RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 ANXA1P04083 346 aa18.66■□□□□ 0.58
SLIRP-210ENST00000557431 ALDH1B1P30837 517 aa18.66■□□□□ 0.58
SLIRP-210ENST00000557431 FMR1Q06787 632 aaKnown RBP eCLIP18.66■□□□□ 0.58
SLIRP-210ENST00000557431 NFE2L2Q16236 605 aa18.66■□□□□ 0.58
SLIRP-210ENST00000557431 KIF6Q6ZMV9 814 aa18.66■□□□□ 0.58
SLIRP-210ENST00000557431 GJA3Q9Y6H8 435 aa18.66■□□□□ 0.58
SLIRP-210ENST00000557431 FZD9O00144 591 aa18.65■□□□□ 0.58
SLIRP-210ENST00000557431 NEFMP07197 916 aa18.65■□□□□ 0.58
SLIRP-210ENST00000557431 CRY2Q49AN0 593 aa18.65■□□□□ 0.58
SLIRP-210ENST00000557431 RPGRQ92834 1020 aaKnown RBP18.65■□□□□ 0.58
SLIRP-210ENST00000557431 VEGFBP49765 207 aa18.64■□□□□ 0.57
SLIRP-210ENST00000557431 NYXQ9GZU5 481 aa18.64■□□□□ 0.57
SLIRP-210ENST00000557431 RIC1Q4ADV7 1423 aa18.64■□□□□ 0.57
SLIRP-210ENST00000557431 POLR2AP24928 1970 aaKnown RBP18.63■□□□□ 0.57
SLIRP-210ENST00000557431 TMEM88BA6NKF7 163 aa18.63■□□□□ 0.57
SLIRP-210ENST00000557431 ERVV-1B6SEH8 477 aa18.63■□□□□ 0.57
SLIRP-210ENST00000557431 RGL2O15211 777 aa18.63■□□□□ 0.57
SLIRP-210ENST00000557431 NTSR2O95665 410 aa18.63■□□□□ 0.57
SLIRP-210ENST00000557431 PNISRQ8TF01 805 aaKnown RBP18.63■□□□□ 0.57
SLIRP-210ENST00000557431 ZNF428Q96B54 188 aa18.63■□□□□ 0.57
SLIRP-210ENST00000557431 DDX60Q8IY21 1712 aaKnown RBP18.63■□□□□ 0.57
SLIRP-210ENST00000557431 EIF2S2P20042 333 aaKnown RBP18.62■□□□□ 0.57
SLIRP-210ENST00000557431 PROSER3Q2NL68 480 aa18.62■□□□□ 0.57
SLIRP-210ENST00000557431 NECTIN2Q92692 538 aa18.62■□□□□ 0.57
SLIRP-210ENST00000557431 PSMD1Q99460 953 aa18.62■□□□□ 0.57
SLIRP-210ENST00000557431 MAPK8IP3Q9UPT6 1336 aa18.61■□□□□ 0.57
SLIRP-210ENST00000557431 PPEF1O14829 653 aaPredicted RBP18.61■□□□□ 0.57
SLIRP-210ENST00000557431 ZNF34Q8IZ26 560 aa18.61■□□□□ 0.57
SLIRP-210ENST00000557431 CNTROBQ8N137 903 aa18.61■□□□□ 0.57
SLIRP-210ENST00000557431 JDP2Q8WYK2 163 aa18.61■□□□□ 0.57
SLIRP-210ENST00000557431 IBTKQ9P2D0 1353 aaPredicted RBP18.6■□□□□ 0.57
SLIRP-210ENST00000557431 EPS15P42566 896 aa18.6■□□□□ 0.57
SLIRP-210ENST00000557431 EIF6P56537 245 aaKnown RBP18.6■□□□□ 0.57
SLIRP-210ENST00000557431 GIGYF2Q6Y7W6 1299 aaKnown RBP18.6■□□□□ 0.57
SLIRP-210ENST00000557431 GPC2Q8N158 579 aa18.6■□□□□ 0.57
SLIRP-210ENST00000557431 LARGE2Q8N3Y3 721 aa18.6■□□□□ 0.57
SLIRP-210ENST00000557431 TSPYL4Q9UJ04 414 aa18.6■□□□□ 0.57
SLIRP-210ENST00000557431 HOXA10P31260 410 aaPredicted RBP18.59■□□□□ 0.57
SLIRP-210ENST00000557431 SCNN1DP51172 638 aa18.59■□□□□ 0.57
SLIRP-210ENST00000557431 PDIA6Q15084 440 aa18.59■□□□□ 0.57
SLIRP-210ENST00000557431 LRP10Q7Z4F1 713 aa18.59■□□□□ 0.57
SLIRP-210ENST00000557431 AOC3Q16853 763 aa18.58■□□□□ 0.56
SLIRP-210ENST00000557431 RBM17Q96I25 401 aaKnown RBP18.58■□□□□ 0.56
SLIRP-210ENST00000557431 COL4A1P02462 1669 aa18.57■□□□□ 0.56
SLIRP-210ENST00000557431 THSD7BQ9C0I4 1608 aa18.57■□□□□ 0.56
SLIRP-210ENST00000557431 KRT24Q2M2I5 525 aa18.57■□□□□ 0.56
SLIRP-210ENST00000557431 PNMA8AQ86V59 439 aaPredicted RBP18.57■□□□□ 0.56
SLIRP-210ENST00000557431 ABT1Q9ULW3 272 aaKnown RBP18.57■□□□□ 0.56
SLIRP-210ENST00000557431 ABCC4O15439 1325 aa18.56■□□□□ 0.56
SLIRP-210ENST00000557431 TRAF5O00463 557 aa18.56■□□□□ 0.56
SLIRP-210ENST00000557431 PPIP5K2O43314 1243 aa18.56■□□□□ 0.56
SLIRP-210ENST00000557431 LMOD1P29536 600 aaPredicted RBP18.56■□□□□ 0.56
SLIRP-210ENST00000557431 RIPK4P57078 832 aa18.56■□□□□ 0.56
SLIRP-210ENST00000557431 AIMP1Q12904 312 aaKnown RBP18.56■□□□□ 0.56
SLIRP-210ENST00000557431 GRM1Q13255 1194 aa18.56■□□□□ 0.56
SLIRP-210ENST00000557431 CC2D2BQ6DHV5 1058 aa18.56■□□□□ 0.56
SLIRP-210ENST00000557431 CRAMP1Q96RY5 1269 aa18.56■□□□□ 0.56
SLIRP-210ENST00000557431 CASP8AP2Q9UKL3 1982 aa18.55■□□□□ 0.56
SLIRP-210ENST00000557431 LRRC37AA6NMS7 1700 aa18.55■□□□□ 0.56
SLIRP-210ENST00000557431 LBX1P52954 281 aa18.55■□□□□ 0.56
SLIRP-210ENST00000557431 DEFB115Q30KQ5 88 aa18.55■□□□□ 0.56
SLIRP-210ENST00000557431 PPP1R42Q7Z4L9 355 aa18.55■□□□□ 0.56
SLIRP-210ENST00000557431 NIM1KQ8IY84 436 aa18.55■□□□□ 0.56
SLIRP-210ENST00000557431 AIDAQ96BJ3 306 aa18.55■□□□□ 0.56
SLIRP-210ENST00000557431 DDX21Q9NR30 783 aaKnown RBP eCLIP18.55■□□□□ 0.56
SLIRP-210ENST00000557431 RASSF10A6NK89 507 aa18.54■□□□□ 0.56
SLIRP-210ENST00000557431 HCLS1P14317 486 aaPredicted RBP18.54■□□□□ 0.56
SLIRP-210ENST00000557431 PAXIP1Q6ZW49 1069 aaPredicted RBP18.54■□□□□ 0.56
SLIRP-210ENST00000557431 CCDC146Q8IYE0 955 aa18.54■□□□□ 0.56
SLIRP-210ENST00000557431 NLRP3Q96P20 1036 aa18.54■□□□□ 0.56
SLIRP-210ENST00000557431 WBP1LQ9NX94 342 aa18.54■□□□□ 0.56
SLIRP-210ENST00000557431 DUOX1Q9NRD9 1551 aa18.54■□□□□ 0.56
SLIRP-210ENST00000557431 ERBB4Q15303 1308 aa18.53■□□□□ 0.56
SLIRP-210ENST00000557431 WDR33Q9C0J8 1336 aaKnown RBP18.53■□□□□ 0.56
SLIRP-210ENST00000557431 CTCFP49711 727 aaPredicted RBP18.53■□□□□ 0.56
SLIRP-210ENST00000557431 NEUROD2Q15784 382 aa18.53■□□□□ 0.56
SLIRP-210ENST00000557431 PARP10Q53GL7 1025 aa18.53■□□□□ 0.56
SLIRP-210ENST00000557431 XAGE3Q8WTP9 111 aa18.53■□□□□ 0.56
SLIRP-210ENST00000557431 UTP14AQ9BVJ6 771 aaKnown RBP18.53■□□□□ 0.56
SLIRP-210ENST00000557431 TMPOP42166 694 aaKnown RBP18.52■□□□□ 0.56
SLIRP-210ENST00000557431 COPS6Q7L5N1 327 aa18.52■□□□□ 0.56
SLIRP-210ENST00000557431 HSPA8P11142 646 aaKnown RBP18.51■□□□□ 0.55
SLIRP-210ENST00000557431 CYP4F22Q6NT55 531 aa18.51■□□□□ 0.55
SLIRP-210ENST00000557431 PRDM10Q9NQV6 1147 aa18.51■□□□□ 0.55
SLIRP-210ENST00000557431 ATP6V0A2Q9Y487 856 aa18.51■□□□□ 0.55
SLIRP-210ENST00000557431 SCN9AQ15858 1988 aa18.5■□□□□ 0.55
SLIRP-210ENST00000557431 SHTN1A0MZ66 631 aa18.5■□□□□ 0.55
SLIRP-210ENST00000557431 CXCL9Q07325 125 aa18.5■□□□□ 0.55
SLIRP-210ENST00000557431 NLRP10Q86W26 655 aa18.5■□□□□ 0.55
SLIRP-210ENST00000557431 PNNQ9H307 717 aaKnown RBP18.5■□□□□ 0.55
SLIRP-210ENST00000557431 LAS1LQ9Y4W2 734 aaKnown RBP18.5■□□□□ 0.55
SLIRP-210ENST00000557431 SPEF2Q9C093 1822 aa18.5■□□□□ 0.55
SLIRP-210ENST00000557431 SLC10A5Q5PT55 438 aa18.49■□□□□ 0.55
SLIRP-210ENST00000557431 CST9Q5W186 159 aa18.49■□□□□ 0.55
SLIRP-210ENST00000557431 RAD17O75943 681 aa18.48■□□□□ 0.55
SLIRP-210ENST00000557431 GMPSP49915 693 aaPredicted RBP18.48■□□□□ 0.55
SLIRP-210ENST00000557431 USP50Q70EL3 339 aaPredicted RBP18.48■□□□□ 0.55
SLIRP-210ENST00000557431 CAPNS2Q96L46 248 aa18.48■□□□□ 0.55
SLIRP-210ENST00000557431 GPRC5DQ9NZD1 345 aa18.48■□□□□ 0.55
SLIRP-210ENST00000557431 TRMT112Q9UI30 125 aaKnown RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms