RNA–Protein interactions for RNA: ENST00000556238.5

DPF3-209, Transcript of double PHD fingers 3, human

TSL 2

Gene DPF3, Length 513 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DPF3-209	ENST00000556238	ZBTB3	Q9H5J0	574 aa		13.83	□□□□□ -0.2
DPF3-209	ENST00000556238	TSPYL4	Q9UJ04	414 aa		13.83	□□□□□ -0.2
DPF3-209	ENST00000556238	PASK	Q96RG2	1323 aa		13.83	□□□□□ -0.2
DPF3-209	ENST00000556238	ZNF541	Q9H0D2	1346 aa		13.83	□□□□□ -0.2
DPF3-209	ENST00000556238	NTSR2	O95665	410 aa		13.82	□□□□□ -0.2
DPF3-209	ENST00000556238	ITGBL1	O95965	494 aa	Predicted RBP	13.82	□□□□□ -0.2
DPF3-209	ENST00000556238	HSPA1A	P0DMV8	641 aa	Known RBP	13.82	□□□□□ -0.2
DPF3-209	ENST00000556238	HSPA1B	P0DMV9	641 aa	Known RBP	13.82	□□□□□ -0.2
DPF3-209	ENST00000556238	TMPO	P42166	694 aa	Known RBP	13.82	□□□□□ -0.2
DPF3-209	ENST00000556238	PARP10	Q53GL7	1025 aa		13.82	□□□□□ -0.2
DPF3-209	ENST00000556238	SLC10A5	Q5PT55	438 aa		13.82	□□□□□ -0.2
DPF3-209	ENST00000556238	PPP1R42	Q7Z4L9	355 aa		13.82	□□□□□ -0.2
DPF3-209	ENST00000556238	RPGR	Q92834	1020 aa	Known RBP	13.82	□□□□□ -0.2
DPF3-209	ENST00000556238	HACL1	Q9UJ83	578 aa		13.82	□□□□□ -0.2
DPF3-209	ENST00000556238	LMOD3	Q0VAK6	560 aa		13.81	□□□□□ -0.2
DPF3-209	ENST00000556238	PNMA8A	Q86V59	439 aa	Predicted RBP	13.81	□□□□□ -0.2
DPF3-209	ENST00000556238	GPC2	Q8N158	579 aa		13.81	□□□□□ -0.2
DPF3-209	ENST00000556238	JDP2	Q8WYK2	163 aa		13.81	□□□□□ -0.2
DPF3-209	ENST00000556238	RBM17	Q96I25	401 aa	Known RBP	13.81	□□□□□ -0.2
DPF3-209	ENST00000556238	EIF2S2	P20042	333 aa	Known RBP	13.8	□□□□□ -0.2
DPF3-209	ENST00000556238	EPHX2	P34913	555 aa		13.8	□□□□□ -0.2
DPF3-209	ENST00000556238	NLRP3	Q96P20	1036 aa		13.79	□□□□□ -0.2
DPF3-209	ENST00000556238	EIF6	P56537	245 aa	Known RBP	13.78	□□□□□ -0.2
DPF3-209	ENST00000556238	PROSER3	Q2NL68	480 aa		13.78	□□□□□ -0.2
DPF3-209	ENST00000556238	EAPP	Q56P03	285 aa	Predicted RBP	13.78	□□□□□ -0.2
DPF3-209	ENST00000556238	C3orf67	Q6ZVT6	689 aa		13.78	□□□□□ -0.2
DPF3-209	ENST00000556238	UTP14A	Q9BVJ6	771 aa	Known RBP	13.78	□□□□□ -0.2
DPF3-209	ENST00000556238	VPS33B	Q9H267	617 aa		13.78	□□□□□ -0.2
DPF3-209	ENST00000556238	MKRN1	Q9UHC7	482 aa	Known RBP	13.78	□□□□□ -0.2
DPF3-209	ENST00000556238	RNF123	Q5XPI4	1314 aa		13.78	□□□□□ -0.2
DPF3-209	ENST00000556238	CNTNAP1	P78357	1384 aa		13.78	□□□□□ -0.2
DPF3-209	ENST00000556238	ADAMTSL1	Q8N6G6	1762 aa		13.78	□□□□□ -0.2
DPF3-209	ENST00000556238	TMEM88B	A6NKF7	163 aa		13.77	□□□□□ -0.21
DPF3-209	ENST00000556238	CHL1	O00533	1208 aa		13.77	□□□□□ -0.21
DPF3-209	ENST00000556238	PPEF1	O14829	653 aa	Predicted RBP	13.77	□□□□□ -0.21
DPF3-209	ENST00000556238	HSP90AB3P	Q58FF7	597 aa		13.77	□□□□□ -0.21
DPF3-209	ENST00000556238	COPS6	Q7L5N1	327 aa		13.77	□□□□□ -0.21
DPF3-209	ENST00000556238	TNS4	Q8IZW8	715 aa		13.77	□□□□□ -0.21
DPF3-209	ENST00000556238	CNTROB	Q8N137	903 aa		13.77	□□□□□ -0.21
DPF3-209	ENST00000556238	CLEC11A	Q9Y240	323 aa		13.77	□□□□□ -0.21
DPF3-209	ENST00000556238	ATP6V0A2	Q9Y487	856 aa		13.77	□□□□□ -0.21
DPF3-209	ENST00000556238	COL4A5	P29400	1685 aa		13.76	□□□□□ -0.21
DPF3-209	ENST00000556238	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.76	□□□□□ -0.21
DPF3-209	ENST00000556238	ANXA1	P04083	346 aa		13.76	□□□□□ -0.21
DPF3-209	ENST00000556238	TCIRG1	Q13488	830 aa		13.76	□□□□□ -0.21
DPF3-209	ENST00000556238	NLRP10	Q86W26	655 aa		13.76	□□□□□ -0.21
DPF3-209	ENST00000556238	LARGE2	Q8N3Y3	721 aa		13.76	□□□□□ -0.21
DPF3-209	ENST00000556238	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.76	□□□□□ -0.21
DPF3-209	ENST00000556238	PCNT	O95613	3336 aa		13.75	□□□□□ -0.21
DPF3-209	ENST00000556238	BBOX1	O75936	387 aa		13.75	□□□□□ -0.21
DPF3-209	ENST00000556238	SCNN1D	P51172	638 aa		13.75	□□□□□ -0.21
DPF3-209	ENST00000556238	XAGE3	Q8WTP9	111 aa		13.75	□□□□□ -0.21
DPF3-209	ENST00000556238	RUNDC1	Q96C34	613 aa		13.75	□□□□□ -0.21
DPF3-209	ENST00000556238	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.75	□□□□□ -0.21
DPF3-209	ENST00000556238	TMX4	Q9H1E5	349 aa	Predicted RBP	13.75	□□□□□ -0.21
DPF3-209	ENST00000556238	TRIM35	Q9UPQ4	493 aa		13.75	□□□□□ -0.21
DPF3-209	ENST00000556238	DDX10	Q13206	875 aa	Known RBP	13.74	□□□□□ -0.21
DPF3-209	ENST00000556238	MAP1S	Q66K74	1059 aa	Predicted RBP	13.74	□□□□□ -0.21
DPF3-209	ENST00000556238	SLC51A	Q86UW1	340 aa		13.74	□□□□□ -0.21
DPF3-209	ENST00000556238	SP8	Q8IXZ3	490 aa		13.74	□□□□□ -0.21
DPF3-209	ENST00000556238	NIM1K	Q8IY84	436 aa		13.74	□□□□□ -0.21
DPF3-209	ENST00000556238	GJA3	Q9Y6H8	435 aa		13.74	□□□□□ -0.21
DPF3-209	ENST00000556238	ABCC4	O15439	1325 aa		13.73	□□□□□ -0.21
DPF3-209	ENST00000556238	RASSF10	A6NK89	507 aa		13.73	□□□□□ -0.21
DPF3-209	ENST00000556238	TCERG1	O14776	1098 aa	Known RBP	13.73	□□□□□ -0.21
DPF3-209	ENST00000556238	PPIP5K2	O43314	1243 aa		13.73	□□□□□ -0.21
DPF3-209	ENST00000556238	HOXB7	P09629	217 aa		13.73	□□□□□ -0.21
DPF3-209	ENST00000556238	LMOD1	P29536	600 aa	Predicted RBP	13.73	□□□□□ -0.21
DPF3-209	ENST00000556238	VEGFB	P49765	207 aa		13.73	□□□□□ -0.21
DPF3-209	ENST00000556238	AIMP1	Q12904	312 aa	Known RBP	13.73	□□□□□ -0.21
DPF3-209	ENST00000556238	NEUROD2	Q15784	382 aa		13.73	□□□□□ -0.21
DPF3-209	ENST00000556238	CCDC146	Q8IYE0	955 aa		13.73	□□□□□ -0.21
DPF3-209	ENST00000556238	SUPT20H	Q8NEM7	779 aa		13.73	□□□□□ -0.21
DPF3-209	ENST00000556238	NECTIN2	Q92692	538 aa		13.73	□□□□□ -0.21
DPF3-209	ENST00000556238	SH3TC1	Q8TE82	1336 aa		13.72	□□□□□ -0.21
DPF3-209	ENST00000556238	HCLS1	P14317	486 aa	Predicted RBP	13.72	□□□□□ -0.21
DPF3-209	ENST00000556238	EPS15	P42566	896 aa		13.72	□□□□□ -0.21
DPF3-209	ENST00000556238	KRT24	Q2M2I5	525 aa		13.72	□□□□□ -0.21
DPF3-209	ENST00000556238	USP50	Q70EL3	339 aa	Predicted RBP	13.72	□□□□□ -0.21
DPF3-209	ENST00000556238	TRMT112	Q9UI30	125 aa	Known RBP	13.72	□□□□□ -0.21
DPF3-209	ENST00000556238	ZNRF3	Q9ULT6	936 aa		13.72	□□□□□ -0.21
DPF3-209	ENST00000556238	LTBP1	Q14766	1721 aa		13.72	□□□□□ -0.21
DPF3-209	ENST00000556238	ANKRD36C	Q5JPF3	1778 aa		13.71	□□□□□ -0.21
DPF3-209	ENST00000556238	FOXN1	O15353	648 aa		13.71	□□□□□ -0.21
DPF3-209	ENST00000556238	CXCL9	Q07325	125 aa		13.71	□□□□□ -0.21
DPF3-209	ENST00000556238	WDR43	Q15061	677 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
DPF3-209	ENST00000556238	AOC3	Q16853	763 aa		13.71	□□□□□ -0.21
DPF3-209	ENST00000556238	DEFB115	Q30KQ5	88 aa		13.71	□□□□□ -0.21
DPF3-209	ENST00000556238	DDX46	Q7L014	1031 aa	Known RBP	13.71	□□□□□ -0.21
DPF3-209	ENST00000556238	PLBD2	Q8NHP8	589 aa		13.71	□□□□□ -0.21
DPF3-209	ENST00000556238	PRDM10	Q9NQV6	1147 aa		13.71	□□□□□ -0.21
DPF3-209	ENST00000556238	CHPF2	Q9P2E5	772 aa		13.71	□□□□□ -0.21
DPF3-209	ENST00000556238	ADAMTS8	Q9UP79	889 aa		13.71	□□□□□ -0.21
DPF3-209	ENST00000556238	KIAA2012	Q0VF49	1180 aa		13.7	□□□□□ -0.22
DPF3-209	ENST00000556238	GRAP	Q13588	217 aa		13.7	□□□□□ -0.22
DPF3-209	ENST00000556238	HDGFL1	Q5TGJ6	251 aa		13.7	□□□□□ -0.22
DPF3-209	ENST00000556238	DPP8	Q6V1X1	898 aa	Predicted RBP	13.7	□□□□□ -0.22
DPF3-209	ENST00000556238	ANKRD13D	Q6ZTN6	518 aa		13.7	□□□□□ -0.22
DPF3-209	ENST00000556238	TMC4	Q7Z404	712 aa		13.7	□□□□□ -0.22
DPF3-209	ENST00000556238	MPND	Q8N594	471 aa		13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 12 ms