RNA–Protein interactions for RNA: ENST00000555172.5

KTN1-220, Transcript of kinectin 1, humanhuman

TSL 2

Gene KTN1, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-220ENST00000555172 CHSY3Q70JA7 882 aa5.49□□□□□ -1.53
KTN1-220ENST00000555172 CLP1Q92989 425 aaKnown RBP5.49□□□□□ -1.53
KTN1-220ENST00000555172 TRIM11Q96F44 468 aa5.49□□□□□ -1.53
KTN1-220ENST00000555172 ZNF594Q96JF6 807 aaPredicted RBP5.49□□□□□ -1.53
KTN1-220ENST00000555172 ZFP64Q9NPA5 681 aa5.49□□□□□ -1.53
KTN1-220ENST00000555172 ATXN7L1Q9ULK2 861 aaPredicted RBP5.49□□□□□ -1.53
KTN1-220ENST00000555172 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.49□□□□□ -1.53
KTN1-220ENST00000555172 SWI5Q1ZZU3 235 aa5.48□□□□□ -1.53
KTN1-220ENST00000555172 RSPO4Q2I0M5 234 aaPredicted RBP5.48□□□□□ -1.53
KTN1-220ENST00000555172 PGBD3Q8N328 593 aa5.48□□□□□ -1.53
KTN1-220ENST00000555172 SSFA2P28290 1259 aa5.47□□□□□ -1.53
KTN1-220ENST00000555172 SERPINB4P48594 390 aa5.47□□□□□ -1.53
KTN1-220ENST00000555172 USP4Q13107 963 aa5.47□□□□□ -1.53
KTN1-220ENST00000555172 TSGA10IPQ3SY00 556 aa5.47□□□□□ -1.53
KTN1-220ENST00000555172 TMEM214Q6NUQ4 689 aaKnown RBP5.47□□□□□ -1.53
KTN1-220ENST00000555172 CCDC85AQ96PX6 553 aaPredicted RBP5.47□□□□□ -1.53
KTN1-220ENST00000555172 FHDC1Q9C0D6 1143 aaPredicted RBP5.47□□□□□ -1.53
KTN1-220ENST00000555172 PRDM16Q9HAZ2 1276 aa5.47□□□□□ -1.53
KTN1-220ENST00000555172 HRH3Q9Y5N1 445 aa5.47□□□□□ -1.53
KTN1-220ENST00000555172 COBLO75128 1261 aa5.47□□□□□ -1.53
KTN1-220ENST00000555172 ATP2B4P23634 1241 aa5.47□□□□□ -1.53
KTN1-220ENST00000555172 SCNN1AP37088 669 aa5.47□□□□□ -1.53
KTN1-220ENST00000555172 GTF2IP78347 998 aa5.47□□□□□ -1.53
KTN1-220ENST00000555172 CLDN10P78369 228 aa5.47□□□□□ -1.53
KTN1-220ENST00000555172 PSME1Q06323 249 aa5.47□□□□□ -1.53
KTN1-220ENST00000555172 ARTNQ5T4W7 220 aa5.47□□□□□ -1.53
KTN1-220ENST00000555172 LCE1DQ5T752 114 aa5.47□□□□□ -1.53
KTN1-220ENST00000555172 DPH6Q7L8W6 267 aa5.47□□□□□ -1.53
KTN1-220ENST00000555172 NPAS4Q8IUM7 802 aa5.47□□□□□ -1.53
KTN1-220ENST00000555172 MICAL1Q8TDZ2 1067 aa5.47□□□□□ -1.53
KTN1-220ENST00000555172 PLVAPQ9BX97 442 aa5.47□□□□□ -1.53
KTN1-220ENST00000555172 ANKRD33BA6NCL7 494 aa5.46□□□□□ -1.54
KTN1-220ENST00000555172 SEC13P55735 322 aa5.46□□□□□ -1.54
KTN1-220ENST00000555172 FAM69CQ0P6D2 419 aa5.46□□□□□ -1.54
KTN1-220ENST00000555172 EFHC2Q5JST6 749 aa5.46□□□□□ -1.54
KTN1-220ENST00000555172 SIX5Q8N196 739 aa5.46□□□□□ -1.54
KTN1-220ENST00000555172 ESF1Q9H501 851 aaKnown RBP5.46□□□□□ -1.54
KTN1-220ENST00000555172 TPSG1Q9NRR2 321 aa5.46□□□□□ -1.54
KTN1-220ENST00000555172 NOP53Q9NZM5 478 aaKnown RBP5.46□□□□□ -1.54
KTN1-220ENST00000555172 RAB11FIP3O75154 756 aa5.46□□□□□ -1.54
KTN1-220ENST00000555172 GNASQ5JWF2 1037 aa5.46□□□□□ -1.54
KTN1-220ENST00000555172 NKAPLQ5M9Q1 402 aa5.46□□□□□ -1.54
KTN1-220ENST00000555172 FCHSD1Q86WN1 690 aa5.46□□□□□ -1.54
KTN1-220ENST00000555172 TICAM2Q86XR7 235 aa5.46□□□□□ -1.54
KTN1-220ENST00000555172 TRIM52Q96A61 297 aa5.46□□□□□ -1.54
KTN1-220ENST00000555172 DNAJC2Q99543 621 aaKnown RBP5.46□□□□□ -1.54
KTN1-220ENST00000555172 ZCCHC2Q9C0B9 1178 aaKnown RBP5.46□□□□□ -1.54
KTN1-220ENST00000555172 SLAIN2Q9P270 581 aa5.46□□□□□ -1.54
KTN1-220ENST00000555172 GNRH1P01148 92 aa5.45□□□□□ -1.54
KTN1-220ENST00000555172 ARAFP10398 606 aa5.45□□□□□ -1.54
KTN1-220ENST00000555172 ERCC3P19447 782 aa5.45□□□□□ -1.54
KTN1-220ENST00000555172 CCDC102BQ68D86 513 aa5.45□□□□□ -1.54
KTN1-220ENST00000555172 XAGE2Q96GT9 111 aa5.45□□□□□ -1.54
KTN1-220ENST00000555172 SOWAHDA6NJG2 315 aa5.44□□□□□ -1.54
KTN1-220ENST00000555172 MYCP01106 439 aaPredicted RBP5.44□□□□□ -1.54
KTN1-220ENST00000555172 CD33P20138 364 aa5.44□□□□□ -1.54
KTN1-220ENST00000555172 PCBP4P57723 403 aaKnown RBP5.44□□□□□ -1.54
KTN1-220ENST00000555172 SF3A1Q15459 793 aaKnown RBP5.44□□□□□ -1.54
KTN1-220ENST00000555172 TSNAXIP1Q2TAA8 658 aa5.44□□□□□ -1.54
KTN1-220ENST00000555172 C9orf131Q5VYM1 1079 aa5.44□□□□□ -1.54
KTN1-220ENST00000555172 TPCN2Q8NHX9 752 aa5.44□□□□□ -1.54
KTN1-220ENST00000555172 GPATCH3Q96I76 525 aa5.44□□□□□ -1.54
KTN1-220ENST00000555172 DCDC2BA2VCK2 349 aa5.44□□□□□ -1.54
KTN1-220ENST00000555172 ZBTB7BO15156 539 aaPredicted RBP5.44□□□□□ -1.54
KTN1-220ENST00000555172 LBRQ14739 615 aaKnown RBP5.44□□□□□ -1.54
KTN1-220ENST00000555172 LOC102724159A0A0B4J2E5 919 aa5.43□□□□□ -1.54
KTN1-220ENST00000555172 FAM229AH3BQW9 127 aa5.43□□□□□ -1.54
KTN1-220ENST00000555172 PWP2Q15269 919 aaKnown RBP5.43□□□□□ -1.54
KTN1-220ENST00000555172 BCCIPQ9P287 314 aaKnown RBP eCLIP5.43□□□□□ -1.54
KTN1-220ENST00000555172 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.43□□□□□ -1.54
KTN1-220ENST00000555172 KIAA1024Q9UPX6 916 aa5.43□□□□□ -1.54
KTN1-220ENST00000555172 RIPOR2Q9Y4F9 1068 aa5.43□□□□□ -1.54
KTN1-220ENST00000555172 PPME1Q9Y570 386 aa5.43□□□□□ -1.54
KTN1-220ENST00000555172 PRMT3O60678 531 aa5.42□□□□□ -1.54
KTN1-220ENST00000555172 YBX3P16989 372 aaKnown RBP eCLIP5.42□□□□□ -1.54
KTN1-220ENST00000555172 PLA2G4AP47712 749 aa5.42□□□□□ -1.54
KTN1-220ENST00000555172 C1orf216Q8TAB5 229 aa5.42□□□□□ -1.54
KTN1-220ENST00000555172 HINFPQ9BQA5 517 aa5.42□□□□□ -1.54
KTN1-220ENST00000555172 CRISPLD1Q9H336 500 aa5.42□□□□□ -1.54
KTN1-220ENST00000555172 BIN2Q9UBW5 565 aaPredicted RBP5.42□□□□□ -1.54
KTN1-220ENST00000555172 PCDHGA11Q9Y5H2 935 aa5.42□□□□□ -1.54
KTN1-220ENST00000555172 SFI1A8K8P3 1242 aa5.42□□□□□ -1.54
KTN1-220ENST00000555172 DYRK3O43781 588 aa5.42□□□□□ -1.54
KTN1-220ENST00000555172 DKK1O94907 266 aa5.42□□□□□ -1.54
KTN1-220ENST00000555172 ERCC5P28715 1186 aaPredicted RBP5.42□□□□□ -1.54
KTN1-220ENST00000555172 PRSS36Q5K4E3 855 aa5.42□□□□□ -1.54
KTN1-220ENST00000555172 SLC52A1Q9NWF4 448 aa5.42□□□□□ -1.54
KTN1-220ENST00000555172 PCDHGC4Q9Y5F7 938 aa5.42□□□□□ -1.54
KTN1-220ENST00000555172 SPATA31C1P0DKV0 1188 aa5.41□□□□□ -1.54
KTN1-220ENST00000555172 MAPTP10636 758 aaKnown RBP5.41□□□□□ -1.54
KTN1-220ENST00000555172 ADH6P28332 368 aa5.41□□□□□ -1.54
KTN1-220ENST00000555172 GTF2E1P29083 439 aaPredicted RBP5.41□□□□□ -1.54
KTN1-220ENST00000555172 AIDAQ96BJ3 306 aa5.41□□□□□ -1.54
KTN1-220ENST00000555172 KLHL42Q9P2K6 505 aa5.41□□□□□ -1.54
KTN1-220ENST00000555172 SUGT1Q9Y2Z0 365 aa5.41□□□□□ -1.54
KTN1-220ENST00000555172 ATXN7O15265 892 aaPredicted RBP5.4□□□□□ -1.54
KTN1-220ENST00000555172 ATP4AP20648 1035 aa5.4□□□□□ -1.54
KTN1-220ENST00000555172 VAMP1P23763 118 aa5.4□□□□□ -1.54
KTN1-220ENST00000555172 ZNF326Q5BKZ1 582 aaKnown RBP5.4□□□□□ -1.54
KTN1-220ENST00000555172 FBXO33Q7Z6M2 555 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms