RNA–Protein interactions for RNA: ENST00000555503.1

GPHN-208, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 655 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-208ENST00000555503 NBPF6Q5VWK0 638 aa9.68□□□□□ -0.86
GPHN-208ENST00000555503 MSL1Q68DK7 614 aa9.68□□□□□ -0.86
GPHN-208ENST00000555503 NUDT18Q6ZVK8 323 aa9.68□□□□□ -0.86
GPHN-208ENST00000555503 NBPF4Q96M43 638 aa9.68□□□□□ -0.86
GPHN-208ENST00000555503 CCNL1Q9UK58 526 aaPredicted RBP9.68□□□□□ -0.86
GPHN-208ENST00000555503 C4AP0C0L4 1744 aa9.68□□□□□ -0.86
GPHN-208ENST00000555503 COL5A3P25940 1745 aaPredicted RBP9.68□□□□□ -0.86
GPHN-208ENST00000555503 KDM4AO75164 1064 aa9.67□□□□□ -0.86
GPHN-208ENST00000555503 USP46P62068 366 aa9.67□□□□□ -0.86
GPHN-208ENST00000555503 FOXD4L5Q5VV16 416 aaPredicted RBP9.67□□□□□ -0.86
GPHN-208ENST00000555503 FOXD4L4Q8WXT5 416 aaPredicted RBP9.67□□□□□ -0.86
GPHN-208ENST00000555503 PUS7Q96PZ0 661 aaKnown RBP9.67□□□□□ -0.86
GPHN-208ENST00000555503 PPP1R12CQ9BZL4 782 aa9.67□□□□□ -0.86
GPHN-208ENST00000555503 BRCA1P38398 1863 aaKnown RBP9.67□□□□□ -0.86
GPHN-208ENST00000555503 KIF13BQ9NQT8 1826 aa9.67□□□□□ -0.86
GPHN-208ENST00000555503 KIAA1551Q9HCM1 1747 aa9.66□□□□□ -0.86
GPHN-208ENST00000555503 SENP3-EIF4A1A0A087X0R7 540 aa9.66□□□□□ -0.86
GPHN-208ENST00000555503 PPP1R3GB7ZBB8 358 aa9.66□□□□□ -0.86
GPHN-208ENST00000555503 FYB1O15117 783 aa9.66□□□□□ -0.86
GPHN-208ENST00000555503 RFX1P22670 979 aa9.66□□□□□ -0.86
GPHN-208ENST00000555503 HSP90AB2PQ58FF8 381 aa9.66□□□□□ -0.86
GPHN-208ENST00000555503 RAPGEF4Q8WZA2 1011 aa9.66□□□□□ -0.86
GPHN-208ENST00000555503 TRIM34Q9BYJ4 488 aa9.66□□□□□ -0.86
GPHN-208ENST00000555503 MYH14Q7Z406 1995 aaKnown RBP9.66□□□□□ -0.86
GPHN-208ENST00000555503 NSD3Q9BZ95 1437 aa9.65□□□□□ -0.86
GPHN-208ENST00000555503 HOXA2O43364 376 aa9.65□□□□□ -0.86
GPHN-208ENST00000555503 TATP17735 454 aaPredicted RBP9.65□□□□□ -0.86
GPHN-208ENST00000555503 TMF1P82094 1093 aa9.65□□□□□ -0.86
GPHN-208ENST00000555503 COL23A1Q86Y22 540 aaPredicted RBP9.65□□□□□ -0.86
GPHN-208ENST00000555503 SLC16A10Q8TF71 515 aa9.65□□□□□ -0.86
GPHN-208ENST00000555503 KHSRPQ92945 711 aaKnown RBP eCLIP9.65□□□□□ -0.86
GPHN-208ENST00000555503 TATDN2Q93075 761 aa9.65□□□□□ -0.86
GPHN-208ENST00000555503 BCL2L12Q9HB09 334 aa9.65□□□□□ -0.86
GPHN-208ENST00000555503 HMX1Q9NP08 348 aaPredicted RBP9.65□□□□□ -0.86
GPHN-208ENST00000555503 INSRP06213 1382 aa9.64□□□□□ -0.87
GPHN-208ENST00000555503 FLT4P35916 1363 aa9.64□□□□□ -0.87
GPHN-208ENST00000555503 CCDC88AQ3V6T2 1871 aa9.64□□□□□ -0.87
GPHN-208ENST00000555503 PCDH11XQ9BZA7 1347 aa9.64□□□□□ -0.87
GPHN-208ENST00000555503 PCDH11YQ9BZA8 1340 aa9.64□□□□□ -0.87
GPHN-208ENST00000555503 YBX3P16989 372 aaKnown RBP eCLIP9.64□□□□□ -0.87
GPHN-208ENST00000555503 MPRIPQ6WCQ1 1025 aa9.64□□□□□ -0.87
GPHN-208ENST00000555503 SMIM5Q71RC9 77 aa9.64□□□□□ -0.87
GPHN-208ENST00000555503 RDH13Q8NBN7 331 aa9.64□□□□□ -0.87
GPHN-208ENST00000555503 PNMA3Q9UL41 463 aa9.64□□□□□ -0.87
GPHN-208ENST00000555503 PALLDQ8WX93 1383 aa9.63□□□□□ -0.87
GPHN-208ENST00000555503 SCN11AQ9UI33 1791 aa9.63□□□□□ -0.87
GPHN-208ENST00000555503 PPM1GO15355 546 aaPredicted RBP9.63□□□□□ -0.87
GPHN-208ENST00000555503 FDX1P10109 184 aa9.63□□□□□ -0.87
GPHN-208ENST00000555503 C1QTNF8P60827 252 aa9.63□□□□□ -0.87
GPHN-208ENST00000555503 ARSIQ5FYB1 569 aa9.63□□□□□ -0.87
GPHN-208ENST00000555503 ALG2Q9H553 416 aa9.63□□□□□ -0.87
GPHN-208ENST00000555503 ZSWIM6Q9HCJ5 1215 aa9.63□□□□□ -0.87
GPHN-208ENST00000555503 WWC3Q9ULE0 1092 aa9.63□□□□□ -0.87
GPHN-208ENST00000555503 EMILIN1Q9Y6C2 1016 aa9.63□□□□□ -0.87
GPHN-208ENST00000555503 CGNL1Q0VF96 1302 aa9.62□□□□□ -0.87
GPHN-208ENST00000555503 ARFGEF1Q9Y6D6 1849 aa9.62□□□□□ -0.87
GPHN-208ENST00000555503 TRIM6-TRIM34B2RNG4 842 aa9.62□□□□□ -0.87
GPHN-208ENST00000555503 CYP27B1O15528 508 aa9.62□□□□□ -0.87
GPHN-208ENST00000555503 GCGRP47871 477 aa9.62□□□□□ -0.87
GPHN-208ENST00000555503 CTDSPL2Q05D32 466 aa9.62□□□□□ -0.87
GPHN-208ENST00000555503 VAC14Q08AM6 782 aa9.62□□□□□ -0.87
GPHN-208ENST00000555503 DOK7Q18PE1 504 aa9.62□□□□□ -0.87
GPHN-208ENST00000555503 PPP4R3BQ5MIZ7 849 aa9.62□□□□□ -0.87
GPHN-208ENST00000555503 CACNA1SQ13698 1873 aa9.62□□□□□ -0.87
GPHN-208ENST00000555503 ZNF831Q5JPB2 1677 aa9.61□□□□□ -0.87
GPHN-208ENST00000555503 PALM3A6NDB9 673 aaPredicted RBP9.61□□□□□ -0.87
GPHN-208ENST00000555503 GIGYF1O75420 1035 aaPredicted RBP9.61□□□□□ -0.87
GPHN-208ENST00000555503 RBM25P49756 843 aaKnown RBP9.61□□□□□ -0.87
GPHN-208ENST00000555503 GPR153Q6NV75 609 aa9.61□□□□□ -0.87
GPHN-208ENST00000555503 PACS2Q86VP3 889 aa9.61□□□□□ -0.87
GPHN-208ENST00000555503 AMIGO3Q86WK7 504 aa9.61□□□□□ -0.87
GPHN-208ENST00000555503 CARD14Q9BXL6 1004 aa9.61□□□□□ -0.87
GPHN-208ENST00000555503 PCDHGC3Q9UN70 934 aa9.61□□□□□ -0.87
GPHN-208ENST00000555503 SBF1O95248 1867 aa9.6□□□□□ -0.87
GPHN-208ENST00000555503 TJP1Q07157 1748 aa9.6□□□□□ -0.87
GPHN-208ENST00000555503 HOXB3P14651 431 aaPredicted RBP9.6□□□□□ -0.87
GPHN-208ENST00000555503 PTPREP23469 700 aa9.6□□□□□ -0.87
GPHN-208ENST00000555503 ZNF428Q96B54 188 aa9.6□□□□□ -0.87
GPHN-208ENST00000555503 POLR3GLQ9BT43 218 aa9.6□□□□□ -0.87
GPHN-208ENST00000555503 AFDNP55196 1824 aaKnown RBP9.6□□□□□ -0.87
GPHN-208ENST00000555503 CICQ96RK0 1608 aaPredicted RBP9.6□□□□□ -0.87
GPHN-208ENST00000555503 NCAPD2Q15021 1401 aa9.59□□□□□ -0.87
GPHN-208ENST00000555503 ATP10DQ9P241 1426 aa9.59□□□□□ -0.87
GPHN-208ENST00000555503 SOX11P35716 441 aa9.59□□□□□ -0.87
GPHN-208ENST00000555503 TNNT2P45379 298 aaPredicted RBP9.59□□□□□ -0.87
GPHN-208ENST00000555503 HELBQ8NG08 1087 aaPredicted RBP9.59□□□□□ -0.87
GPHN-208ENST00000555503 UCN2Q96RP3 112 aa9.59□□□□□ -0.87
GPHN-208ENST00000555503 LHX6Q9UPM6 363 aa9.59□□□□□ -0.87
GPHN-208ENST00000555503 KIF24Q5T7B8 1368 aa9.59□□□□□ -0.87
GPHN-208ENST00000555503 RIMBP2O15034 1052 aa9.58□□□□□ -0.88
GPHN-208ENST00000555503 ATG7O95352 703 aa9.58□□□□□ -0.88
GPHN-208ENST00000555503 MTMR2Q13614 643 aa9.58□□□□□ -0.88
GPHN-208ENST00000555503 ZNF526Q8TF50 670 aaPredicted RBP9.58□□□□□ -0.88
GPHN-208ENST00000555503 PIGBQ92521 554 aa9.58□□□□□ -0.88
GPHN-208ENST00000555503 CARNS1A5YM72 827 aa9.57□□□□□ -0.88
GPHN-208ENST00000555503 GRIN3BO60391 1043 aa9.57□□□□□ -0.88
GPHN-208ENST00000555503 LMOD1P29536 600 aaPredicted RBP9.57□□□□□ -0.88
GPHN-208ENST00000555503 CDCA8Q53HL2 280 aa9.57□□□□□ -0.88
GPHN-208ENST00000555503 LINC00116Q8NCU8 138 aa9.57□□□□□ -0.88
GPHN-208ENST00000555503 LRRN4Q8WUT4 740 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms