RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 ITGBL1O95965 494 aaPredicted RBP21.79■■□□□ 1.08
NEK9-211ENST00000557673 OLFM4Q6UX06 510 aa21.79■■□□□ 1.08
NEK9-211ENST00000557673 NGEFQ8N5V2 710 aa21.79■■□□□ 1.08
NEK9-211ENST00000557673 AIDAQ96BJ3 306 aa21.79■■□□□ 1.08
NEK9-211ENST00000557673 MAP3K15Q6ZN16 1313 aa21.79■■□□□ 1.08
NEK9-211ENST00000557673 RPGRQ92834 1020 aaKnown RBP21.78■■□□□ 1.08
NEK9-211ENST00000557673 CCDC146Q8IYE0 955 aa21.77■■□□□ 1.08
NEK9-211ENST00000557673 ADAMTS8Q9UP79 889 aa21.77■■□□□ 1.08
NEK9-211ENST00000557673 HOXA10P31260 410 aaPredicted RBP21.76■■□□□ 1.07
NEK9-211ENST00000557673 EIF6P56537 245 aaKnown RBP21.76■■□□□ 1.07
NEK9-211ENST00000557673 NUTM1Q86Y26 1132 aa21.76■■□□□ 1.07
NEK9-211ENST00000557673 PRDM10Q9NQV6 1147 aa21.76■■□□□ 1.07
NEK9-211ENST00000557673 RRP7AQ9Y3A4 280 aaKnown RBP21.76■■□□□ 1.07
NEK9-211ENST00000557673 LAMB4A4D0S4 1761 aa21.76■■□□□ 1.07
NEK9-211ENST00000557673 RNF123Q5XPI4 1314 aa21.76■■□□□ 1.07
NEK9-211ENST00000557673 CTCFP49711 727 aaPredicted RBP21.75■■□□□ 1.07
NEK9-211ENST00000557673 VEGFBP49765 207 aa21.75■■□□□ 1.07
NEK9-211ENST00000557673 RIPK4P57078 832 aa21.75■■□□□ 1.07
NEK9-211ENST00000557673 EIF4A1P60842 406 aaKnown RBP21.75■■□□□ 1.07
NEK9-211ENST00000557673 CNTROBQ8N137 903 aa21.75■■□□□ 1.07
NEK9-211ENST00000557673 IBTKQ9P2D0 1353 aaPredicted RBP21.74■■□□□ 1.07
NEK9-211ENST00000557673 LMOD1P29536 600 aaPredicted RBP21.74■■□□□ 1.07
NEK9-211ENST00000557673 TMPOP42166 694 aaKnown RBP21.74■■□□□ 1.07
NEK9-211ENST00000557673 RBM17Q96I25 401 aaKnown RBP21.74■■□□□ 1.07
NEK9-211ENST00000557673 TMX4Q9H1E5 349 aaPredicted RBP21.74■■□□□ 1.07
NEK9-211ENST00000557673 RIC1Q4ADV7 1423 aa21.73■■□□□ 1.07
NEK9-211ENST00000557673 FOXN1O15353 648 aa21.73■■□□□ 1.07
NEK9-211ENST00000557673 MYL6BP14649 208 aa21.73■■□□□ 1.07
NEK9-211ENST00000557673 ERBB4Q15303 1308 aa21.73■■□□□ 1.07
NEK9-211ENST00000557673 ABCC12Q96J65 1359 aa21.73■■□□□ 1.07
NEK9-211ENST00000557673 CCER2I3L3R5 266 aa21.72■■□□□ 1.07
NEK9-211ENST00000557673 DEFB115Q30KQ5 88 aa21.72■■□□□ 1.07
NEK9-211ENST00000557673 MAP1SQ66K74 1059 aaPredicted RBP21.72■■□□□ 1.07
NEK9-211ENST00000557673 TTLL7Q6ZT98 887 aa21.72■■□□□ 1.07
NEK9-211ENST00000557673 PPP1R42Q7Z4L9 355 aa21.72■■□□□ 1.07
NEK9-211ENST00000557673 CRAMP1Q96RY5 1269 aa21.72■■□□□ 1.07
NEK9-211ENST00000557673 RASSF10A6NK89 507 aa21.71■■□□□ 1.07
NEK9-211ENST00000557673 GPTP24298 496 aa21.71■■□□□ 1.07
NEK9-211ENST00000557673 LARGE2Q8N3Y3 721 aa21.71■■□□□ 1.07
NEK9-211ENST00000557673 RUNDC1Q96C34 613 aa21.71■■□□□ 1.07
NEK9-211ENST00000557673 ZBTB3Q9H5J0 574 aa21.71■■□□□ 1.07
NEK9-211ENST00000557673 GJA3Q9Y6H8 435 aa21.71■■□□□ 1.07
NEK9-211ENST00000557673 NEUROD2Q15784 382 aa21.7■■□□□ 1.06
NEK9-211ENST00000557673 PARP10Q53GL7 1025 aa21.7■■□□□ 1.06
NEK9-211ENST00000557673 SUSD4Q5VX71 490 aa21.7■■□□□ 1.06
NEK9-211ENST00000557673 GIGYF2Q6Y7W6 1299 aaKnown RBP21.7■■□□□ 1.06
NEK9-211ENST00000557673 ZNF34Q8IZ26 560 aa21.7■■□□□ 1.06
NEK9-211ENST00000557673 WBP1LQ9NX94 342 aa21.7■■□□□ 1.06
NEK9-211ENST00000557673 SNED1Q8TER0 1413 aa21.7■■□□□ 1.06
NEK9-211ENST00000557673 PPEF1O14829 653 aaPredicted RBP21.69■■□□□ 1.06
NEK9-211ENST00000557673 NLRP3Q96P20 1036 aa21.69■■□□□ 1.06
NEK9-211ENST00000557673 ABT1Q9ULW3 272 aaKnown RBP21.69■■□□□ 1.06
NEK9-211ENST00000557673 UBN2Q6ZU65 1347 aa21.69■■□□□ 1.06
NEK9-211ENST00000557673 MAP2K1Q02750 393 aaPredicted RBP21.68■■□□□ 1.06
NEK9-211ENST00000557673 LMOD3Q0VAK6 560 aa21.68■■□□□ 1.06
NEK9-211ENST00000557673 NIM1KQ8IY84 436 aa21.68■■□□□ 1.06
NEK9-211ENST00000557673 MIER1Q8N108 512 aa21.68■■□□□ 1.06
NEK9-211ENST00000557673 VPS33BQ9H267 617 aa21.68■■□□□ 1.06
NEK9-211ENST00000557673 TSPYL4Q9UJ04 414 aa21.68■■□□□ 1.06
NEK9-211ENST00000557673 ADAMTSL1Q8N6G6 1762 aa21.68■■□□□ 1.06
NEK9-211ENST00000557673 NUP98P52948 1817 aa21.68■■□□□ 1.06
NEK9-211ENST00000557673 NTSR2O95665 410 aa21.67■■□□□ 1.06
NEK9-211ENST00000557673 USP50Q70EL3 339 aaPredicted RBP21.67■■□□□ 1.06
NEK9-211ENST00000557673 DDX21Q9NR30 783 aaKnown RBP eCLIP21.67■■□□□ 1.06
NEK9-211ENST00000557673 WDR33Q9C0J8 1336 aaKnown RBP21.65■■□□□ 1.06
NEK9-211ENST00000557673 SUPT20HQ8NEM7 779 aa21.65■■□□□ 1.06
NEK9-211ENST00000557673 UTP14AQ9BVJ6 771 aaKnown RBP21.65■■□□□ 1.06
NEK9-211ENST00000557673 TCERG1O14776 1098 aaKnown RBP21.64■■□□□ 1.05
NEK9-211ENST00000557673 SCNN1DP51172 638 aa21.64■■□□□ 1.05
NEK9-211ENST00000557673 SLC10A5Q5PT55 438 aa21.64■■□□□ 1.05
NEK9-211ENST00000557673 BABAM1Q9NWV8 329 aa21.64■■□□□ 1.05
NEK9-211ENST00000557673 TRIM35Q9UPQ4 493 aa21.64■■□□□ 1.05
NEK9-211ENST00000557673 ATP6V0A2Q9Y487 856 aa21.64■■□□□ 1.05
NEK9-211ENST00000557673 PPIP5K2O43314 1243 aa21.63■■□□□ 1.05
NEK9-211ENST00000557673 EPS15P42566 896 aa21.63■■□□□ 1.05
NEK9-211ENST00000557673 ECE1P42892 770 aa21.63■■□□□ 1.05
NEK9-211ENST00000557673 LBX1P52954 281 aa21.63■■□□□ 1.05
NEK9-211ENST00000557673 BBOX1O75936 387 aa21.62■■□□□ 1.05
NEK9-211ENST00000557673 EIF2S2P20042 333 aaKnown RBP21.62■■□□□ 1.05
NEK9-211ENST00000557673 HSP90AB3PQ58FF7 597 aa21.62■■□□□ 1.05
NEK9-211ENST00000557673 FAM9BQ8IZU0 186 aa21.62■■□□□ 1.05
NEK9-211ENST00000557673 BEGAINQ9BUH8 593 aa21.61■■□□□ 1.05
NEK9-211ENST00000557673 ADARB2Q9NS39 739 aaKnown RBP21.61■■□□□ 1.05
NEK9-211ENST00000557673 ZNRF3Q9ULT6 936 aa21.61■■□□□ 1.05
NEK9-211ENST00000557673 APAF1O14727 1248 aa21.6■■□□□ 1.05
NEK9-211ENST00000557673 AOC3Q16853 763 aa21.6■■□□□ 1.05
NEK9-211ENST00000557673 C3orf67Q6ZVT6 689 aa21.6■■□□□ 1.05
NEK9-211ENST00000557673 COL4A5P29400 1685 aa21.6■■□□□ 1.05
NEK9-211ENST00000557673 PDIA6Q15084 440 aa21.59■■□□□ 1.05
NEK9-211ENST00000557673 PAXIP1Q6ZW49 1069 aaPredicted RBP21.59■■□□□ 1.05
NEK9-211ENST00000557673 RTFDC1Q9BY42 306 aaPredicted RBP21.59■■□□□ 1.05
NEK9-211ENST00000557673 GPRC5DQ9NZD1 345 aa21.59■■□□□ 1.05
NEK9-211ENST00000557673 LAS1LQ9Y4W2 734 aaKnown RBP21.59■■□□□ 1.05
NEK9-211ENST00000557673 CHL1O00533 1208 aa21.58■■□□□ 1.05
NEK9-211ENST00000557673 HSPA8P11142 646 aaKnown RBP21.58■■□□□ 1.05
NEK9-211ENST00000557673 DPP8Q6V1X1 898 aaPredicted RBP21.58■■□□□ 1.05
NEK9-211ENST00000557673 LRP10Q7Z4F1 713 aa21.58■■□□□ 1.05
NEK9-211ENST00000557673 SP8Q8IXZ3 490 aa21.58■■□□□ 1.05
NEK9-211ENST00000557673 CAPNS2Q96L46 248 aa21.58■■□□□ 1.05
NEK9-211ENST00000557673 ABCC4O15439 1325 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms