RNA–Protein interactions for RNA: ENST00000556417.5

LINC00520-204, long intergenic non-protein coding RNA 520, humanhuman

TSL 3 BASIC

Gene LINC00520, Length 778 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00520-204ENST00000556417 RNF123Q5XPI4 1314 aa11.78□□□□□ -0.52
LINC00520-204ENST00000556417 CNTNAP1P78357 1384 aa11.78□□□□□ -0.52
LINC00520-204ENST00000556417 TMEM88BA6NKF7 163 aa11.77□□□□□ -0.53
LINC00520-204ENST00000556417 NTSR2O95665 410 aa11.77□□□□□ -0.53
LINC00520-204ENST00000556417 CC2D2BQ6DHV5 1058 aa11.77□□□□□ -0.53
LINC00520-204ENST00000556417 PNMA8AQ86V59 439 aaPredicted RBP11.77□□□□□ -0.53
LINC00520-204ENST00000556417 CNTROBQ8N137 903 aa11.77□□□□□ -0.53
LINC00520-204ENST00000556417 JDP2Q8WYK2 163 aa11.77□□□□□ -0.53
LINC00520-204ENST00000556417 RPGRQ92834 1020 aaKnown RBP11.77□□□□□ -0.53
LINC00520-204ENST00000556417 IBTKQ9P2D0 1353 aaPredicted RBP11.77□□□□□ -0.53
LINC00520-204ENST00000556417 CACNA1SQ13698 1873 aa11.76□□□□□ -0.53
LINC00520-204ENST00000556417 VEGFBP49765 207 aa11.76□□□□□ -0.53
LINC00520-204ENST00000556417 PDIA6Q15084 440 aa11.76□□□□□ -0.53
LINC00520-204ENST00000556417 MAP1SQ66K74 1059 aaPredicted RBP11.76□□□□□ -0.53
LINC00520-204ENST00000556417 GIGYF2Q6Y7W6 1299 aaKnown RBP11.76□□□□□ -0.53
LINC00520-204ENST00000556417 C3orf67Q6ZVT6 689 aa11.76□□□□□ -0.53
LINC00520-204ENST00000556417 CRAMP1Q96RY5 1269 aa11.76□□□□□ -0.53
LINC00520-204ENST00000556417 PNNQ9H307 717 aaKnown RBP11.76□□□□□ -0.53
LINC00520-204ENST00000556417 RIC1Q4ADV7 1423 aa11.76□□□□□ -0.53
LINC00520-204ENST00000556417 COL4A5P29400 1685 aa11.75□□□□□ -0.53
LINC00520-204ENST00000556417 KDM3BQ7LBC6 1761 aa11.75□□□□□ -0.53
LINC00520-204ENST00000556417 FOXN1O15353 648 aa11.75□□□□□ -0.53
LINC00520-204ENST00000556417 GRIPAP1Q4V328 841 aa11.75□□□□□ -0.53
LINC00520-204ENST00000556417 RBM17Q96I25 401 aaKnown RBP11.75□□□□□ -0.53
LINC00520-204ENST00000556417 TSPYL4Q9UJ04 414 aa11.75□□□□□ -0.53
LINC00520-204ENST00000556417 ERBB4Q15303 1308 aa11.75□□□□□ -0.53
LINC00520-204ENST00000556417 MAPK8IP3Q9UPT6 1336 aa11.75□□□□□ -0.53
LINC00520-204ENST00000556417 LAMB4A4D0S4 1761 aa11.74□□□□□ -0.53
LINC00520-204ENST00000556417 SCN4AP35499 1836 aa11.74□□□□□ -0.53
LINC00520-204ENST00000556417 TCERG1O14776 1098 aaKnown RBP11.74□□□□□ -0.53
LINC00520-204ENST00000556417 PPEF1O14829 653 aaPredicted RBP11.74□□□□□ -0.53
LINC00520-204ENST00000556417 EIF2S2P20042 333 aaKnown RBP11.74□□□□□ -0.53
LINC00520-204ENST00000556417 SCNN1DP51172 638 aa11.74□□□□□ -0.53
LINC00520-204ENST00000556417 EIF6P56537 245 aaKnown RBP11.74□□□□□ -0.53
LINC00520-204ENST00000556417 RIPK4P57078 832 aa11.74□□□□□ -0.53
LINC00520-204ENST00000556417 PROSER3Q2NL68 480 aa11.74□□□□□ -0.53
LINC00520-204ENST00000556417 PARP10Q53GL7 1025 aa11.74□□□□□ -0.53
LINC00520-204ENST00000556417 SLC10A5Q5PT55 438 aa11.74□□□□□ -0.53
LINC00520-204ENST00000556417 PPP1R42Q7Z4L9 355 aa11.74□□□□□ -0.53
LINC00520-204ENST00000556417 NLRP3Q96P20 1036 aa11.74□□□□□ -0.53
LINC00520-204ENST00000556417 GJA3Q9Y6H8 435 aa11.74□□□□□ -0.53
LINC00520-204ENST00000556417 RASSF10A6NK89 507 aa11.73□□□□□ -0.53
LINC00520-204ENST00000556417 ANXA1P04083 346 aa11.73□□□□□ -0.53
LINC00520-204ENST00000556417 EPS15P42566 896 aa11.73□□□□□ -0.53
LINC00520-204ENST00000556417 DEFB115Q30KQ5 88 aa11.73□□□□□ -0.53
LINC00520-204ENST00000556417 LARGE2Q8N3Y3 721 aa11.73□□□□□ -0.53
LINC00520-204ENST00000556417 ADAMTSL1Q8N6G6 1762 aa11.73□□□□□ -0.53
LINC00520-204ENST00000556417 BABAM1Q9NWV8 329 aa11.73□□□□□ -0.53
LINC00520-204ENST00000556417 TMPOP42166 694 aaKnown RBP11.72□□□□□ -0.53
LINC00520-204ENST00000556417 UTP14AQ9BVJ6 771 aaKnown RBP11.72□□□□□ -0.53
LINC00520-204ENST00000556417 PRDM10Q9NQV6 1147 aa11.72□□□□□ -0.53
LINC00520-204ENST00000556417 DDX21Q9NR30 783 aaKnown RBP eCLIP11.72□□□□□ -0.53
LINC00520-204ENST00000556417 WBP1LQ9NX94 342 aa11.72□□□□□ -0.53
LINC00520-204ENST00000556417 ATP6V0A2Q9Y487 856 aa11.72□□□□□ -0.53
LINC00520-204ENST00000556417 DLG5Q8TDM6 1919 aa11.71□□□□□ -0.53
LINC00520-204ENST00000556417 LMOD1P29536 600 aaPredicted RBP11.71□□□□□ -0.53
LINC00520-204ENST00000556417 FMR1Q06787 632 aaKnown RBP eCLIP11.71□□□□□ -0.53
LINC00520-204ENST00000556417 AOC3Q16853 763 aa11.71□□□□□ -0.53
LINC00520-204ENST00000556417 COPS6Q7L5N1 327 aa11.71□□□□□ -0.53
LINC00520-204ENST00000556417 RTFDC1Q9BY42 306 aaPredicted RBP11.71□□□□□ -0.53
LINC00520-204ENST00000556417 VPS33BQ9H267 617 aa11.71□□□□□ -0.53
LINC00520-204ENST00000556417 NUP98P52948 1817 aa11.71□□□□□ -0.54
LINC00520-204ENST00000556417 ABCC4O15439 1325 aa11.7□□□□□ -0.54
LINC00520-204ENST00000556417 LTBP1Q14766 1721 aa11.7□□□□□ -0.54
LINC00520-204ENST00000556417 PPIP5K2O43314 1243 aa11.7□□□□□ -0.54
LINC00520-204ENST00000556417 CTCFP49711 727 aaPredicted RBP11.7□□□□□ -0.54
LINC00520-204ENST00000556417 RALBP1Q15311 655 aa11.7□□□□□ -0.54
LINC00520-204ENST00000556417 USP50Q70EL3 339 aaPredicted RBP11.7□□□□□ -0.54
LINC00520-204ENST00000556417 NLRP10Q86W26 655 aa11.7□□□□□ -0.54
LINC00520-204ENST00000556417 NIM1KQ8IY84 436 aa11.7□□□□□ -0.54
LINC00520-204ENST00000556417 NECTIN2Q92692 538 aa11.7□□□□□ -0.54
LINC00520-204ENST00000556417 WDR33Q9C0J8 1336 aaKnown RBP11.69□□□□□ -0.54
LINC00520-204ENST00000556417 BBOX1O75936 387 aa11.69□□□□□ -0.54
LINC00520-204ENST00000556417 HCLS1P14317 486 aaPredicted RBP11.69□□□□□ -0.54
LINC00520-204ENST00000556417 CXCL9Q07325 125 aa11.69□□□□□ -0.54
LINC00520-204ENST00000556417 AIMP1Q12904 312 aaKnown RBP11.69□□□□□ -0.54
LINC00520-204ENST00000556417 TCIRG1Q13488 830 aa11.69□□□□□ -0.54
LINC00520-204ENST00000556417 KRT24Q2M2I5 525 aa11.69□□□□□ -0.54
LINC00520-204ENST00000556417 HSP90AB3PQ58FF7 597 aa11.69□□□□□ -0.54
LINC00520-204ENST00000556417 CST9Q5W186 159 aa11.69□□□□□ -0.54
LINC00520-204ENST00000556417 SP8Q8IXZ3 490 aa11.69□□□□□ -0.54
LINC00520-204ENST00000556417 XAGE3Q8WTP9 111 aa11.69□□□□□ -0.54
LINC00520-204ENST00000556417 AIDAQ96BJ3 306 aa11.69□□□□□ -0.54
LINC00520-204ENST00000556417 TMX4Q9H1E5 349 aaPredicted RBP11.69□□□□□ -0.54
LINC00520-204ENST00000556417 ABT1Q9ULW3 272 aaKnown RBP11.69□□□□□ -0.54
LINC00520-204ENST00000556417 TRAF5O00463 557 aa11.68□□□□□ -0.54
LINC00520-204ENST00000556417 CHL1O00533 1208 aa11.68□□□□□ -0.54
LINC00520-204ENST00000556417 LBX1P52954 281 aa11.68□□□□□ -0.54
LINC00520-204ENST00000556417 LMOD3Q0VAK6 560 aa11.68□□□□□ -0.54
LINC00520-204ENST00000556417 NEUROD2Q15784 382 aa11.68□□□□□ -0.54
LINC00520-204ENST00000556417 ADARB2Q9NS39 739 aaKnown RBP11.68□□□□□ -0.54
LINC00520-204ENST00000556417 GPRC5DQ9NZD1 345 aa11.68□□□□□ -0.54
LINC00520-204ENST00000556417 TRMT112Q9UI30 125 aaKnown RBP11.68□□□□□ -0.54
LINC00520-204ENST00000556417 ZNRF3Q9ULT6 936 aa11.68□□□□□ -0.54
LINC00520-204ENST00000556417 MAP2K1Q02750 393 aaPredicted RBP11.67□□□□□ -0.54
LINC00520-204ENST00000556417 DPP8Q6V1X1 898 aaPredicted RBP11.67□□□□□ -0.54
LINC00520-204ENST00000556417 CCDC146Q8IYE0 955 aa11.67□□□□□ -0.54
LINC00520-204ENST00000556417 MPNDQ8N594 471 aa11.67□□□□□ -0.54
LINC00520-204ENST00000556417 SUPT20HQ8NEM7 779 aa11.67□□□□□ -0.54
LINC00520-204ENST00000556417 TRIM35Q9UPQ4 493 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms