RNA–Protein interactions for RNA: ENST00000555914.5

HNRNPC-222, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HNRNPC, Length 1,658 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-222ENST00000555914 PDIA6Q15084 440 aa11.67□□□□□ -0.54
HNRNPC-222ENST00000555914 LRP10Q7Z4F1 713 aa11.67□□□□□ -0.54
HNRNPC-222ENST00000555914 ZNF277Q9NRM2 450 aaPredicted RBP11.67□□□□□ -0.54
HNRNPC-222ENST00000555914 TSPYL4Q9UJ04 414 aa11.67□□□□□ -0.54
HNRNPC-222ENST00000555914 EIF2S2P20042 333 aaKnown RBP11.66□□□□□ -0.54
HNRNPC-222ENST00000555914 TMPOP42166 694 aaKnown RBP11.66□□□□□ -0.54
HNRNPC-222ENST00000555914 PROSER3Q2NL68 480 aa11.66□□□□□ -0.54
HNRNPC-222ENST00000555914 CRY2Q49AN0 593 aa11.66□□□□□ -0.54
HNRNPC-222ENST00000555914 CCDC93Q567U6 631 aa11.66□□□□□ -0.54
HNRNPC-222ENST00000555914 SOGA3Q5TF21 947 aa11.66□□□□□ -0.54
HNRNPC-222ENST00000555914 SUSD4Q5VX71 490 aa11.66□□□□□ -0.54
HNRNPC-222ENST00000555914 CCDC146Q8IYE0 955 aa11.66□□□□□ -0.54
HNRNPC-222ENST00000555914 PNNQ9H307 717 aaKnown RBP11.66□□□□□ -0.54
HNRNPC-222ENST00000555914 FKBP4Q02790 459 aaKnown RBP eCLIP11.65□□□□□ -0.54
HNRNPC-222ENST00000555914 NEUROD2Q15784 382 aa11.65□□□□□ -0.54
HNRNPC-222ENST00000555914 KIF6Q6ZMV9 814 aa11.65□□□□□ -0.54
HNRNPC-222ENST00000555914 C3orf67Q6ZVT6 689 aa11.65□□□□□ -0.54
HNRNPC-222ENST00000555914 ZNF34Q8IZ26 560 aa11.65□□□□□ -0.54
HNRNPC-222ENST00000555914 JMYQ8N9B5 988 aa11.65□□□□□ -0.54
HNRNPC-222ENST00000555914 MYBBP1AQ9BQG0 1328 aaKnown RBP11.65□□□□□ -0.54
HNRNPC-222ENST00000555914 SNED1Q8TER0 1413 aa11.65□□□□□ -0.54
HNRNPC-222ENST00000555914 ALDH1B1P30837 517 aa11.65□□□□□ -0.55
HNRNPC-222ENST00000555914 IRX6P78412 446 aaPredicted RBP11.65□□□□□ -0.55
HNRNPC-222ENST00000555914 KRT24Q2M2I5 525 aa11.65□□□□□ -0.55
HNRNPC-222ENST00000555914 NECTIN2Q92692 538 aa11.65□□□□□ -0.55
HNRNPC-222ENST00000555914 ZNF541Q9H0D2 1346 aa11.65□□□□□ -0.55
HNRNPC-222ENST00000555914 NTSR2O95665 410 aa11.64□□□□□ -0.55
HNRNPC-222ENST00000555914 GIGYF2Q6Y7W6 1299 aaKnown RBP11.64□□□□□ -0.55
HNRNPC-222ENST00000555914 NYXQ9GZU5 481 aa11.64□□□□□ -0.55
HNRNPC-222ENST00000555914 TCERG1O14776 1098 aaKnown RBP11.63□□□□□ -0.55
HNRNPC-222ENST00000555914 SYNE4Q8N205 404 aa11.63□□□□□ -0.55
HNRNPC-222ENST00000555914 COL4A5P29400 1685 aa11.63□□□□□ -0.55
HNRNPC-222ENST00000555914 RTKN2Q8IZC4 609 aa11.62□□□□□ -0.55
HNRNPC-222ENST00000555914 ZNF428Q96B54 188 aa11.62□□□□□ -0.55
HNRNPC-222ENST00000555914 L3MBTL3Q96JM7 780 aaPredicted RBP11.62□□□□□ -0.55
HNRNPC-222ENST00000555914 TRIM35Q9UPQ4 493 aa11.62□□□□□ -0.55
HNRNPC-222ENST00000555914 ERBB4Q15303 1308 aa11.62□□□□□ -0.55
HNRNPC-222ENST00000555914 HOXA10P31260 410 aaPredicted RBP11.62□□□□□ -0.55
HNRNPC-222ENST00000555914 IARSP41252 1262 aaKnown RBP11.62□□□□□ -0.55
HNRNPC-222ENST00000555914 AIMP1Q12904 312 aaKnown RBP11.62□□□□□ -0.55
HNRNPC-222ENST00000555914 COL13A1Q5TAT6 717 aaPredicted RBP11.62□□□□□ -0.55
HNRNPC-222ENST00000555914 CHADLQ6NUI6 762 aa11.62□□□□□ -0.55
HNRNPC-222ENST00000555914 TAF1DQ9H5J8 278 aaPredicted RBP11.62□□□□□ -0.55
HNRNPC-222ENST00000555914 SCN4AP35499 1836 aa11.61□□□□□ -0.55
HNRNPC-222ENST00000555914 FZD9O00144 591 aa11.61□□□□□ -0.55
HNRNPC-222ENST00000555914 COPS6Q7L5N1 327 aa11.61□□□□□ -0.55
HNRNPC-222ENST00000555914 RPGRQ92834 1020 aaKnown RBP11.61□□□□□ -0.55
HNRNPC-222ENST00000555914 PSMD1Q99460 953 aa11.61□□□□□ -0.55
HNRNPC-222ENST00000555914 ADAMTS8Q9UP79 889 aa11.61□□□□□ -0.55
HNRNPC-222ENST00000555914 LAS1LQ9Y4W2 734 aaKnown RBP11.61□□□□□ -0.55
HNRNPC-222ENST00000555914 RIC1Q4ADV7 1423 aa11.61□□□□□ -0.55
HNRNPC-222ENST00000555914 IBTKQ9P2D0 1353 aaPredicted RBP11.6□□□□□ -0.55
HNRNPC-222ENST00000555914 CHL1O00533 1208 aa11.6□□□□□ -0.55
HNRNPC-222ENST00000555914 XAGE3Q8WTP9 111 aa11.6□□□□□ -0.55
HNRNPC-222ENST00000555914 BABAM1Q9NWV8 329 aa11.6□□□□□ -0.55
HNRNPC-222ENST00000555914 IQCA1LA6NCM1 817 aa11.59□□□□□ -0.55
HNRNPC-222ENST00000555914 LMOD3Q0VAK6 560 aa11.59□□□□□ -0.55
HNRNPC-222ENST00000555914 EAPPQ56P03 285 aaPredicted RBP11.59□□□□□ -0.55
HNRNPC-222ENST00000555914 PPP1R42Q7Z4L9 355 aa11.59□□□□□ -0.55
HNRNPC-222ENST00000555914 RUNDC1Q96C34 613 aa11.59□□□□□ -0.55
HNRNPC-222ENST00000555914 PPEF1O14829 653 aaPredicted RBP11.59□□□□□ -0.55
HNRNPC-222ENST00000555914 PARP10Q53GL7 1025 aa11.59□□□□□ -0.55
HNRNPC-222ENST00000555914 RBM17Q96I25 401 aaKnown RBP11.59□□□□□ -0.55
HNRNPC-222ENST00000555914 CRAMP1Q96RY5 1269 aa11.59□□□□□ -0.55
HNRNPC-222ENST00000555914 UTP14AQ9BVJ6 771 aaKnown RBP11.59□□□□□ -0.55
HNRNPC-222ENST00000555914 CHPF2Q9P2E5 772 aa11.59□□□□□ -0.55
HNRNPC-222ENST00000555914 MKRN1Q9UHC7 482 aaKnown RBP11.59□□□□□ -0.55
HNRNPC-222ENST00000555914 TAF1P21675 1872 aa11.58□□□□□ -0.56
HNRNPC-222ENST00000555914 ANKRD36CQ5JPF3 1778 aa11.58□□□□□ -0.56
HNRNPC-222ENST00000555914 PASKQ96RG2 1323 aa11.58□□□□□ -0.56
HNRNPC-222ENST00000555914 LTBP1Q14766 1721 aa11.58□□□□□ -0.56
HNRNPC-222ENST00000555914 ITGBL1O95965 494 aaPredicted RBP11.58□□□□□ -0.56
HNRNPC-222ENST00000555914 HCLS1P14317 486 aaPredicted RBP11.58□□□□□ -0.56
HNRNPC-222ENST00000555914 EPHX2P34913 555 aa11.58□□□□□ -0.56
HNRNPC-222ENST00000555914 NLRP10Q86W26 655 aa11.58□□□□□ -0.56
HNRNPC-222ENST00000555914 LDHDQ86WU2 507 aa11.58□□□□□ -0.56
HNRNPC-222ENST00000555914 JDP2Q8WYK2 163 aa11.58□□□□□ -0.56
HNRNPC-222ENST00000555914 NLRP3Q96P20 1036 aa11.58□□□□□ -0.56
HNRNPC-222ENST00000555914 CREBZFQ9NS37 354 aa11.58□□□□□ -0.56
HNRNPC-222ENST00000555914 HACL1Q9UJ83 578 aa11.58□□□□□ -0.56
HNRNPC-222ENST00000555914 LAMB2P55268 1798 aa11.58□□□□□ -0.56
HNRNPC-222ENST00000555914 ADAMTSL1Q8N6G6 1762 aa11.58□□□□□ -0.56
HNRNPC-222ENST00000555914 ABCC4O15439 1325 aa11.57□□□□□ -0.56
HNRNPC-222ENST00000555914 HSPA1AP0DMV8 641 aaKnown RBP11.57□□□□□ -0.56
HNRNPC-222ENST00000555914 HSPA1BP0DMV9 641 aaKnown RBP11.57□□□□□ -0.56
HNRNPC-222ENST00000555914 WDR43Q15061 677 aaKnown RBP eCLIP11.57□□□□□ -0.56
HNRNPC-222ENST00000555914 SLC10A5Q5PT55 438 aa11.57□□□□□ -0.56
HNRNPC-222ENST00000555914 GPC2Q8N158 579 aa11.57□□□□□ -0.56
HNRNPC-222ENST00000555914 DDX21Q9NR30 783 aaKnown RBP eCLIP11.57□□□□□ -0.56
HNRNPC-222ENST00000555914 GJA3Q9Y6H8 435 aa11.57□□□□□ -0.56
HNRNPC-222ENST00000555914 TCIRG1Q13488 830 aa11.56□□□□□ -0.56
HNRNPC-222ENST00000555914 MAP1SQ66K74 1059 aaPredicted RBP11.56□□□□□ -0.56
HNRNPC-222ENST00000555914 CC2D2BQ6DHV5 1058 aa11.56□□□□□ -0.56
HNRNPC-222ENST00000555914 B4GALNT3Q6L9W6 998 aa11.56□□□□□ -0.56
HNRNPC-222ENST00000555914 LARGE2Q8N3Y3 721 aa11.56□□□□□ -0.56
HNRNPC-222ENST00000555914 CLEC11AQ9Y240 323 aa11.56□□□□□ -0.56
HNRNPC-222ENST00000555914 SCNN1DP51172 638 aa11.55□□□□□ -0.56
HNRNPC-222ENST00000555914 AOC3Q16853 763 aa11.55□□□□□ -0.56
HNRNPC-222ENST00000555914 HDGFL1Q5TGJ6 251 aa11.55□□□□□ -0.56
HNRNPC-222ENST00000555914 TRMT112Q9UI30 125 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms