RNA–Protein interactions for RNA: ENST00000557085.1

PSMC6-213, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 2

Gene PSMC6, Length 890 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-213ENST00000557085 ZAP70P43403 619 aa8.18□□□□□ -1.1
PSMC6-213ENST00000557085 DNM1Q05193 864 aaKnown RBP8.18□□□□□ -1.1
PSMC6-213ENST00000557085 DGKZQ13574 1117 aa8.18□□□□□ -1.1
PSMC6-213ENST00000557085 SUZ12Q15022 739 aaKnown RBP8.18□□□□□ -1.1
PSMC6-213ENST00000557085 NGLY1Q96IV0 654 aa8.18□□□□□ -1.1
PSMC6-213ENST00000557085 CSRNP1Q96S65 589 aa8.18□□□□□ -1.1
PSMC6-213ENST00000557085 FHDC1Q9C0D6 1143 aaPredicted RBP8.18□□□□□ -1.1
PSMC6-213ENST00000557085 CDK11BP21127 795 aaKnown RBP8.17□□□□□ -1.1
PSMC6-213ENST00000557085 SH3PXD2AQ5TCZ1 1133 aa8.17□□□□□ -1.1
PSMC6-213ENST00000557085 GMLQ99445 158 aa8.17□□□□□ -1.1
PSMC6-213ENST00000557085 DNAJC25Q9H1X3 360 aa8.17□□□□□ -1.1
PSMC6-213ENST00000557085 CDK11AQ9UQ88 783 aaPredicted RBP8.17□□□□□ -1.1
PSMC6-213ENST00000557085 AK5Q9Y6K8 562 aa8.17□□□□□ -1.1
PSMC6-213ENST00000557085 NEFLP07196 543 aa8.16□□□□□ -1.1
PSMC6-213ENST00000557085 PCSK2P16519 638 aa8.16□□□□□ -1.1
PSMC6-213ENST00000557085 GNL2Q13823 731 aaKnown RBP8.16□□□□□ -1.1
PSMC6-213ENST00000557085 C1orf53Q5VUE5 145 aa8.16□□□□□ -1.1
PSMC6-213ENST00000557085 L3MBTL2Q969R5 705 aa8.16□□□□□ -1.1
PSMC6-213ENST00000557085 IFT43Q96FT9 208 aa8.16□□□□□ -1.1
PSMC6-213ENST00000557085 CUEDC1Q9NWM3 386 aaPredicted RBP8.16□□□□□ -1.1
PSMC6-213ENST00000557085 CADPSQ9ULU8 1353 aa8.16□□□□□ -1.1
PSMC6-213ENST00000557085 SOBPA7XYQ1 873 aa8.15□□□□□ -1.1
PSMC6-213ENST00000557085 EIF1AYO14602 144 aaKnown RBP8.15□□□□□ -1.1
PSMC6-213ENST00000557085 RPLP1P05386 114 aaKnown RBP8.15□□□□□ -1.1
PSMC6-213ENST00000557085 BMP2P12643 396 aa8.15□□□□□ -1.1
PSMC6-213ENST00000557085 C6orf118Q5T5N4 469 aa8.15□□□□□ -1.1
PSMC6-213ENST00000557085 DPH6Q7L8W6 267 aa8.15□□□□□ -1.1
PSMC6-213ENST00000557085 PPARGC1BQ86YN6 1023 aaKnown RBP8.15□□□□□ -1.1
PSMC6-213ENST00000557085 LINC00528Q8N1L1 170 aa8.15□□□□□ -1.1
PSMC6-213ENST00000557085 MEIOBQ8N635 442 aa8.15□□□□□ -1.1
PSMC6-213ENST00000557085 KDF1Q8NAX2 398 aaPredicted RBP8.15□□□□□ -1.1
PSMC6-213ENST00000557085 TSEN34Q9BSV6 310 aaKnown RBP8.15□□□□□ -1.1
PSMC6-213ENST00000557085 PHACTR1Q9C0D0 580 aa8.15□□□□□ -1.1
PSMC6-213ENST00000557085 CAPN10Q9HC96 672 aa8.15□□□□□ -1.1
PSMC6-213ENST00000557085 PRKAG2Q9UGJ0 569 aa8.15□□□□□ -1.1
PSMC6-213ENST00000557085 ZNF232Q9UNY5 417 aa8.15□□□□□ -1.1
PSMC6-213ENST00000557085 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.15□□□□□ -1.1
PSMC6-213ENST00000557085 CTSHP09668 335 aa8.14□□□□□ -1.11
PSMC6-213ENST00000557085 VSIG8P0DPA2 414 aa8.14□□□□□ -1.11
PSMC6-213ENST00000557085 ACBD3Q9H3P7 528 aa8.14□□□□□ -1.11
PSMC6-213ENST00000557085 FAM13BQ9NYF5 915 aa8.14□□□□□ -1.11
PSMC6-213ENST00000557085 CABP1Q9NZU7 370 aa8.14□□□□□ -1.11
PSMC6-213ENST00000557085 KLK14Q9P0G3 267 aa8.14□□□□□ -1.11
PSMC6-213ENST00000557085 SPG7Q9UQ90 795 aa8.14□□□□□ -1.11
PSMC6-213ENST00000557085 HCN4Q9Y3Q4 1203 aa8.14□□□□□ -1.11
PSMC6-213ENST00000557085 CENPCQ03188 943 aa8.13□□□□□ -1.11
PSMC6-213ENST00000557085 ORC1Q13415 861 aa8.13□□□□□ -1.11
PSMC6-213ENST00000557085 TREML1Q86YW5 311 aa8.13□□□□□ -1.11
PSMC6-213ENST00000557085 NUDT16Q96DE0 195 aaKnown RBP8.13□□□□□ -1.11
PSMC6-213ENST00000557085 ATP2B1P20020 1258 aa8.12□□□□□ -1.11
PSMC6-213ENST00000557085 PTPN12Q05209 780 aaKnown RBP8.12□□□□□ -1.11
PSMC6-213ENST00000557085 Q6ZVU0 165 aa8.12□□□□□ -1.11
PSMC6-213ENST00000557085 NIFKQ9BYG3 293 aaKnown RBP8.12□□□□□ -1.11
PSMC6-213ENST00000557085 GIPC1O14908 333 aa8.11□□□□□ -1.11
PSMC6-213ENST00000557085 CPNE3O75131 537 aaKnown RBP8.11□□□□□ -1.11
PSMC6-213ENST00000557085 EIF4BP23588 611 aaKnown RBP8.11□□□□□ -1.11
PSMC6-213ENST00000557085 KCNMA1Q12791 1236 aa8.11□□□□□ -1.11
PSMC6-213ENST00000557085 CBLBQ13191 982 aa8.11□□□□□ -1.11
PSMC6-213ENST00000557085 HIF1AQ16665 826 aa8.11□□□□□ -1.11
PSMC6-213ENST00000557085 NOP9Q86U38 636 aaKnown RBP8.11□□□□□ -1.11
PSMC6-213ENST00000557085 ZNF654Q8IZM8 581 aa8.11□□□□□ -1.11
PSMC6-213ENST00000557085 GPR152Q8TDT2 470 aa8.11□□□□□ -1.11
PSMC6-213ENST00000557085 RHBDD1Q8TEB9 315 aa8.11□□□□□ -1.11
PSMC6-213ENST00000557085 DDX41Q9UJV9 622 aaKnown RBP8.11□□□□□ -1.11
PSMC6-213ENST00000557085 MAN1A2O60476 641 aa8.1□□□□□ -1.11
PSMC6-213ENST00000557085 PTGIRP43119 386 aa8.1□□□□□ -1.11
PSMC6-213ENST00000557085 GIMAP6Q6P9H5 292 aa8.1□□□□□ -1.11
PSMC6-213ENST00000557085 DNAJC2Q99543 621 aaKnown RBP8.1□□□□□ -1.11
PSMC6-213ENST00000557085 LNPKQ9C0E8 428 aa8.1□□□□□ -1.11
PSMC6-213ENST00000557085 GGNBP2Q9H3C7 697 aa8.1□□□□□ -1.11
PSMC6-213ENST00000557085 BCS1LQ9Y276 419 aa8.1□□□□□ -1.11
PSMC6-213ENST00000557085 PARP3Q9Y6F1 533 aa8.1□□□□□ -1.11
PSMC6-213ENST00000557085 TGFBR3LH3BV60 316 aa8.09□□□□□ -1.11
PSMC6-213ENST00000557085 OPLAHO14841 1288 aa8.09□□□□□ -1.11
PSMC6-213ENST00000557085 TNNI2P48788 182 aa8.09□□□□□ -1.11
PSMC6-213ENST00000557085 GSK3AP49840 483 aa8.09□□□□□ -1.11
PSMC6-213ENST00000557085 TTC16Q8NEE8 873 aa8.09□□□□□ -1.11
PSMC6-213ENST00000557085 NLRP3Q96P20 1036 aa8.09□□□□□ -1.11
PSMC6-213ENST00000557085 ZSCAN10Q96SZ4 725 aaPredicted RBP8.09□□□□□ -1.11
PSMC6-213ENST00000557085 C12orf49Q9H741 205 aa8.09□□□□□ -1.11
PSMC6-213ENST00000557085 GPC6Q9Y625 555 aaPredicted RBP8.09□□□□□ -1.11
PSMC6-213ENST00000557085 C8orf34Q49A92 452 aa8.08□□□□□ -1.12
PSMC6-213ENST00000557085 IER5Q5VY09 327 aa8.08□□□□□ -1.12
PSMC6-213ENST00000557085 XKR5Q6UX68 686 aa8.08□□□□□ -1.12
PSMC6-213ENST00000557085 HS2ST1Q7LGA3 356 aa8.08□□□□□ -1.12
PSMC6-213ENST00000557085 DHX38Q92620 1227 aaKnown RBP8.08□□□□□ -1.12
PSMC6-213ENST00000557085 INPP5FQ9Y2H2 1132 aa8.08□□□□□ -1.12
PSMC6-213ENST00000557085 USP31Q70CQ4 1352 aa8.08□□□□□ -1.12
PSMC6-213ENST00000557085 MEN1O00255 615 aa8.07□□□□□ -1.12
PSMC6-213ENST00000557085 MICAL2O94851 1124 aa8.07□□□□□ -1.12
PSMC6-213ENST00000557085 DNAJA1P31689 397 aaKnown RBP8.07□□□□□ -1.12
PSMC6-213ENST00000557085 GPC1P35052 558 aa8.07□□□□□ -1.12
PSMC6-213ENST00000557085 GTF2F1P35269 517 aaKnown RBP eCLIP8.07□□□□□ -1.12
PSMC6-213ENST00000557085 TXLNAP40222 546 aa8.07□□□□□ -1.12
PSMC6-213ENST00000557085 ST13P50502 369 aaKnown RBP8.07□□□□□ -1.12
PSMC6-213ENST00000557085 RACK1P63244 317 aaKnown RBP8.07□□□□□ -1.12
PSMC6-213ENST00000557085 ARID5AQ03989 594 aa8.07□□□□□ -1.12
PSMC6-213ENST00000557085 RBL2Q08999 1139 aa8.07□□□□□ -1.12
PSMC6-213ENST00000557085 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.07□□□□□ -1.12
PSMC6-213ENST00000557085 ZNF394Q53GI3 561 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms