RNA–Protein interactions for RNA: ENST00000556876.1

CHGA-206, Transcript of chromogranin A, humanhuman

TSL 2

Gene CHGA, Length 912 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-206ENST00000556876 EIF2S2P20042 333 aaKnown RBP22.44■■□□□ 1.18
CHGA-206ENST00000556876 SLC10A5Q5PT55 438 aa22.44■■□□□ 1.18
CHGA-206ENST00000556876 MYBBP1AQ9BQG0 1328 aaKnown RBP22.44■■□□□ 1.18
CHGA-206ENST00000556876 DICER1Q9UPY3 1922 aaKnown RBP22.44■■□□□ 1.18
CHGA-206ENST00000556876 UBN2Q6ZU65 1347 aa22.43■■□□□ 1.18
CHGA-206ENST00000556876 NTSR2O95665 410 aa22.43■■□□□ 1.18
CHGA-206ENST00000556876 ARFGEF2Q9Y6D5 1785 aa22.43■■□□□ 1.18
CHGA-206ENST00000556876 EPHX2P34913 555 aa22.42■■□□□ 1.18
CHGA-206ENST00000556876 WDR43Q15061 677 aaKnown RBP eCLIP22.42■■□□□ 1.18
CHGA-206ENST00000556876 PCNTO95613 3336 aa22.41■■□□□ 1.18
CHGA-206ENST00000556876 CCDC88AQ3V6T2 1871 aa22.41■■□□□ 1.18
CHGA-206ENST00000556876 ABCC12Q96J65 1359 aa22.41■■□□□ 1.18
CHGA-206ENST00000556876 LAMB4A4D0S4 1761 aa22.41■■□□□ 1.18
CHGA-206ENST00000556876 PPEF1O14829 653 aaPredicted RBP22.41■■□□□ 1.18
CHGA-206ENST00000556876 BBOX1O75936 387 aa22.41■■□□□ 1.18
CHGA-206ENST00000556876 PDIA6Q15084 440 aa22.41■■□□□ 1.18
CHGA-206ENST00000556876 SUPT20HQ8NEM7 779 aa22.41■■□□□ 1.18
CHGA-206ENST00000556876 CLEC11AQ9Y240 323 aa22.41■■□□□ 1.18
CHGA-206ENST00000556876 HOXB7P09629 217 aa22.4■■□□□ 1.18
CHGA-206ENST00000556876 LMOD1P29536 600 aaPredicted RBP22.4■■□□□ 1.18
CHGA-206ENST00000556876 EAPPQ56P03 285 aaPredicted RBP22.4■■□□□ 1.18
CHGA-206ENST00000556876 LRP10Q7Z4F1 713 aa22.4■■□□□ 1.18
CHGA-206ENST00000556876 LARGE2Q8N3Y3 721 aa22.4■■□□□ 1.18
CHGA-206ENST00000556876 RUNDC1Q96C34 613 aa22.4■■□□□ 1.18
CHGA-206ENST00000556876 KDM3BQ7LBC6 1761 aa22.4■■□□□ 1.18
CHGA-206ENST00000556876 PASKQ96RG2 1323 aa22.39■■□□□ 1.18
CHGA-206ENST00000556876 ZNF541Q9H0D2 1346 aa22.39■■□□□ 1.18
CHGA-206ENST00000556876 TMEM88BA6NKF7 163 aa22.39■■□□□ 1.17
CHGA-206ENST00000556876 CHL1O00533 1208 aa22.39■■□□□ 1.17
CHGA-206ENST00000556876 OLFM4Q6UX06 510 aa22.39■■□□□ 1.17
CHGA-206ENST00000556876 DDX21Q9NR30 783 aaKnown RBP eCLIP22.39■■□□□ 1.17
CHGA-206ENST00000556876 HSPA1AP0DMV8 641 aaKnown RBP22.38■■□□□ 1.17
CHGA-206ENST00000556876 HSPA1BP0DMV9 641 aaKnown RBP22.38■■□□□ 1.17
CHGA-206ENST00000556876 COPS6Q7L5N1 327 aa22.38■■□□□ 1.17
CHGA-206ENST00000556876 ATP6V0A2Q9Y487 856 aa22.38■■□□□ 1.17
CHGA-206ENST00000556876 POTEIP0CG38 1075 aa22.37■■□□□ 1.17
CHGA-206ENST00000556876 POTEJP0CG39 1038 aa22.37■■□□□ 1.17
CHGA-206ENST00000556876 DDX10Q13206 875 aaKnown RBP22.37■■□□□ 1.17
CHGA-206ENST00000556876 TCIRG1Q13488 830 aa22.37■■□□□ 1.17
CHGA-206ENST00000556876 TMC4Q7Z404 712 aa22.37■■□□□ 1.17
CHGA-206ENST00000556876 NIM1KQ8IY84 436 aa22.37■■□□□ 1.17
CHGA-206ENST00000556876 SCN4AP35499 1836 aa22.36■■□□□ 1.17
CHGA-206ENST00000556876 ITGBL1O95965 494 aaPredicted RBP22.36■■□□□ 1.17
CHGA-206ENST00000556876 COL13A1Q5TAT6 717 aaPredicted RBP22.36■■□□□ 1.17
CHGA-206ENST00000556876 CHMP4AQ9BY43 222 aa22.36■■□□□ 1.17
CHGA-206ENST00000556876 SNED1Q8TER0 1413 aa22.35■■□□□ 1.17
CHGA-206ENST00000556876 TNS4Q8IZW8 715 aa22.35■■□□□ 1.17
CHGA-206ENST00000556876 CNTROBQ8N137 903 aa22.35■■□□□ 1.17
CHGA-206ENST00000556876 SH3TC1Q8TE82 1336 aa22.34■■□□□ 1.17
CHGA-206ENST00000556876 CALD1Q05682 793 aaKnown RBP22.34■■□□□ 1.17
CHGA-206ENST00000556876 NEUROD2Q15784 382 aa22.34■■□□□ 1.17
CHGA-206ENST00000556876 USP50Q70EL3 339 aaPredicted RBP22.34■■□□□ 1.17
CHGA-206ENST00000556876 DDX46Q7L014 1031 aaKnown RBP22.34■■□□□ 1.17
CHGA-206ENST00000556876 NLRP10Q86W26 655 aa22.34■■□□□ 1.17
CHGA-206ENST00000556876 SP8Q8IXZ3 490 aa22.34■■□□□ 1.17
CHGA-206ENST00000556876 XAGE3Q8WTP9 111 aa22.34■■□□□ 1.17
CHGA-206ENST00000556876 DBF4Q9UBU7 674 aaPredicted RBP22.34■■□□□ 1.17
CHGA-206ENST00000556876 MKRN1Q9UHC7 482 aaKnown RBP22.34■■□□□ 1.17
CHGA-206ENST00000556876 TRMT112Q9UI30 125 aaKnown RBP22.34■■□□□ 1.17
CHGA-206ENST00000556876 GJA3Q9Y6H8 435 aa22.34■■□□□ 1.17
CHGA-206ENST00000556876 CNTNAP1P78357 1384 aa22.34■■□□□ 1.17
CHGA-206ENST00000556876 DLG5Q8TDM6 1919 aa22.33■■□□□ 1.17
CHGA-206ENST00000556876 AIMP1Q12904 312 aaKnown RBP22.33■■□□□ 1.17
CHGA-206ENST00000556876 RTFDC1Q9BY42 306 aaPredicted RBP22.33■■□□□ 1.17
CHGA-206ENST00000556876 PPIP5K2O43314 1243 aa22.32■■□□□ 1.16
CHGA-206ENST00000556876 HSP90B1P14625 803 aaKnown RBP22.32■■□□□ 1.16
CHGA-206ENST00000556876 PROSER3Q2NL68 480 aa22.32■■□□□ 1.16
CHGA-206ENST00000556876 CFAP44Q96MT7 982 aa22.32■■□□□ 1.16
CHGA-206ENST00000556876 HYPKQ9NX55 129 aa22.32■■□□□ 1.16
CHGA-206ENST00000556876 HDGFL1Q5TGJ6 251 aa22.31■■□□□ 1.16
CHGA-206ENST00000556876 DPP8Q6V1X1 898 aaPredicted RBP22.31■■□□□ 1.16
CHGA-206ENST00000556876 PLBD2Q8NHP8 589 aa22.31■■□□□ 1.16
CHGA-206ENST00000556876 ZNRF3Q9ULT6 936 aa22.31■■□□□ 1.16
CHGA-206ENST00000556876 LAS1LQ9Y4W2 734 aaKnown RBP22.31■■□□□ 1.16
CHGA-206ENST00000556876 NUP98P52948 1817 aa22.31■■□□□ 1.16
CHGA-206ENST00000556876 TCERG1O14776 1098 aaKnown RBP22.3■■□□□ 1.16
CHGA-206ENST00000556876 ANKRD13DQ6ZTN6 518 aa22.3■■□□□ 1.16
CHGA-206ENST00000556876 CCDC146Q8IYE0 955 aa22.3■■□□□ 1.16
CHGA-206ENST00000556876 MPNDQ8N594 471 aa22.3■■□□□ 1.16
CHGA-206ENST00000556876 AIDAQ96BJ3 306 aa22.3■■□□□ 1.16
CHGA-206ENST00000556876 TRIM35Q9UPQ4 493 aa22.3■■□□□ 1.16
CHGA-206ENST00000556876 ABCC4O15439 1325 aa22.3■■□□□ 1.16
CHGA-206ENST00000556876 ANXA1P04083 346 aa22.29■■□□□ 1.16
CHGA-206ENST00000556876 GRAPQ13588 217 aa22.29■■□□□ 1.16
CHGA-206ENST00000556876 GRAPLQ8TC17 118 aaPredicted RBP22.29■■□□□ 1.16
CHGA-206ENST00000556876 NECTIN2Q92692 538 aa22.29■■□□□ 1.16
CHGA-206ENST00000556876 ADAMTS8Q9UP79 889 aa22.29■■□□□ 1.16
CHGA-206ENST00000556876 TNIP1Q15025 636 aa22.28■■□□□ 1.16
CHGA-206ENST00000556876 DEFB115Q30KQ5 88 aa22.28■■□□□ 1.16
CHGA-206ENST00000556876 MAP1SQ66K74 1059 aaPredicted RBP22.28■■□□□ 1.16
CHGA-206ENST00000556876 C3orf67Q6ZVT6 689 aa22.28■■□□□ 1.16
CHGA-206ENST00000556876 CACNA1SQ13698 1873 aa22.28■■□□□ 1.16
CHGA-206ENST00000556876 CDHR2Q9BYE9 1310 aa22.28■■□□□ 1.16
CHGA-206ENST00000556876 RASSF10A6NK89 507 aa22.27■■□□□ 1.16
CHGA-206ENST00000556876 SCNN1DP51172 638 aa22.27■■□□□ 1.16
CHGA-206ENST00000556876 TRIM28Q13263 835 aaKnown RBP22.27■■□□□ 1.16
CHGA-206ENST00000556876 ADARB2Q9NS39 739 aaKnown RBP22.27■■□□□ 1.16
CHGA-206ENST00000556876 CHPF2Q9P2E5 772 aa22.27■■□□□ 1.16
CHGA-206ENST00000556876 HCLS1P14317 486 aaPredicted RBP22.26■■□□□ 1.15
CHGA-206ENST00000556876 KIAA2012Q0VF49 1180 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms