RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 CASP8AP2Q9UKL3 1982 aa20.1■□□□□ 0.81
LINC01220-201ENST00000558575 TAF1DQ9H5J8 278 aaPredicted RBP20.09■□□□□ 0.81
LINC01220-201ENST00000558575 LTBP1Q14766 1721 aa20.09■□□□□ 0.81
LINC01220-201ENST00000558575 RASSF10A6NK89 507 aa20.08■□□□□ 0.81
LINC01220-201ENST00000558575 GOLGA2Q08379 1002 aa20.08■□□□□ 0.81
LINC01220-201ENST00000558575 SLFN5Q08AF3 891 aa20.08■□□□□ 0.81
LINC01220-201ENST00000558575 LRP10Q7Z4F1 713 aa20.08■□□□□ 0.81
LINC01220-201ENST00000558575 NECTIN2Q92692 538 aa20.08■□□□□ 0.81
LINC01220-201ENST00000558575 ZNF622Q969S3 477 aaKnown RBP eCLIP20.08■□□□□ 0.81
LINC01220-201ENST00000558575 HOXB7P09629 217 aa20.07■□□□□ 0.8
LINC01220-201ENST00000558575 HNRNPUQ00839 825 aaKnown RBP eCLIP20.07■□□□□ 0.8
LINC01220-201ENST00000558575 PROSER3Q2NL68 480 aa20.07■□□□□ 0.8
LINC01220-201ENST00000558575 L3MBTL3Q96JM7 780 aaPredicted RBP20.07■□□□□ 0.8
LINC01220-201ENST00000558575 TAOK3Q9H2K8 898 aa20.07■□□□□ 0.8
LINC01220-201ENST00000558575 EXOSC9Q06265 439 aaKnown RBP20.06■□□□□ 0.8
LINC01220-201ENST00000558575 TRMT2AQ8IZ69 625 aaKnown RBP20.06■□□□□ 0.8
LINC01220-201ENST00000558575 WDR33Q9C0J8 1336 aaKnown RBP20.05■□□□□ 0.8
LINC01220-201ENST00000558575 IQCA1LA6NCM1 817 aa20.05■□□□□ 0.8
LINC01220-201ENST00000558575 ANXA1P04083 346 aa20.05■□□□□ 0.8
LINC01220-201ENST00000558575 BICDL1Q6ZP65 573 aa20.05■□□□□ 0.8
LINC01220-201ENST00000558575 CCDC24Q8N4L8 307 aa20.05■□□□□ 0.8
LINC01220-201ENST00000558575 TBC1D2BQ9UPU7 963 aa20.05■□□□□ 0.8
LINC01220-201ENST00000558575 BCORQ6W2J9 1755 aa20.04■□□□□ 0.8
LINC01220-201ENST00000558575 DEFB115Q30KQ5 88 aa20.04■□□□□ 0.8
LINC01220-201ENST00000558575 MYH16Q9H6N6 1097 aa20.04■□□□□ 0.8
LINC01220-201ENST00000558575 ZNF330Q9Y3S2 320 aaPredicted RBP20.04■□□□□ 0.8
LINC01220-201ENST00000558575 ERBB4Q15303 1308 aa20.03■□□□□ 0.8
LINC01220-201ENST00000558575 E9PSI1 815 aa20.03■□□□□ 0.8
LINC01220-201ENST00000558575 VAMP4O75379 141 aa20.03■□□□□ 0.8
LINC01220-201ENST00000558575 MYL6BP14649 208 aa20.03■□□□□ 0.8
LINC01220-201ENST00000558575 MAP2K1Q02750 393 aaPredicted RBP20.03■□□□□ 0.8
LINC01220-201ENST00000558575 EAPPQ56P03 285 aaPredicted RBP20.03■□□□□ 0.8
LINC01220-201ENST00000558575 HDGFL1Q5TGJ6 251 aa20.03■□□□□ 0.8
LINC01220-201ENST00000558575 A0A087WZG4 1122 aa20.02■□□□□ 0.8
LINC01220-201ENST00000558575 CAMTA2O94983 1202 aa20.02■□□□□ 0.8
LINC01220-201ENST00000558575 TWISTNBQ3B726 338 aaPredicted RBP20.02■□□□□ 0.8
LINC01220-201ENST00000558575 TTLL7Q6ZT98 887 aa20.02■□□□□ 0.8
LINC01220-201ENST00000558575 DDX21Q9NR30 783 aaKnown RBP eCLIP20.02■□□□□ 0.8
LINC01220-201ENST00000558575 CHPF2Q9P2E5 772 aa20.02■□□□□ 0.8
LINC01220-201ENST00000558575 ZNF541Q9H0D2 1346 aa20.02■□□□□ 0.79
LINC01220-201ENST00000558575 PRR5LQ6MZQ0 368 aa20.01■□□□□ 0.79
LINC01220-201ENST00000558575 DZIP3Q86Y13 1208 aaKnown RBP20.01■□□□□ 0.79
LINC01220-201ENST00000558575 BRIP1Q9BX63 1249 aa20.01■□□□□ 0.79
LINC01220-201ENST00000558575 PDE6BP35913 854 aa20■□□□□ 0.79
LINC01220-201ENST00000558575 TBC1D9BQ66K14 1250 aa20■□□□□ 0.79
LINC01220-201ENST00000558575 MAP1SQ66K74 1059 aaPredicted RBP20■□□□□ 0.79
LINC01220-201ENST00000558575 LAMB4A4D0S4 1761 aa20■□□□□ 0.79
LINC01220-201ENST00000558575 TCERG1O14776 1098 aaKnown RBP19.99■□□□□ 0.79
LINC01220-201ENST00000558575 PRPF40BQ6NWY9 871 aaKnown RBP19.99■□□□□ 0.79
LINC01220-201ENST00000558575 CLEC11AQ9Y240 323 aa19.99■□□□□ 0.79
LINC01220-201ENST00000558575 CNTROBQ8N137 903 aa19.98■□□□□ 0.79
LINC01220-201ENST00000558575 DBF4Q9UBU7 674 aaPredicted RBP19.98■□□□□ 0.79
LINC01220-201ENST00000558575 PDZRN3Q9UPQ7 1066 aa19.98■□□□□ 0.79
LINC01220-201ENST00000558575 EPHX2P34913 555 aa19.97■□□□□ 0.79
LINC01220-201ENST00000558575 HLFQ16534 295 aa19.97■□□□□ 0.79
LINC01220-201ENST00000558575 CCDC30Q5VVM6 783 aa19.97■□□□□ 0.79
LINC01220-201ENST00000558575 COPS6Q7L5N1 327 aa19.97■□□□□ 0.79
LINC01220-201ENST00000558575 XAGE3Q8WTP9 111 aa19.97■□□□□ 0.79
LINC01220-201ENST00000558575 HACL1Q9UJ83 578 aa19.97■□□□□ 0.79
LINC01220-201ENST00000558575 TSKSQ9UJT2 592 aa19.97■□□□□ 0.79
LINC01220-201ENST00000558575 ABT1Q9ULW3 272 aaKnown RBP19.97■□□□□ 0.79
LINC01220-201ENST00000558575 NPM2Q86SE8 214 aaKnown RBP19.96■□□□□ 0.79
LINC01220-201ENST00000558575 RNF123Q5XPI4 1314 aa19.96■□□□□ 0.79
LINC01220-201ENST00000558575 ZBED9Q6R2W3 1325 aa19.96■□□□□ 0.79
LINC01220-201ENST00000558575 FMR1Q06787 632 aaKnown RBP eCLIP19.95■□□□□ 0.78
LINC01220-201ENST00000558575 AIMP1Q12904 312 aaKnown RBP19.95■□□□□ 0.78
LINC01220-201ENST00000558575 STYK1Q6J9G0 422 aa19.95■□□□□ 0.78
LINC01220-201ENST00000558575 CNKSR1Q969H4 720 aa19.95■□□□□ 0.78
LINC01220-201ENST00000558575 PHAXQ9H814 394 aaKnown RBP19.95■□□□□ 0.78
LINC01220-201ENST00000558575 HYPKQ9NX55 129 aa19.95■□□□□ 0.78
LINC01220-201ENST00000558575 ERVV-1B6SEH8 477 aa19.94■□□□□ 0.78
LINC01220-201ENST00000558575 SRGNP10124 158 aa19.94■□□□□ 0.78
LINC01220-201ENST00000558575 C7orf43Q8WVR3 580 aa19.94■□□□□ 0.78
LINC01220-201ENST00000558575 CAPNS2Q96L46 248 aa19.94■□□□□ 0.78
LINC01220-201ENST00000558575 MAP3K15Q6ZN16 1313 aa19.94■□□□□ 0.78
LINC01220-201ENST00000558575 CYP4F22Q6NT55 531 aa19.93■□□□□ 0.78
LINC01220-201ENST00000558575 CLEC4GQ6UXB4 293 aa19.93■□□□□ 0.78
LINC01220-201ENST00000558575 G2E3Q7L622 706 aa19.93■□□□□ 0.78
LINC01220-201ENST00000558575 MCOLN1Q9GZU1 580 aa19.93■□□□□ 0.78
LINC01220-201ENST00000558575 ZBTB3Q9H5J0 574 aa19.93■□□□□ 0.78
LINC01220-201ENST00000558575 RGL2O15211 777 aa19.92■□□□□ 0.78
LINC01220-201ENST00000558575 SLC4A2P04920 1241 aa19.92■□□□□ 0.78
LINC01220-201ENST00000558575 SOGA3Q5TF21 947 aa19.92■□□□□ 0.78
LINC01220-201ENST00000558575 CHMP4AQ9BY43 222 aa19.92■□□□□ 0.78
LINC01220-201ENST00000558575 ZNF277Q9NRM2 450 aaPredicted RBP19.92■□□□□ 0.78
LINC01220-201ENST00000558575 COL4A5P29400 1685 aa19.91■□□□□ 0.78
LINC01220-201ENST00000558575 GRM1Q13255 1194 aa19.91■□□□□ 0.78
LINC01220-201ENST00000558575 PNMA8AQ86V59 439 aaPredicted RBP19.91■□□□□ 0.78
LINC01220-201ENST00000558575 CCDC93Q567U6 631 aa19.9■□□□□ 0.78
LINC01220-201ENST00000558575 OLFM4Q6UX06 510 aa19.9■□□□□ 0.78
LINC01220-201ENST00000558575 KIF6Q6ZMV9 814 aa19.9■□□□□ 0.78
LINC01220-201ENST00000558575 ANKRD13DQ6ZTN6 518 aa19.9■□□□□ 0.78
LINC01220-201ENST00000558575 PAXIP1Q6ZW49 1069 aaPredicted RBP19.9■□□□□ 0.78
LINC01220-201ENST00000558575 CNBD1Q8NA66 436 aa19.9■□□□□ 0.78
LINC01220-201ENST00000558575 MASTLQ96GX5 879 aa19.9■□□□□ 0.78
LINC01220-201ENST00000558575 GPR101Q96P66 508 aaPredicted RBP19.9■□□□□ 0.78
LINC01220-201ENST00000558575 BEGAINQ9BUH8 593 aa19.9■□□□□ 0.78
LINC01220-201ENST00000558575 FKBP4Q02790 459 aaKnown RBP eCLIP19.89■□□□□ 0.77
LINC01220-201ENST00000558575 GIGYF2Q6Y7W6 1299 aaKnown RBP19.89■□□□□ 0.77
LINC01220-201ENST00000558575 STK31Q9BXU1 1019 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms