 TMPOP42166 694 aaKnown RBP10.56□□□□□ -0.72
TRAF3-205ENST00000558700 PRELPP51888 382 aa10.56□□□□□ -0.72
TRAF3-205ENST00000558700 CCDC93Q567U6 631 aa10.56□□□□□ -0.72
TRAF3-205ENST00000558700 CHADLQ6NUI6 762 aa10.56□□□□□ -0.72
TRAF3-205ENST00000558700 FARP1Q9Y4F1 1045 aaPredicted RBP10.56□□□□□ -0.72
TRAF3-205ENST00000558700 CEP350Q5VT06 3117 aa10.56□□□□□ -0.72
TRAF3-205ENST00000558700 KLRG2A4D1S0 409 aaPredicted RBP10.55□□□□□ -0.72
TRAF3-205ENST00000558700 FAM177BA6PVY3 158 aa10.55□□□□□ -0.72
TRAF3-205ENST00000558700 MYL6BP14649 208 aa10.55□□□□□ -0.72
TRAF3-205ENST00000558700 HLFQ16534 295 aa10.55□□□□□ -0.72
TRAF3-205ENST00000558700 ERFEQ4G0M1 354 aa10.55□□□□□ -0.72
TRAF3-205ENST00000558700 NGEFQ8N5V2 710 aa10.55□□□□□ -0.72
TRAF3-205ENST00000558700 SMC1BQ8NDV3 1235 aa10.55□□□□□ -0.72
TRAF3-205ENST00000558700 RRAGCQ9HB90 399 aa10.55□□□□□ -0.72
TRAF3-205ENST00000558700 RRP7AQ9Y3A4 280 aaKnown RBP10.55□□□□□ -0.72
TRAF3-205ENST00000558700 VEGFAP15692 232 aaPredicted RBP10.54□□□□□ -0.72
TRAF3-205ENST00000558700 DPY19L2Q6NUT2 758 aa10.54□□□□□ -0.72
TRAF3-205ENST00000558700 TTLL7Q6ZT98 887 aa10.54□□□□□ -0.72
TRAF3-205ENST00000558700 RUNDC1Q96C34 613 aa10.54□□□□□ -0.72
TRAF3-205ENST00000558700 ZBTB3Q9H5J0 574 aa10.54□□□□□ -0.72
TRAF3-205ENST00000558700 SCN4AP35499 1836 aa10.54□□□□□ -0.72
TRAF3-205ENST00000558700 LAMB2P55268 1798 aa10.53□□□□□ -0.72
TRAF3-205ENST00000558700 ALDH1B1P30837 517 aa10.53□□□□□ -0.72
TRAF3-205ENST00000558700 FKBP4Q02790 459 aaKnown RBP eCLIP10.53□□□□□ -0.72
TRAF3-205ENST00000558700 PARP10Q53GL7 1025 aa10.53□□□□□ -0.72
TRAF3-205ENST00000558700 CCDC146Q8IYE0 955 aa10.53□□□□□ -0.72
TRAF3-205ENST00000558700 RNF123Q5XPI4 1314 aa10.53□□□□□ -0.72
TRAF3-205ENST00000558700 UBN2Q6ZU65 1347 aa10.53□□□□□ -0.72
TRAF3-205ENST00000558700 EIF2S2P20042 333 aaKnown RBP10.52□□□□□ -0.73
TRAF3-205ENST00000558700 GPTP24298 496 aa10.52□□□□□ -0.73
TRAF3-205ENST00000558700 NEUROD2Q15784 382 aa10.52□□□□□ -0.73
TRAF3-205ENST00000558700 CRY2Q49AN0 593 aa10.52□□□□□ -0.73
TRAF3-205ENST00000558700 GIGYF2Q6Y7W6 1299 aaKnown RBP10.52□□□□□ -0.73
TRAF3-205ENST00000558700 NUTM1Q86Y26 1132 aa10.52□□□□□ -0.73
TRAF3-205ENST00000558700 RPGRQ92834 1020 aaKnown RBP10.52□□□□□ -0.73
TRAF3-205ENST00000558700 PRKRIP1Q9H875 184 aaPredicted RBP10.52□□□□□ -0.73
TRAF3-205ENST00000558700 NTSR2O95665 410 aa10.51□□□□□ -0.73
TRAF3-205ENST00000558700 HSP90AB3PQ58FF7 597 aa10.51□□□□□ -0.73
TRAF3-205ENST00000558700 SMYD5Q6GMV2 418 aa10.51□□□□□ -0.73
TRAF3-205ENST00000558700 PPP1R42Q7Z4L9 355 aa10.51□□□□□ -0.73
TRAF3-205ENST00000558700 RTKN2Q8IZC4 609 aa10.51□□□□□ -0.73
TRAF3-205ENST00000558700 ZC3H15Q8WU90 426 aaKnown RBP10.51□□□□□ -0.73
TRAF3-205ENST00000558700 C7orf43Q8WVR3 580 aa10.51□□□□□ -0.73
TRAF3-205ENST00000558700 SNED1Q8TER0 1413 aa10.5□□□□□ -0.73
TRAF3-205ENST00000558700 HOXB7P09629 217 aa10.5□□□□□ -0.73
TRAF3-205ENST00000558700 BRPF1P55201 1214 aaPredicted RBP10.5□□□□□ -0.73
TRAF3-205ENST00000558700 PDIA6Q15084 440 aa10.5□□□□□ -0.73
TRAF3-205ENST00000558700 CC2D2BQ6DHV5 1058 aa10.5□□□□□ -0.73
TRAF3-205ENST00000558700 LRP10Q7Z4F1 713 aa10.5□□□□□ -0.73
TRAF3-205ENST00000558700 ZNF34Q8IZ26 560 aa10.5□□□□□ -0.73
TRAF3-205ENST00000558700 IQCA1LA6NCM1 817 aa10.49□□□□□ -0.73
TRAF3-205ENST00000558700 CHL1O00533 1208 aa10.49□□□□□ -0.73
TRAF3-205ENST00000558700 PROSER3Q2NL68 480 aa10.49□□□□□ -0.73
TRAF3-205ENST00000558700 SUSD4Q5VX71 490 aa10.49□□□□□ -0.73
TRAF3-205ENST00000558700 NECTIN2Q92692 538 aa10.49□□□□□ -0.73
TRAF3-205ENST00000558700 ZNF277Q9NRM2 450 aaPredicted RBP10.49□□□□□ -0.73
TRAF3-205ENST00000558700 ADAMTS8Q9UP79 889 aa10.49□□□□□ -0.73
TRAF3-205ENST00000558700 TRIM35Q9UPQ4 493 aa10.49□□□□□ -0.73
TRAF3-205ENST00000558700 LAS1LQ9Y4W2 734 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms