RNA–Protein interactions for RNA: ENST00000556631.1

KTN1-224, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 5,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-224ENST00000556631 ARFGAP3Q9NP61 516 aa2.15□□□□□ -2.07
KTN1-224ENST00000556631 CNNM1Q9NRU3 951 aa2.15□□□□□ -2.07
KTN1-224ENST00000556631 SMC4Q9NTJ3 1288 aa2.15□□□□□ -2.07
KTN1-224ENST00000556631 PPP1R9AQ9ULJ8 1098 aa2.15□□□□□ -2.07
KTN1-224ENST00000556631 GTF2A1LQ9UNN4 478 aa2.15□□□□□ -2.07
KTN1-224ENST00000556631 TLDC2A0PJX2 215 aa2.15□□□□□ -2.07
KTN1-224ENST00000556631 K7ELQ4 463 aaPredicted RBP2.15□□□□□ -2.07
KTN1-224ENST00000556631 LZTS3O60299 673 aaPredicted RBP2.15□□□□□ -2.07
KTN1-224ENST00000556631 TPM1P09493 284 aa2.15□□□□□ -2.07
KTN1-224ENST00000556631 RFC5P40937 340 aa2.15□□□□□ -2.07
KTN1-224ENST00000556631 EPS15P42566 896 aa2.15□□□□□ -2.07
KTN1-224ENST00000556631 SESN3P58005 492 aa2.15□□□□□ -2.07
KTN1-224ENST00000556631 MCCD1P59942 119 aaPredicted RBP2.15□□□□□ -2.07
KTN1-224ENST00000556631 NMIQ13287 307 aaPredicted RBP2.15□□□□□ -2.07
KTN1-224ENST00000556631 TBC1D10BQ4KMP7 808 aaPredicted RBP2.15□□□□□ -2.07
KTN1-224ENST00000556631 CEP135Q66GS9 1140 aa2.15□□□□□ -2.07
KTN1-224ENST00000556631 PPP1R21Q6ZMI0 780 aa2.15□□□□□ -2.07
KTN1-224ENST00000556631 RAPH1Q70E73 1250 aa2.15□□□□□ -2.07
KTN1-224ENST00000556631 NBPF5PQ86XG9 351 aaPredicted RBP2.15□□□□□ -2.07
KTN1-224ENST00000556631 ZNF280CQ8ND82 737 aa2.15□□□□□ -2.07
KTN1-224ENST00000556631 USP7Q93009 1102 aa2.15□□□□□ -2.07
KTN1-224ENST00000556631 ZMAT2Q96NC0 199 aaKnown RBP2.15□□□□□ -2.07
KTN1-224ENST00000556631 C8orf37Q96NL8 207 aa2.15□□□□□ -2.07
KTN1-224ENST00000556631 PPP1R12CQ9BZL4 782 aa2.15□□□□□ -2.07
KTN1-224ENST00000556631 TRIM6Q9C030 488 aaPredicted RBP2.15□□□□□ -2.07
KTN1-224ENST00000556631 PLSCR2Q9NRY7 297 aa2.15□□□□□ -2.07
KTN1-224ENST00000556631 TTF2Q9UNY4 1162 aaKnown RBP2.15□□□□□ -2.07
KTN1-224ENST00000556631 BICDL2A1A5D9 508 aa2.14□□□□□ -2.07
KTN1-224ENST00000556631 CPLX1O14810 134 aa2.14□□□□□ -2.07
KTN1-224ENST00000556631 HNRNPCL1O60812 293 aaKnown RBP2.14□□□□□ -2.07
KTN1-224ENST00000556631 KRT10P13645 584 aa2.14□□□□□ -2.07
KTN1-224ENST00000556631 GJA8P48165 433 aa2.14□□□□□ -2.07
KTN1-224ENST00000556631 RAB15P59190 212 aa2.14□□□□□ -2.07
KTN1-224ENST00000556631 MRPS35P82673 323 aaKnown RBP2.14□□□□□ -2.07
KTN1-224ENST00000556631 TMED1Q13445 227 aa2.14□□□□□ -2.07
KTN1-224ENST00000556631 PUM3Q15397 648 aaKnown RBP2.14□□□□□ -2.07
KTN1-224ENST00000556631 GRAMD1BQ3KR37 738 aa2.14□□□□□ -2.07
KTN1-224ENST00000556631 ALFQ53S48 1182 aa2.14□□□□□ -2.07
KTN1-224ENST00000556631 ZBTB33Q86T24 672 aa2.14□□□□□ -2.07
KTN1-224ENST00000556631 HOOK3Q86VS8 718 aa2.14□□□□□ -2.07
KTN1-224ENST00000556631 PARP9Q8IXQ6 854 aa2.14□□□□□ -2.07
KTN1-224ENST00000556631 ENAHQ8N8S7 591 aaPredicted RBP2.14□□□□□ -2.07
KTN1-224ENST00000556631 C1orf131Q8NDD1 294 aaKnown RBP2.14□□□□□ -2.07
KTN1-224ENST00000556631 SGIP1Q9BQI5 828 aa2.14□□□□□ -2.07
KTN1-224ENST00000556631 MTA3Q9BTC8 594 aa2.14□□□□□ -2.07
KTN1-224ENST00000556631 EFCC1Q9HA90 598 aa2.14□□□□□ -2.07
KTN1-224ENST00000556631 CFAP45Q9UL16 551 aa2.14□□□□□ -2.07
KTN1-224ENST00000556631 EPB41L3Q9Y2J2 1087 aaPredicted RBP2.14□□□□□ -2.07
KTN1-224ENST00000556631 ERC2O15083 957 aa2.14□□□□□ -2.07
KTN1-224ENST00000556631 ZEB2O60315 1214 aa2.14□□□□□ -2.07
KTN1-224ENST00000556631 HIP1RO75146 1068 aa2.14□□□□□ -2.07
KTN1-224ENST00000556631 WBP4O75554 376 aaKnown RBP2.14□□□□□ -2.07
KTN1-224ENST00000556631 SASH1O94885 1247 aa2.14□□□□□ -2.07
KTN1-224ENST00000556631 HNRNPCP07910 306 aaKnown RBP eCLIP2.14□□□□□ -2.07
KTN1-224ENST00000556631 FOSL1P15407 271 aa2.14□□□□□ -2.07
KTN1-224ENST00000556631 FOXD4Q12950 439 aaPredicted RBP2.14□□□□□ -2.07
KTN1-224ENST00000556631 CAMK4Q16566 473 aa2.14□□□□□ -2.07
KTN1-224ENST00000556631 NOM1Q5C9Z4 860 aaKnown RBP2.14□□□□□ -2.07
KTN1-224ENST00000556631 DDX46Q7L014 1031 aaKnown RBP2.14□□□□□ -2.07
KTN1-224ENST00000556631 C11orf74Q86VG3 221 aa2.14□□□□□ -2.07
KTN1-224ENST00000556631 DZIP3Q86Y13 1208 aaKnown RBP2.14□□□□□ -2.07
KTN1-224ENST00000556631 RPAP2Q8IXW5 612 aaPredicted RBP2.14□□□□□ -2.07
KTN1-224ENST00000556631 POM121Q96HA1 1249 aa2.14□□□□□ -2.07
KTN1-224ENST00000556631 PARP2Q9UGN5 583 aa2.14□□□□□ -2.07
KTN1-224ENST00000556631 NUB1Q9Y5A7 615 aa2.14□□□□□ -2.07
KTN1-224ENST00000556631 PEG3Q9GZU2 1588 aa2.14□□□□□ -2.07
KTN1-224ENST00000556631 PALM3A6NDB9 673 aaPredicted RBP2.14□□□□□ -2.07
KTN1-224ENST00000556631 HNRNPCL2B2RXH8 293 aa2.14□□□□□ -2.07
KTN1-224ENST00000556631 F5H423 210 aaPredicted RBP2.14□□□□□ -2.07
KTN1-224ENST00000556631 NDC80O14777 642 aa2.14□□□□□ -2.07
KTN1-224ENST00000556631 KIF20AO95235 890 aa2.14□□□□□ -2.07
KTN1-224ENST00000556631 GRK2P25098 689 aa2.14□□□□□ -2.07
KTN1-224ENST00000556631 MRE11P49959 708 aa2.14□□□□□ -2.07
KTN1-224ENST00000556631 POLGP54098 1239 aaPredicted RBP2.14□□□□□ -2.07
KTN1-224ENST00000556631 SNX16P57768 344 aa2.14□□□□□ -2.07
KTN1-224ENST00000556631 POU5F1BQ06416 359 aa2.14□□□□□ -2.07
KTN1-224ENST00000556631 FAPQ12884 760 aa2.14□□□□□ -2.07
KTN1-224ENST00000556631 KIF22Q14807 665 aa2.14□□□□□ -2.07
KTN1-224ENST00000556631 CNNM4Q6P4Q7 775 aa2.14□□□□□ -2.07
KTN1-224ENST00000556631 GBP6Q6ZN66 633 aa2.14□□□□□ -2.07
KTN1-224ENST00000556631 SERBP1Q8NC51 408 aaKnown RBP eCLIP2.14□□□□□ -2.07
KTN1-224ENST00000556631 N4BP2L2Q92802 583 aaPredicted RBP2.14□□□□□ -2.07
KTN1-224ENST00000556631 MFRPQ9BY79 579 aa2.14□□□□□ -2.07
KTN1-224ENST00000556631 ZBTB3Q9H5J0 574 aa2.14□□□□□ -2.07
KTN1-224ENST00000556631 XPO5Q9HAV4 1204 aaKnown RBP eCLIP2.14□□□□□ -2.07
KTN1-224ENST00000556631 INCENPQ9NQS7 918 aa2.14□□□□□ -2.07
KTN1-224ENST00000556631 CREBZFQ9NS37 354 aa2.14□□□□□ -2.07
KTN1-224ENST00000556631 ATP5J2-PTCD1G3V325 749 aa2.14□□□□□ -2.07
KTN1-224ENST00000556631 PPP1R37O75864 691 aa2.14□□□□□ -2.07
KTN1-224ENST00000556631 CSPG5O95196 566 aa2.14□□□□□ -2.07
KTN1-224ENST00000556631 P4HBP07237 508 aaKnown RBP2.14□□□□□ -2.07
KTN1-224ENST00000556631 SLC3A2P08195 630 aaKnown RBP2.14□□□□□ -2.07
KTN1-224ENST00000556631 NF2P35240 595 aa2.14□□□□□ -2.07
KTN1-224ENST00000556631 MLLT1Q03111 559 aaPredicted RBP2.14□□□□□ -2.07
KTN1-224ENST00000556631 RAD51AP2Q09MP3 1159 aa2.14□□□□□ -2.07
KTN1-224ENST00000556631 TRIM32Q13049 653 aa2.14□□□□□ -2.07
KTN1-224ENST00000556631 LARP1BQ659C4 914 aaKnown RBP2.14□□□□□ -2.07
KTN1-224ENST00000556631 RIC3Q7Z5B4 369 aa2.14□□□□□ -2.07
KTN1-224ENST00000556631 USP48Q86UV5 1035 aa2.14□□□□□ -2.07
KTN1-224ENST00000556631 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms