RNA–Protein interactions for RNA: ENST00000555964.5

XRCC3-215, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-215ENST00000555964 HOXA10P31260 410 aaPredicted RBP22.33■■□□□ 1.17
XRCC3-215ENST00000555964 EIF6P56537 245 aaKnown RBP22.33■■□□□ 1.17
XRCC3-215ENST00000555964 OLFM4Q6UX06 510 aa22.33■■□□□ 1.17
XRCC3-215ENST00000555964 RBM17Q96I25 401 aaKnown RBP22.33■■□□□ 1.17
XRCC3-215ENST00000555964 TMX4Q9H1E5 349 aaPredicted RBP22.33■■□□□ 1.17
XRCC3-215ENST00000555964 MYL6BP14649 208 aa22.32■■□□□ 1.16
XRCC3-215ENST00000555964 PPP1R42Q7Z4L9 355 aa22.32■■□□□ 1.16
XRCC3-215ENST00000555964 SNED1Q8TER0 1413 aa22.31■■□□□ 1.16
XRCC3-215ENST00000555964 GPTP24298 496 aa22.31■■□□□ 1.16
XRCC3-215ENST00000555964 LMOD1P29536 600 aaPredicted RBP22.31■■□□□ 1.16
XRCC3-215ENST00000555964 PARP10Q53GL7 1025 aa22.31■■□□□ 1.16
XRCC3-215ENST00000555964 TTLL7Q6ZT98 887 aa22.31■■□□□ 1.16
XRCC3-215ENST00000555964 ZBTB3Q9H5J0 574 aa22.31■■□□□ 1.16
XRCC3-215ENST00000555964 RNF123Q5XPI4 1314 aa22.31■■□□□ 1.16
XRCC3-215ENST00000555964 CAPN15O75808 1086 aa22.3■■□□□ 1.16
XRCC3-215ENST00000555964 GIGYF2Q6Y7W6 1299 aaKnown RBP22.3■■□□□ 1.16
XRCC3-215ENST00000555964 AIDAQ96BJ3 306 aa22.3■■□□□ 1.16
XRCC3-215ENST00000555964 CRAMP1Q96RY5 1269 aa22.3■■□□□ 1.16
XRCC3-215ENST00000555964 TSPYL4Q9UJ04 414 aa22.3■■□□□ 1.16
XRCC3-215ENST00000555964 UBN2Q6ZU65 1347 aa22.3■■□□□ 1.16
XRCC3-215ENST00000555964 ITGBL1O95965 494 aaPredicted RBP22.29■■□□□ 1.16
XRCC3-215ENST00000555964 LMOD3Q0VAK6 560 aa22.29■■□□□ 1.16
XRCC3-215ENST00000555964 ZNF34Q8IZ26 560 aa22.29■■□□□ 1.16
XRCC3-215ENST00000555964 THUMPD2Q9BTF0 503 aaKnown RBP22.29■■□□□ 1.16
XRCC3-215ENST00000555964 BABAM1Q9NWV8 329 aa22.29■■□□□ 1.16
XRCC3-215ENST00000555964 PPEF1O14829 653 aaPredicted RBP22.28■■□□□ 1.16
XRCC3-215ENST00000555964 SUSD4Q5VX71 490 aa22.28■■□□□ 1.16
XRCC3-215ENST00000555964 LARGE2Q8N3Y3 721 aa22.28■■□□□ 1.16
XRCC3-215ENST00000555964 ANKRD36CQ5JPF3 1778 aa22.27■■□□□ 1.16
XRCC3-215ENST00000555964 NTSR2O95665 410 aa22.27■■□□□ 1.16
XRCC3-215ENST00000555964 NLRP3Q96P20 1036 aa22.27■■□□□ 1.16
XRCC3-215ENST00000555964 CNTROBQ8N137 903 aa22.26■■□□□ 1.15
XRCC3-215ENST00000555964 GJA3Q9Y6H8 435 aa22.26■■□□□ 1.15
XRCC3-215ENST00000555964 HSP90AB3PQ58FF7 597 aa22.25■■□□□ 1.15
XRCC3-215ENST00000555964 NIM1KQ8IY84 436 aa22.25■■□□□ 1.15
XRCC3-215ENST00000555964 UTP14AQ9BVJ6 771 aaKnown RBP22.25■■□□□ 1.15
XRCC3-215ENST00000555964 VPS33BQ9H267 617 aa22.25■■□□□ 1.15
XRCC3-215ENST00000555964 CTCFP49711 727 aaPredicted RBP22.24■■□□□ 1.15
XRCC3-215ENST00000555964 RIPK4P57078 832 aa22.24■■□□□ 1.15
XRCC3-215ENST00000555964 MAP1SQ66K74 1059 aaPredicted RBP22.24■■□□□ 1.15
XRCC3-215ENST00000555964 PRDM10Q9NQV6 1147 aa22.24■■□□□ 1.15
XRCC3-215ENST00000555964 TRPM7Q96QT4 1865 aa22.24■■□□□ 1.15
XRCC3-215ENST00000555964 EIF2S2P20042 333 aaKnown RBP22.23■■□□□ 1.15
XRCC3-215ENST00000555964 VEGFBP49765 207 aa22.23■■□□□ 1.15
XRCC3-215ENST00000555964 RALBP1Q15311 655 aa22.23■■□□□ 1.15
XRCC3-215ENST00000555964 SUPT20HQ8NEM7 779 aa22.23■■□□□ 1.15
XRCC3-215ENST00000555964 RASSF10A6NK89 507 aa22.22■■□□□ 1.15
XRCC3-215ENST00000555964 PPIP5K2O43314 1243 aa22.22■■□□□ 1.15
XRCC3-215ENST00000555964 COL4A5P29400 1685 aa22.21■■□□□ 1.15
XRCC3-215ENST00000555964 FOXN1O15353 648 aa22.21■■□□□ 1.15
XRCC3-215ENST00000555964 DEFB115Q30KQ5 88 aa22.21■■□□□ 1.15
XRCC3-215ENST00000555964 SLC10A5Q5PT55 438 aa22.21■■□□□ 1.15
XRCC3-215ENST00000555964 USP50Q70EL3 339 aaPredicted RBP22.21■■□□□ 1.15
XRCC3-215ENST00000555964 ABT1Q9ULW3 272 aaKnown RBP22.21■■□□□ 1.15
XRCC3-215ENST00000555964 ATP6V0A2Q9Y487 856 aa22.21■■□□□ 1.15
XRCC3-215ENST00000555964 LTBP1Q14766 1721 aa22.2■■□□□ 1.14
XRCC3-215ENST00000555964 LAMB2P55268 1798 aa22.2■■□□□ 1.14
XRCC3-215ENST00000555964 TCERG1O14776 1098 aaKnown RBP22.19■■□□□ 1.14
XRCC3-215ENST00000555964 SCNN1DP51172 638 aa22.19■■□□□ 1.14
XRCC3-215ENST00000555964 LRP10Q7Z4F1 713 aa22.19■■□□□ 1.14
XRCC3-215ENST00000555964 DDX21Q9NR30 783 aaKnown RBP eCLIP22.19■■□□□ 1.14
XRCC3-215ENST00000555964 ABCC4O15439 1325 aa22.18■■□□□ 1.14
XRCC3-215ENST00000555964 BBOX1O75936 387 aa22.18■■□□□ 1.14
XRCC3-215ENST00000555964 TMPOP42166 694 aaKnown RBP22.18■■□□□ 1.14
XRCC3-215ENST00000555964 MAP2K1Q02750 393 aaPredicted RBP22.18■■□□□ 1.14
XRCC3-215ENST00000555964 PDIA6Q15084 440 aa22.18■■□□□ 1.14
XRCC3-215ENST00000555964 WBP1LQ9NX94 342 aa22.18■■□□□ 1.14
XRCC3-215ENST00000555964 C3orf67Q6ZVT6 689 aa22.17■■□□□ 1.14
XRCC3-215ENST00000555964 CDHR2Q9BYE9 1310 aa22.16■■□□□ 1.14
XRCC3-215ENST00000555964 ECE1P42892 770 aa22.16■■□□□ 1.14
XRCC3-215ENST00000555964 AOC3Q16853 763 aa22.16■■□□□ 1.14
XRCC3-215ENST00000555964 DDX46Q7L014 1031 aaKnown RBP22.16■■□□□ 1.14
XRCC3-215ENST00000555964 TMC4Q7Z404 712 aa22.16■■□□□ 1.14
XRCC3-215ENST00000555964 RTFDC1Q9BY42 306 aaPredicted RBP22.16■■□□□ 1.14
XRCC3-215ENST00000555964 ADARB2Q9NS39 739 aaKnown RBP22.16■■□□□ 1.14
XRCC3-215ENST00000555964 ZNRF3Q9ULT6 936 aa22.16■■□□□ 1.14
XRCC3-215ENST00000555964 SH3TC1Q8TE82 1336 aa22.15■■□□□ 1.14
XRCC3-215ENST00000555964 WDR33Q9C0J8 1336 aaKnown RBP22.15■■□□□ 1.14
XRCC3-215ENST00000555964 EPS15P42566 896 aa22.15■■□□□ 1.14
XRCC3-215ENST00000555964 PROSER3Q2NL68 480 aa22.15■■□□□ 1.14
XRCC3-215ENST00000555964 DPP8Q6V1X1 898 aaPredicted RBP22.15■■□□□ 1.14
XRCC3-215ENST00000555964 COPS6Q7L5N1 327 aa22.15■■□□□ 1.14
XRCC3-215ENST00000555964 SP8Q8IXZ3 490 aa22.15■■□□□ 1.14
XRCC3-215ENST00000555964 THSD7BQ9C0I4 1608 aa22.14■■□□□ 1.14
XRCC3-215ENST00000555964 NLRP10Q86W26 655 aa22.14■■□□□ 1.13
XRCC3-215ENST00000555964 XAGE3Q8WTP9 111 aa22.14■■□□□ 1.13
XRCC3-215ENST00000555964 GPRC5DQ9NZD1 345 aa22.14■■□□□ 1.13
XRCC3-215ENST00000555964 TRMT112Q9UI30 125 aaKnown RBP22.14■■□□□ 1.13
XRCC3-215ENST00000555964 ANXA1P04083 346 aa22.13■■□□□ 1.13
XRCC3-215ENST00000555964 AIMP1Q12904 312 aaKnown RBP22.13■■□□□ 1.13
XRCC3-215ENST00000555964 TCIRG1Q13488 830 aa22.13■■□□□ 1.13
XRCC3-215ENST00000555964 MPNDQ8N594 471 aa22.13■■□□□ 1.13
XRCC3-215ENST00000555964 BEGAINQ9BUH8 593 aa22.13■■□□□ 1.13
XRCC3-215ENST00000555964 MYBBP1AQ9BQG0 1328 aaKnown RBP22.12■■□□□ 1.13
XRCC3-215ENST00000555964 HOXB7P09629 217 aa22.12■■□□□ 1.13
XRCC3-215ENST00000555964 GRAPQ13588 217 aa22.12■■□□□ 1.13
XRCC3-215ENST00000555964 PAXIP1Q6ZW49 1069 aaPredicted RBP22.12■■□□□ 1.13
XRCC3-215ENST00000555964 GRAPLQ8TC17 118 aaPredicted RBP22.12■■□□□ 1.13
XRCC3-215ENST00000555964 HCLS1P14317 486 aaPredicted RBP22.11■■□□□ 1.13
XRCC3-215ENST00000555964 KIAA2012Q0VF49 1180 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms