RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 HTRA3P83110 453 aa13.76□□□□□ -0.21
SPTLC2-205ENST00000556607 HSP90AB3PQ58FF7 597 aa13.76□□□□□ -0.21
SPTLC2-205ENST00000556607 HDGFL1Q5TGJ6 251 aa13.76□□□□□ -0.21
SPTLC2-205ENST00000556607 SYNE4Q8N205 404 aa13.76□□□□□ -0.21
SPTLC2-205ENST00000556607 C7orf43Q8WVR3 580 aa13.76□□□□□ -0.21
SPTLC2-205ENST00000556607 TMX4Q9H1E5 349 aaPredicted RBP13.76□□□□□ -0.21
SPTLC2-205ENST00000556607 DDX21Q9NR30 783 aaKnown RBP eCLIP13.76□□□□□ -0.21
SPTLC2-205ENST00000556607 IBTKQ9P2D0 1353 aaPredicted RBP13.75□□□□□ -0.21
SPTLC2-205ENST00000556607 APAF1O14727 1248 aa13.75□□□□□ -0.21
SPTLC2-205ENST00000556607 ZEB1P37275 1124 aaPredicted RBP13.75□□□□□ -0.21
SPTLC2-205ENST00000556607 ZNF428Q96B54 188 aa13.75□□□□□ -0.21
SPTLC2-205ENST00000556607 CFAP44Q96MT7 982 aa13.75□□□□□ -0.21
SPTLC2-205ENST00000556607 CHPF2Q9P2E5 772 aa13.75□□□□□ -0.21
SPTLC2-205ENST00000556607 IARSP41252 1262 aaKnown RBP13.74□□□□□ -0.21
SPTLC2-205ENST00000556607 CRY2Q49AN0 593 aa13.74□□□□□ -0.21
SPTLC2-205ENST00000556607 LRP10Q7Z4F1 713 aa13.74□□□□□ -0.21
SPTLC2-205ENST00000556607 POTECB2RU33 542 aa13.73□□□□□ -0.21
SPTLC2-205ENST00000556607 ELL2O00472 640 aaPredicted RBP13.73□□□□□ -0.21
SPTLC2-205ENST00000556607 PPEF1O14829 653 aaPredicted RBP13.73□□□□□ -0.21
SPTLC2-205ENST00000556607 CALD1Q05682 793 aaKnown RBP13.73□□□□□ -0.21
SPTLC2-205ENST00000556607 TCIRG1Q13488 830 aa13.73□□□□□ -0.21
SPTLC2-205ENST00000556607 DUSP27Q5VZP5 1158 aa13.73□□□□□ -0.21
SPTLC2-205ENST00000556607 JDP2Q8WYK2 163 aa13.73□□□□□ -0.21
SPTLC2-205ENST00000556607 MBIPQ9NS73 344 aa13.73□□□□□ -0.21
SPTLC2-205ENST00000556607 DBF4Q9UBU7 674 aaPredicted RBP13.73□□□□□ -0.21
SPTLC2-205ENST00000556607 TRMT112Q9UI30 125 aaKnown RBP13.73□□□□□ -0.21
SPTLC2-205ENST00000556607 LAMB2P55268 1798 aa13.73□□□□□ -0.21
SPTLC2-205ENST00000556607 IQCA1LA6NCM1 817 aa13.72□□□□□ -0.21
SPTLC2-205ENST00000556607 GNAI1P63096 354 aa13.72□□□□□ -0.21
SPTLC2-205ENST00000556607 CC2D2BQ6DHV5 1058 aa13.72□□□□□ -0.21
SPTLC2-205ENST00000556607 CRAMP1Q96RY5 1269 aa13.72□□□□□ -0.21
SPTLC2-205ENST00000556607 RIC1Q4ADV7 1423 aa13.72□□□□□ -0.21
SPTLC2-205ENST00000556607 SCN4AP35499 1836 aa13.71□□□□□ -0.21
SPTLC2-205ENST00000556607 ZNF541Q9H0D2 1346 aa13.71□□□□□ -0.21
SPTLC2-205ENST00000556607 HOXB7P09629 217 aa13.71□□□□□ -0.21
SPTLC2-205ENST00000556607 HCLS1P14317 486 aaPredicted RBP13.71□□□□□ -0.21
SPTLC2-205ENST00000556607 HOXA10P31260 410 aaPredicted RBP13.71□□□□□ -0.21
SPTLC2-205ENST00000556607 EAPPQ56P03 285 aaPredicted RBP13.71□□□□□ -0.21
SPTLC2-205ENST00000556607 ANKRD13DQ6ZTN6 518 aa13.71□□□□□ -0.21
SPTLC2-205ENST00000556607 C3orf67Q6ZVT6 689 aa13.71□□□□□ -0.21
SPTLC2-205ENST00000556607 NLRP10Q86W26 655 aa13.71□□□□□ -0.21
SPTLC2-205ENST00000556607 CLEC11AQ9Y240 323 aa13.71□□□□□ -0.21
SPTLC2-205ENST00000556607 SH3TC1Q8TE82 1336 aa13.7□□□□□ -0.22
SPTLC2-205ENST00000556607 EIF6P56537 245 aaKnown RBP13.7□□□□□ -0.22
SPTLC2-205ENST00000556607 CHADLQ6NUI6 762 aa13.7□□□□□ -0.22
SPTLC2-205ENST00000556607 RIC3Q7Z5B4 369 aa13.7□□□□□ -0.22
SPTLC2-205ENST00000556607 LARGE2Q8N3Y3 721 aa13.7□□□□□ -0.22
SPTLC2-205ENST00000556607 DNAJC5GQ8N7S2 189 aa13.7□□□□□ -0.22
SPTLC2-205ENST00000556607 PLBD2Q8NHP8 589 aa13.7□□□□□ -0.22
SPTLC2-205ENST00000556607 PSMD1Q99460 953 aa13.7□□□□□ -0.22
SPTLC2-205ENST00000556607 IFT57Q9NWB7 429 aa13.7□□□□□ -0.22
SPTLC2-205ENST00000556607 HYPKQ9NX55 129 aa13.7□□□□□ -0.22
SPTLC2-205ENST00000556607 GJA3Q9Y6H8 435 aa13.7□□□□□ -0.22
SPTLC2-205ENST00000556607 RNF123Q5XPI4 1314 aa13.69□□□□□ -0.22
SPTLC2-205ENST00000556607 ATP5J2-PTCD1G3V325 749 aa13.69□□□□□ -0.22
SPTLC2-205ENST00000556607 POTEIP0CG38 1075 aa13.69□□□□□ -0.22
SPTLC2-205ENST00000556607 POTEJP0CG39 1038 aa13.69□□□□□ -0.22
SPTLC2-205ENST00000556607 GRIPAP1Q4V328 841 aa13.69□□□□□ -0.22
SPTLC2-205ENST00000556607 RTL5Q5HYW3 569 aaPredicted RBP13.69□□□□□ -0.22
SPTLC2-205ENST00000556607 SLC10A5Q5PT55 438 aa13.69□□□□□ -0.22
SPTLC2-205ENST00000556607 DDX46Q7L014 1031 aaKnown RBP13.69□□□□□ -0.22
SPTLC2-205ENST00000556607 KLRG1Q96E93 195 aa13.69□□□□□ -0.22
SPTLC2-205ENST00000556607 TAF1P21675 1872 aa13.69□□□□□ -0.22
SPTLC2-205ENST00000556607 CEP350Q5VT06 3117 aa13.69□□□□□ -0.22
SPTLC2-205ENST00000556607 ABCC4O15439 1325 aa13.68□□□□□ -0.22
SPTLC2-205ENST00000556607 FZD9O00144 591 aa13.68□□□□□ -0.22
SPTLC2-205ENST00000556607 ANP32CO43423 234 aa13.68□□□□□ -0.22
SPTLC2-205ENST00000556607 GOLGA2Q08379 1002 aa13.68□□□□□ -0.22
SPTLC2-205ENST00000556607 CCDC184Q52MB2 194 aa13.68□□□□□ -0.22
SPTLC2-205ENST00000556607 HACL1Q9UJ83 578 aa13.68□□□□□ -0.22
SPTLC2-205ENST00000556607 ZNF316A6NFI3 1004 aaPredicted RBP13.67□□□□□ -0.22
SPTLC2-205ENST00000556607 PPIP5K2O43314 1243 aa13.67□□□□□ -0.22
SPTLC2-205ENST00000556607 ZNF853P0CG23 659 aa13.67□□□□□ -0.22
SPTLC2-205ENST00000556607 SLC51AQ86UW1 340 aa13.67□□□□□ -0.22
SPTLC2-205ENST00000556607 NIM1KQ8IY84 436 aa13.67□□□□□ -0.22
SPTLC2-205ENST00000556607 GPC2Q8N158 579 aa13.67□□□□□ -0.22
SPTLC2-205ENST00000556607 SUPT20HQ8NEM7 779 aa13.67□□□□□ -0.22
SPTLC2-205ENST00000556607 FAM89AQ96GI7 184 aa13.67□□□□□ -0.22
SPTLC2-205ENST00000556607 L3MBTL3Q96JM7 780 aaPredicted RBP13.67□□□□□ -0.22
SPTLC2-205ENST00000556607 TAF1DQ9H5J8 278 aaPredicted RBP13.67□□□□□ -0.22
SPTLC2-205ENST00000556607 PHAXQ9H814 394 aaKnown RBP13.67□□□□□ -0.22
SPTLC2-205ENST00000556607 ATP6V0A2Q9Y487 856 aa13.67□□□□□ -0.22
SPTLC2-205ENST00000556607 DDX60Q8IY21 1712 aaKnown RBP13.67□□□□□ -0.22
SPTLC2-205ENST00000556607 BBOX1O75936 387 aa13.66□□□□□ -0.22
SPTLC2-205ENST00000556607 LMOD1P29536 600 aaPredicted RBP13.66□□□□□ -0.22
SPTLC2-205ENST00000556607 EPHX2P34913 555 aa13.66□□□□□ -0.22
SPTLC2-205ENST00000556607 AOC3Q16853 763 aa13.66□□□□□ -0.22
SPTLC2-205ENST00000556607 DPP8Q6V1X1 898 aaPredicted RBP13.66□□□□□ -0.22
SPTLC2-205ENST00000556607 LDHDQ86WU2 507 aa13.66□□□□□ -0.22
SPTLC2-205ENST00000556607 MRS2Q9HD23 443 aa13.66□□□□□ -0.22
SPTLC2-205ENST00000556607 GRAPQ13588 217 aa13.65□□□□□ -0.22
SPTLC2-205ENST00000556607 CCDC30Q5VVM6 783 aa13.65□□□□□ -0.22
SPTLC2-205ENST00000556607 PNMA8AQ86V59 439 aaPredicted RBP13.65□□□□□ -0.22
SPTLC2-205ENST00000556607 MPNDQ8N594 471 aa13.65□□□□□ -0.22
SPTLC2-205ENST00000556607 C8orf58Q8NAV2 365 aa13.65□□□□□ -0.22
SPTLC2-205ENST00000556607 GRAPLQ8TC17 118 aaPredicted RBP13.65□□□□□ -0.22
SPTLC2-205ENST00000556607 MYD88Q99836 296 aa13.65□□□□□ -0.22
SPTLC2-205ENST00000556607 CHMP4AQ9BY43 222 aa13.65□□□□□ -0.22
SPTLC2-205ENST00000556607 SNED1Q8TER0 1413 aa13.64□□□□□ -0.23
SPTLC2-205ENST00000556607 SP8Q8IXZ3 490 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms