RNA–Protein interactions for RNA: ENST00000556251.1

RAD51B-223, Transcript of RAD51 paralog B, human

TSL 4

Gene RAD51B, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD51B-223	ENST00000556251	LRRC4B	Q9NT99	713 aa		7.3	□□□□□ -1.24
RAD51B-223	ENST00000556251	PPP1R1B	Q9UD71	204 aa	Predicted RBP	7.3	□□□□□ -1.24
RAD51B-223	ENST00000556251	CCNL1	Q9UK58	526 aa	Predicted RBP	7.3	□□□□□ -1.24
RAD51B-223	ENST00000556251	RREB1	Q92766	1687 aa		7.3	□□□□□ -1.24
RAD51B-223	ENST00000556251	KIF24	Q5T7B8	1368 aa		7.3	□□□□□ -1.24
RAD51B-223	ENST00000556251	HOXA2	O43364	376 aa		7.29	□□□□□ -1.24
RAD51B-223	ENST00000556251	LILRB3	O75022	631 aa		7.29	□□□□□ -1.24
RAD51B-223	ENST00000556251	PHKG2	P15735	406 aa		7.29	□□□□□ -1.24
RAD51B-223	ENST00000556251	IL13	P35225	146 aa		7.29	□□□□□ -1.24
RAD51B-223	ENST00000556251	SLC15A2	Q16348	729 aa		7.29	□□□□□ -1.24
RAD51B-223	ENST00000556251	QPCT	Q16769	361 aa		7.29	□□□□□ -1.24
RAD51B-223	ENST00000556251	PLEKHO1	Q53GL0	409 aa	Predicted RBP	7.29	□□□□□ -1.24
RAD51B-223	ENST00000556251	HOMEZ	Q8IX15	550 aa		7.29	□□□□□ -1.24
RAD51B-223	ENST00000556251	IFNL2	Q8IZJ0	200 aa		7.29	□□□□□ -1.24
RAD51B-223	ENST00000556251	TMOD3	Q9NYL9	352 aa		7.29	□□□□□ -1.24
RAD51B-223	ENST00000556251	PCDHB15	Q9Y5E8	787 aa		7.29	□□□□□ -1.24
RAD51B-223	ENST00000556251	PARD3	Q8TEW0	1356 aa		7.29	□□□□□ -1.24
RAD51B-223	ENST00000556251	IGSF1	Q8N6C5	1336 aa		7.28	□□□□□ -1.24
RAD51B-223	ENST00000556251	TRAK2	O60296	914 aa		7.28	□□□□□ -1.24
RAD51B-223	ENST00000556251	SLC4A3	P48751	1232 aa		7.28	□□□□□ -1.24
RAD51B-223	ENST00000556251	C1orf141	Q5JVX7	400 aa		7.28	□□□□□ -1.24
RAD51B-223	ENST00000556251	MSL1	Q68DK7	614 aa		7.28	□□□□□ -1.24
RAD51B-223	ENST00000556251	LAPTM4B	Q86VI4	370 aa		7.28	□□□□□ -1.24
RAD51B-223	ENST00000556251	SLF2	Q8IX21	1173 aa		7.28	□□□□□ -1.24
RAD51B-223	ENST00000556251	PIGB	Q92521	554 aa		7.28	□□□□□ -1.24
RAD51B-223	ENST00000556251	SNRK	Q9NRH2	765 aa		7.28	□□□□□ -1.24
RAD51B-223	ENST00000556251	TFCP2L1	Q9NZI6	479 aa		7.28	□□□□□ -1.24
RAD51B-223	ENST00000556251	BHMG1	C9JSJ3	638 aa	Predicted RBP	7.27	□□□□□ -1.25
RAD51B-223	ENST00000556251	RAD21	O60216	631 aa		7.27	□□□□□ -1.25
RAD51B-223	ENST00000556251	PPP2R1A	P30153	589 aa		7.27	□□□□□ -1.25
RAD51B-223	ENST00000556251	CABP4	P57796	275 aa		7.27	□□□□□ -1.25
RAD51B-223	ENST00000556251	PRPF38B	Q5VTL8	546 aa	Known RBP	7.27	□□□□□ -1.25
RAD51B-223	ENST00000556251	SAMD7	Q7Z3H4	446 aa		7.27	□□□□□ -1.25
RAD51B-223	ENST00000556251	FAM163A	Q96GL9	167 aa	Predicted RBP	7.27	□□□□□ -1.25
RAD51B-223	ENST00000556251	POM121	Q96HA1	1249 aa		7.27	□□□□□ -1.25
RAD51B-223	ENST00000556251	HS3ST6	Q96QI5	342 aa		7.27	□□□□□ -1.25
RAD51B-223	ENST00000556251	NBPF3	Q9H094	633 aa		7.27	□□□□□ -1.25
RAD51B-223	ENST00000556251	C1orf115	Q9H7X2	142 aa		7.27	□□□□□ -1.25
RAD51B-223	ENST00000556251	ASAP1	Q9ULH1	1129 aa		7.27	□□□□□ -1.25
RAD51B-223	ENST00000556251	PALLD	Q8WX93	1383 aa		7.27	□□□□□ -1.25
RAD51B-223	ENST00000556251	TOGARAM1	Q9Y4F4	1720 aa		7.27	□□□□□ -1.25
RAD51B-223	ENST00000556251	BCL9	O00512	1426 aa		7.27	□□□□□ -1.25
RAD51B-223	ENST00000556251	POTEB3	A0JP26	581 aa		7.26	□□□□□ -1.25
RAD51B-223	ENST00000556251	TK2	O00142	265 aa		7.26	□□□□□ -1.25
RAD51B-223	ENST00000556251	APBB1	O00213	710 aa		7.26	□□□□□ -1.25
RAD51B-223	ENST00000556251	U2AF1L5	P0DN76	240 aa	Predicted RBP	7.26	□□□□□ -1.25
RAD51B-223	ENST00000556251	FDX1	P10109	184 aa		7.26	□□□□□ -1.25
RAD51B-223	ENST00000556251	U2AF1	Q01081	240 aa	Known RBP eCLIP	7.26	□□□□□ -1.25
RAD51B-223	ENST00000556251	RTL5	Q5HYW3	569 aa	Predicted RBP	7.26	□□□□□ -1.25
RAD51B-223	ENST00000556251	POTEB	Q6S5H4	581 aa		7.26	□□□□□ -1.25
RAD51B-223	ENST00000556251	CFAP53	Q96M91	514 aa		7.26	□□□□□ -1.25
RAD51B-223	ENST00000556251	SPON1	Q9HCB6	807 aa		7.26	□□□□□ -1.25
RAD51B-223	ENST00000556251	SRCAP	Q6ZRS2	3230 aa		7.26	□□□□□ -1.25
RAD51B-223	ENST00000556251	PKD1L3	Q7Z443	1732 aa		7.25	□□□□□ -1.25
RAD51B-223	ENST00000556251	SENP3-EIF4A1	A0A087X0R7	540 aa		7.25	□□□□□ -1.25
RAD51B-223	ENST00000556251	PTCD1	O75127	700 aa	Known RBP	7.25	□□□□□ -1.25
RAD51B-223	ENST00000556251	PRKAR2B	P31323	418 aa		7.25	□□□□□ -1.25
RAD51B-223	ENST00000556251	ATP6V1A	P38606	617 aa		7.25	□□□□□ -1.25
RAD51B-223	ENST00000556251	SLC39A6	Q13433	755 aa		7.25	□□□□□ -1.25
RAD51B-223	ENST00000556251	MTHFSD	Q2M296	383 aa	Known RBP	7.25	□□□□□ -1.25
RAD51B-223	ENST00000556251	ZBTB3	Q9H5J0	574 aa		7.25	□□□□□ -1.25
RAD51B-223	ENST00000556251	LGR6	Q9HBX8	967 aa		7.25	□□□□□ -1.25
RAD51B-223	ENST00000556251	WWC3	Q9ULE0	1092 aa		7.25	□□□□□ -1.25
RAD51B-223	ENST00000556251	PCDHGC3	Q9UN70	934 aa		7.25	□□□□□ -1.25
RAD51B-223	ENST00000556251	COG6	Q9Y2V7	657 aa		7.25	□□□□□ -1.25
RAD51B-223	ENST00000556251	CFH	P08603	1231 aa		7.24	□□□□□ -1.25
RAD51B-223	ENST00000556251	GUCA2A	Q02747	115 aa		7.24	□□□□□ -1.25
RAD51B-223	ENST00000556251	AMOT	Q4VCS5	1084 aa		7.24	□□□□□ -1.25
RAD51B-223	ENST00000556251	SLC27A3	Q5K4L6	730 aa		7.24	□□□□□ -1.25
RAD51B-223	ENST00000556251	MTMR14	Q8NCE2	650 aa		7.24	□□□□□ -1.25
RAD51B-223	ENST00000556251	NFATC2IP	Q8NCF5	419 aa		7.24	□□□□□ -1.25
RAD51B-223	ENST00000556251	LINC00116	Q8NCU8	138 aa		7.24	□□□□□ -1.25
RAD51B-223	ENST00000556251	HLA-C	Q95604	372 aa		7.24	□□□□□ -1.25
RAD51B-223	ENST00000556251	ZFR	Q96KR1	1074 aa	Known RBP	7.24	□□□□□ -1.25
RAD51B-223	ENST00000556251	ATG3	Q9NT62	314 aa		7.24	□□□□□ -1.25
RAD51B-223	ENST00000556251	KDM6A	O15550	1401 aa	Predicted RBP	7.24	□□□□□ -1.25
RAD51B-223	ENST00000556251	NCAPD2	Q15021	1401 aa		7.24	□□□□□ -1.25
RAD51B-223	ENST00000556251	PNPLA7	Q6ZV29	1317 aa		7.24	□□□□□ -1.25
RAD51B-223	ENST00000556251	ITGB4	P16144	1822 aa		7.23	□□□□□ -1.25
RAD51B-223	ENST00000556251	LOC102724428	A0A0B4J2F2	783 aa		7.23	□□□□□ -1.25
RAD51B-223	ENST00000556251	RNMT	O43148	476 aa	Known RBP	7.23	□□□□□ -1.25
RAD51B-223	ENST00000556251	RNF40	O75150	1001 aa		7.23	□□□□□ -1.25
RAD51B-223	ENST00000556251	AP1G2	O75843	785 aa		7.23	□□□□□ -1.25
RAD51B-223	ENST00000556251	HSP90AB1	P08238	724 aa	Known RBP	7.23	□□□□□ -1.25
RAD51B-223	ENST00000556251	SIK1	P57059	783 aa		7.23	□□□□□ -1.25
RAD51B-223	ENST00000556251	FUT2	Q10981	343 aa		7.23	□□□□□ -1.25
RAD51B-223	ENST00000556251	ITPK1	Q13572	414 aa		7.23	□□□□□ -1.25
RAD51B-223	ENST00000556251	GRIPAP1	Q4V328	841 aa		7.23	□□□□□ -1.25
RAD51B-223	ENST00000556251	AMIGO3	Q86WK7	504 aa		7.23	□□□□□ -1.25
RAD51B-223	ENST00000556251	COL23A1	Q86Y22	540 aa	Predicted RBP	7.23	□□□□□ -1.25
RAD51B-223	ENST00000556251	MRPL50	Q8N5N7	158 aa	Known RBP	7.23	□□□□□ -1.25
RAD51B-223	ENST00000556251	SMARCC1	Q92922	1105 aa	Predicted RBP	7.23	□□□□□ -1.25
RAD51B-223	ENST00000556251	DCAF5	Q96JK2	942 aa		7.23	□□□□□ -1.25
RAD51B-223	ENST00000556251	PHACTR3	Q96KR7	559 aa		7.23	□□□□□ -1.25
RAD51B-223	ENST00000556251	NUDC	Q9Y266	331 aa		7.23	□□□□□ -1.25
RAD51B-223	ENST00000556251	COL3A1	P02461	1466 aa	Predicted RBP	7.23	□□□□□ -1.25
RAD51B-223	ENST00000556251	NPC1L1	Q9UHC9	1359 aa		7.22	□□□□□ -1.25
RAD51B-223	ENST00000556251	LSM11	P83369	360 aa	Known RBP eCLIP	7.22	□□□□□ -1.25
RAD51B-223	ENST00000556251	DCTN1	Q14203	1278 aa		7.22	□□□□□ -1.25
RAD51B-223	ENST00000556251	AKAP4	Q5JQC9	854 aa		7.22	□□□□□ -1.25

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