RNA–Protein interactions for RNA: ENST00000557440.1

LINC00639-205, long intergenic non-protein coding RNA 639, humanhuman

TSL 2

Gene LINC00639, Length 3,644 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00639-205ENST00000557440 ISY1Q9ULR0 285 aaKnown RBP16.39■□□□□ 0.21
LINC00639-205ENST00000557440 BRD1O95696 1058 aa16.38■□□□□ 0.21
LINC00639-205ENST00000557440 CREB3L3Q68CJ9 461 aa16.38■□□□□ 0.21
LINC00639-205ENST00000557440 FMNL2Q96PY5 1086 aa16.38■□□□□ 0.21
LINC00639-205ENST00000557440 RGS12O14924 1447 aa16.38■□□□□ 0.21
LINC00639-205ENST00000557440 EPHA10Q5JZY3 1008 aa16.38■□□□□ 0.21
LINC00639-205ENST00000557440 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.38■□□□□ 0.21
LINC00639-205ENST00000557440 RAD50Q92878 1312 aa16.38■□□□□ 0.21
LINC00639-205ENST00000557440 BRF1Q92994 677 aa16.38■□□□□ 0.21
LINC00639-205ENST00000557440 A0A0U1RQG5 324 aaPredicted RBP16.37■□□□□ 0.21
LINC00639-205ENST00000557440 PSMA5P28066 241 aa16.37■□□□□ 0.21
LINC00639-205ENST00000557440 SF3A1Q15459 793 aaKnown RBP16.37■□□□□ 0.21
LINC00639-205ENST00000557440 DDX21Q9NR30 783 aaKnown RBP eCLIP16.37■□□□□ 0.21
LINC00639-205ENST00000557440 ANAPC15P60006 121 aa16.36■□□□□ 0.21
LINC00639-205ENST00000557440 GNL2Q13823 731 aaKnown RBP16.36■□□□□ 0.21
LINC00639-205ENST00000557440 ME3Q16798 604 aa16.36■□□□□ 0.21
LINC00639-205ENST00000557440 GLIPR1L2Q4G1C9 344 aa16.36■□□□□ 0.21
LINC00639-205ENST00000557440 IFNL2Q8IZJ0 200 aa16.36■□□□□ 0.21
LINC00639-205ENST00000557440 TAF6LQ9Y6J9 622 aa16.36■□□□□ 0.21
LINC00639-205ENST00000557440 KIF24Q5T7B8 1368 aa16.36■□□□□ 0.21
LINC00639-205ENST00000557440 ZNF592Q92610 1267 aa16.36■□□□□ 0.21
LINC00639-205ENST00000557440 RICTORQ6R327 1708 aa16.36■□□□□ 0.21
LINC00639-205ENST00000557440 SASH1O94885 1247 aa16.36■□□□□ 0.21
LINC00639-205ENST00000557440 ZNF589Q86UQ0 364 aaPredicted RBP16.36■□□□□ 0.21
LINC00639-205ENST00000557440 SPATA32Q96LK8 384 aa16.36■□□□□ 0.21
LINC00639-205ENST00000557440 CDC42BPGQ6DT37 1551 aa16.35■□□□□ 0.21
LINC00639-205ENST00000557440 JAK2O60674 1132 aa16.35■□□□□ 0.21
LINC00639-205ENST00000557440 F13A1P00488 732 aa16.35■□□□□ 0.21
LINC00639-205ENST00000557440 COL9A3Q14050 684 aaPredicted RBP16.35■□□□□ 0.21
LINC00639-205ENST00000557440 ARHGEF25Q86VW2 580 aa16.35■□□□□ 0.21
LINC00639-205ENST00000557440 LSG1Q9H089 658 aaKnown RBP16.35■□□□□ 0.21
LINC00639-205ENST00000557440 DLC1Q96QB1 1528 aa16.35■□□□□ 0.21
LINC00639-205ENST00000557440 KRT85P78386 507 aa16.35■□□□□ 0.21
LINC00639-205ENST00000557440 CCDC171Q6TFL3 1326 aa16.35■□□□□ 0.21
LINC00639-205ENST00000557440 ADCY5O95622 1261 aa16.34■□□□□ 0.21
LINC00639-205ENST00000557440 TSC1Q92574 1164 aa16.34■□□□□ 0.21
LINC00639-205ENST00000557440 ERCC4Q92889 916 aaPredicted RBP16.34■□□□□ 0.21
LINC00639-205ENST00000557440 STAP2Q9UGK3 403 aa16.34■□□□□ 0.21
LINC00639-205ENST00000557440 SNRPA1P09661 255 aaKnown RBP16.34■□□□□ 0.21
LINC00639-205ENST00000557440 ATP2B1P20020 1258 aa16.33■□□□□ 0.21
LINC00639-205ENST00000557440 TPCN1Q9ULQ1 816 aa16.33■□□□□ 0.21
LINC00639-205ENST00000557440 A0A087WWV3 80 aa16.33■□□□□ 0.2
LINC00639-205ENST00000557440 TTLL7Q6ZT98 887 aa16.33■□□□□ 0.2
LINC00639-205ENST00000557440 CDC37L1Q7L3B6 337 aa16.33■□□□□ 0.2
LINC00639-205ENST00000557440 TRIM5Q9C035 493 aa16.33■□□□□ 0.2
LINC00639-205ENST00000557440 NCOA5Q9HCD5 579 aaKnown RBP16.33■□□□□ 0.2
LINC00639-205ENST00000557440 CCDC39Q9UFE4 941 aa16.33■□□□□ 0.2
LINC00639-205ENST00000557440 USP31Q70CQ4 1352 aa16.33■□□□□ 0.2
LINC00639-205ENST00000557440 USP32Q8NFA0 1604 aa16.33■□□□□ 0.2
LINC00639-205ENST00000557440 ALDH1L1O75891 902 aa16.33■□□□□ 0.2
LINC00639-205ENST00000557440 GCKRQ14397 625 aa16.33■□□□□ 0.2
LINC00639-205ENST00000557440 CSPP1Q1MSJ5 1256 aa16.33■□□□□ 0.2
LINC00639-205ENST00000557440 CCDC82Q8N4S0 544 aa16.33■□□□□ 0.2
LINC00639-205ENST00000557440 TNMDQ9H2S6 317 aa16.33■□□□□ 0.2
LINC00639-205ENST00000557440 UQCRHLA0A096LP55 91 aa16.32■□□□□ 0.2
LINC00639-205ENST00000557440 SLC27A2O14975 620 aa16.32■□□□□ 0.2
LINC00639-205ENST00000557440 IGKV5-2P06315 115 aa16.32■□□□□ 0.2
LINC00639-205ENST00000557440 UQCRHP07919 91 aa16.32■□□□□ 0.2
LINC00639-205ENST00000557440 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.32■□□□□ 0.2
LINC00639-205ENST00000557440 CPLX1O14810 134 aa16.32■□□□□ 0.2
LINC00639-205ENST00000557440 ZNF445P59923 1031 aa16.32■□□□□ 0.2
LINC00639-205ENST00000557440 CCDC183Q5T5S1 534 aa16.32■□□□□ 0.2
LINC00639-205ENST00000557440 Q6ZUG5 572 aa16.32■□□□□ 0.2
LINC00639-205ENST00000557440 NEURL1BA8MQ27 555 aa16.31■□□□□ 0.2
LINC00639-205ENST00000557440 IFIT1P09914 478 aaKnown RBP16.31■□□□□ 0.2
LINC00639-205ENST00000557440 CCDC144CPQ8IYA2 1237 aa16.31■□□□□ 0.2
LINC00639-205ENST00000557440 BECN2A8MW95 431 aa16.31■□□□□ 0.2
LINC00639-205ENST00000557440 CCDC57Q2TAC2 916 aa16.31■□□□□ 0.2
LINC00639-205ENST00000557440 DACT1Q9NYF0 836 aa16.31■□□□□ 0.2
LINC00639-205ENST00000557440 FAM89AQ96GI7 184 aa16.31■□□□□ 0.2
LINC00639-205ENST00000557440 SLC52A2Q9HAB3 445 aa16.31■□□□□ 0.2
LINC00639-205ENST00000557440 ADCY9O60503 1353 aa16.3■□□□□ 0.2
LINC00639-205ENST00000557440 ME1P48163 572 aa16.3■□□□□ 0.2
LINC00639-205ENST00000557440 OTUD7BQ6GQQ9 843 aa16.3■□□□□ 0.2
LINC00639-205ENST00000557440 ISM2Q6H9L7 571 aa16.3■□□□□ 0.2
LINC00639-205ENST00000557440 SASS6Q6UVJ0 657 aa16.3■□□□□ 0.2
LINC00639-205ENST00000557440 INTS4Q96HW7 963 aaKnown RBP16.3■□□□□ 0.2
LINC00639-205ENST00000557440 NEK1Q96PY6 1258 aa16.3■□□□□ 0.2
LINC00639-205ENST00000557440 NUP62CLQ9H1M0 184 aa16.3■□□□□ 0.2
LINC00639-205ENST00000557440 CEP126Q9P2H0 1117 aa16.3■□□□□ 0.2
LINC00639-205ENST00000557440 RIMBP3CA6NJZ7 1639 aa16.3■□□□□ 0.2
LINC00639-205ENST00000557440 RIMBP3BA6NNM3 1639 aa16.3■□□□□ 0.2
LINC00639-205ENST00000557440 RIMBP3Q9UFD9 1639 aa16.3■□□□□ 0.2
LINC00639-205ENST00000557440 IDH1O75874 414 aaKnown RBP16.3■□□□□ 0.2
LINC00639-205ENST00000557440 POLA2Q14181 598 aa16.3■□□□□ 0.2
LINC00639-205ENST00000557440 RRP12Q5JTH9 1297 aaKnown RBP16.3■□□□□ 0.2
LINC00639-205ENST00000557440 HELBQ8NG08 1087 aaPredicted RBP16.3■□□□□ 0.2
LINC00639-205ENST00000557440 APOBRQ0VD83 1088 aa16.3■□□□□ 0.2
LINC00639-205ENST00000557440 DBNLQ9UJU6 430 aaKnown RBP16.3■□□□□ 0.2
LINC00639-205ENST00000557440 KDRP35968 1356 aa16.29■□□□□ 0.2
LINC00639-205ENST00000557440 CYP2E1P05181 493 aaPredicted RBP16.29■□□□□ 0.2
LINC00639-205ENST00000557440 POLR3DP05423 398 aaPredicted RBP16.29■□□□□ 0.2
LINC00639-205ENST00000557440 TTC39AQ5SRH9 613 aa16.29■□□□□ 0.2
LINC00639-205ENST00000557440 C19orf44Q9H6X5 657 aa16.29■□□□□ 0.2
LINC00639-205ENST00000557440 RIMS1Q86UR5 1692 aaKnown RBP16.29■□□□□ 0.2
LINC00639-205ENST00000557440 TTC41PQ6P2S7 1318 aa16.29■□□□□ 0.2
LINC00639-205ENST00000557440 HIP1O00291 1037 aa16.29■□□□□ 0.2
LINC00639-205ENST00000557440 RXRAP19793 462 aa16.29■□□□□ 0.2
LINC00639-205ENST00000557440 UBE2HP62256 183 aa16.29■□□□□ 0.2
LINC00639-205ENST00000557440 CNNM1Q9NRU3 951 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms