RNA–Protein interactions for RNA: ENST00000554974.5

XRCC3-210, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4 BASIC

Gene XRCC3, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-210ENST00000554974 LTBP1Q14766 1721 aa19.9■□□□□ 0.78
XRCC3-210ENST00000554974 FZD9O00144 591 aa19.89■□□□□ 0.77
XRCC3-210ENST00000554974 ITGBL1O95965 494 aaPredicted RBP19.89■□□□□ 0.77
XRCC3-210ENST00000554974 RPGRQ92834 1020 aaKnown RBP19.89■□□□□ 0.77
XRCC3-210ENST00000554974 CLEC11AQ9Y240 323 aa19.89■□□□□ 0.77
XRCC3-210ENST00000554974 MAPK8IP3Q9UPT6 1336 aa19.88■□□□□ 0.77
XRCC3-210ENST00000554974 SUSD4Q5VX71 490 aa19.88■□□□□ 0.77
XRCC3-210ENST00000554974 C3orf67Q6ZVT6 689 aa19.88■□□□□ 0.77
XRCC3-210ENST00000554974 PSMD1Q99460 953 aa19.88■□□□□ 0.77
XRCC3-210ENST00000554974 MAP1SQ66K74 1059 aaPredicted RBP19.87■□□□□ 0.77
XRCC3-210ENST00000554974 GPC2Q8N158 579 aa19.87■□□□□ 0.77
XRCC3-210ENST00000554974 ANKRD36CQ5JPF3 1778 aa19.86■□□□□ 0.77
XRCC3-210ENST00000554974 TMEM88BA6NKF7 163 aa19.86■□□□□ 0.77
XRCC3-210ENST00000554974 TCERG1O14776 1098 aaKnown RBP19.86■□□□□ 0.77
XRCC3-210ENST00000554974 NTSR2O95665 410 aa19.86■□□□□ 0.77
XRCC3-210ENST00000554974 HOXA10P31260 410 aaPredicted RBP19.86■□□□□ 0.77
XRCC3-210ENST00000554974 JDP2Q8WYK2 163 aa19.86■□□□□ 0.77
XRCC3-210ENST00000554974 GJA3Q9Y6H8 435 aa19.86■□□□□ 0.77
XRCC3-210ENST00000554974 LAMB2P55268 1798 aa19.85■□□□□ 0.77
XRCC3-210ENST00000554974 PPEF1O14829 653 aaPredicted RBP19.85■□□□□ 0.77
XRCC3-210ENST00000554974 FOXN1O15353 648 aa19.85■□□□□ 0.77
XRCC3-210ENST00000554974 VEGFBP49765 207 aa19.85■□□□□ 0.77
XRCC3-210ENST00000554974 ZNF34Q8IZ26 560 aa19.85■□□□□ 0.77
XRCC3-210ENST00000554974 TSPYL4Q9UJ04 414 aa19.85■□□□□ 0.77
XRCC3-210ENST00000554974 PNMA8AQ86V59 439 aaPredicted RBP19.84■□□□□ 0.77
XRCC3-210ENST00000554974 ERBB4Q15303 1308 aa19.83■□□□□ 0.77
XRCC3-210ENST00000554974 ANXA1P04083 346 aa19.83■□□□□ 0.77
XRCC3-210ENST00000554974 PROSER3Q2NL68 480 aa19.83■□□□□ 0.77
XRCC3-210ENST00000554974 CC2D2BQ6DHV5 1058 aa19.83■□□□□ 0.77
XRCC3-210ENST00000554974 GIGYF2Q6Y7W6 1299 aaKnown RBP19.83■□□□□ 0.77
XRCC3-210ENST00000554974 LRP10Q7Z4F1 713 aa19.83■□□□□ 0.77
XRCC3-210ENST00000554974 CNTROBQ8N137 903 aa19.83■□□□□ 0.77
XRCC3-210ENST00000554974 LARGE2Q8N3Y3 721 aa19.83■□□□□ 0.77
XRCC3-210ENST00000554974 EIF2S2P20042 333 aaKnown RBP19.82■□□□□ 0.76
XRCC3-210ENST00000554974 EIF6P56537 245 aaKnown RBP19.82■□□□□ 0.76
XRCC3-210ENST00000554974 RBM17Q96I25 401 aaKnown RBP19.82■□□□□ 0.76
XRCC3-210ENST00000554974 CRAMP1Q96RY5 1269 aa19.82■□□□□ 0.76
XRCC3-210ENST00000554974 SCNN1DP51172 638 aa19.81■□□□□ 0.76
XRCC3-210ENST00000554974 PDIA6Q15084 440 aa19.81■□□□□ 0.76
XRCC3-210ENST00000554974 PPP1R42Q7Z4L9 355 aa19.8■□□□□ 0.76
XRCC3-210ENST00000554974 PNNQ9H307 717 aaKnown RBP19.8■□□□□ 0.76
XRCC3-210ENST00000554974 LMOD1P29536 600 aaPredicted RBP19.79■□□□□ 0.76
XRCC3-210ENST00000554974 EPS15P42566 896 aa19.79■□□□□ 0.76
XRCC3-210ENST00000554974 RIPK4P57078 832 aa19.79■□□□□ 0.76
XRCC3-210ENST00000554974 PARP10Q53GL7 1025 aa19.79■□□□□ 0.76
XRCC3-210ENST00000554974 NECTIN2Q92692 538 aa19.79■□□□□ 0.76
XRCC3-210ENST00000554974 AIDAQ96BJ3 306 aa19.79■□□□□ 0.76
XRCC3-210ENST00000554974 ABCC4O15439 1325 aa19.78■□□□□ 0.76
XRCC3-210ENST00000554974 RASSF10A6NK89 507 aa19.78■□□□□ 0.76
XRCC3-210ENST00000554974 PPIP5K2O43314 1243 aa19.78■□□□□ 0.76
XRCC3-210ENST00000554974 FMR1Q06787 632 aaKnown RBP eCLIP19.78■□□□□ 0.76
XRCC3-210ENST00000554974 AOC3Q16853 763 aa19.78■□□□□ 0.76
XRCC3-210ENST00000554974 NIM1KQ8IY84 436 aa19.78■□□□□ 0.76
XRCC3-210ENST00000554974 NLRP3Q96P20 1036 aa19.78■□□□□ 0.76
XRCC3-210ENST00000554974 UTP14AQ9BVJ6 771 aaKnown RBP19.78■□□□□ 0.76
XRCC3-210ENST00000554974 ABT1Q9ULW3 272 aaKnown RBP19.78■□□□□ 0.76
XRCC3-210ENST00000554974 TAF1P21675 1872 aa19.77■□□□□ 0.76
XRCC3-210ENST00000554974 THSD7BQ9C0I4 1608 aa19.77■□□□□ 0.76
XRCC3-210ENST00000554974 GRIPAP1Q4V328 841 aa19.77■□□□□ 0.76
XRCC3-210ENST00000554974 TRPM7Q96QT4 1865 aa19.76■□□□□ 0.75
XRCC3-210ENST00000554974 DDX21Q9NR30 783 aaKnown RBP eCLIP19.76■□□□□ 0.75
XRCC3-210ENST00000554974 WBP1LQ9NX94 342 aa19.76■□□□□ 0.75
XRCC3-210ENST00000554974 ATP6V0A2Q9Y487 856 aa19.76■□□□□ 0.75
XRCC3-210ENST00000554974 TMPOP42166 694 aaKnown RBP19.75■□□□□ 0.75
XRCC3-210ENST00000554974 CTCFP49711 727 aaPredicted RBP19.75■□□□□ 0.75
XRCC3-210ENST00000554974 AIMP1Q12904 312 aaKnown RBP19.75■□□□□ 0.75
XRCC3-210ENST00000554974 KRT24Q2M2I5 525 aa19.75■□□□□ 0.75
XRCC3-210ENST00000554974 DEFB115Q30KQ5 88 aa19.75■□□□□ 0.75
XRCC3-210ENST00000554974 COPS6Q7L5N1 327 aa19.75■□□□□ 0.75
XRCC3-210ENST00000554974 XAGE3Q8WTP9 111 aa19.75■□□□□ 0.75
XRCC3-210ENST00000554974 ZNF428Q96B54 188 aa19.75■□□□□ 0.75
XRCC3-210ENST00000554974 PRDM10Q9NQV6 1147 aa19.75■□□□□ 0.75
XRCC3-210ENST00000554974 DDX60Q8IY21 1712 aaKnown RBP19.74■□□□□ 0.75
XRCC3-210ENST00000554974 TRAF5O00463 557 aa19.74■□□□□ 0.75
XRCC3-210ENST00000554974 HCLS1P14317 486 aaPredicted RBP19.74■□□□□ 0.75
XRCC3-210ENST00000554974 LBX1P52954 281 aa19.74■□□□□ 0.75
XRCC3-210ENST00000554974 SLC10A5Q5PT55 438 aa19.74■□□□□ 0.75
XRCC3-210ENST00000554974 CCDC146Q8IYE0 955 aa19.74■□□□□ 0.75
XRCC3-210ENST00000554974 WDR33Q9C0J8 1336 aaKnown RBP19.74■□□□□ 0.75
XRCC3-210ENST00000554974 NLRP10Q86W26 655 aa19.73■□□□□ 0.75
XRCC3-210ENST00000554974 TMX4Q9H1E5 349 aaPredicted RBP19.73■□□□□ 0.75
XRCC3-210ENST00000554974 DUOX1Q9NRD9 1551 aa19.73■□□□□ 0.75
XRCC3-210ENST00000554974 LRRC37AA6NMS7 1700 aa19.73■□□□□ 0.75
XRCC3-210ENST00000554974 LMOD3Q0VAK6 560 aa19.72■□□□□ 0.75
XRCC3-210ENST00000554974 NEUROD2Q15784 382 aa19.72■□□□□ 0.75
XRCC3-210ENST00000554974 PAXIP1Q6ZW49 1069 aaPredicted RBP19.72■□□□□ 0.75
XRCC3-210ENST00000554974 USP50Q70EL3 339 aaPredicted RBP19.72■□□□□ 0.75
XRCC3-210ENST00000554974 BABAM1Q9NWV8 329 aa19.72■□□□□ 0.75
XRCC3-210ENST00000554974 GPRC5DQ9NZD1 345 aa19.72■□□□□ 0.75
XRCC3-210ENST00000554974 CXCL9Q07325 125 aa19.71■□□□□ 0.75
XRCC3-210ENST00000554974 GRM1Q13255 1194 aa19.71■□□□□ 0.75
XRCC3-210ENST00000554974 HSP90AB3PQ58FF7 597 aa19.71■□□□□ 0.75
XRCC3-210ENST00000554974 DPP8Q6V1X1 898 aaPredicted RBP19.71■□□□□ 0.75
XRCC3-210ENST00000554974 RTFDC1Q9BY42 306 aaPredicted RBP19.71■□□□□ 0.75
XRCC3-210ENST00000554974 ZNRF3Q9ULT6 936 aa19.71■□□□□ 0.75
XRCC3-210ENST00000554974 ZNF316A6NFI3 1004 aaPredicted RBP19.7■□□□□ 0.74
XRCC3-210ENST00000554974 HSPA8P11142 646 aaKnown RBP19.7■□□□□ 0.74
XRCC3-210ENST00000554974 GMPSP49915 693 aaPredicted RBP19.7■□□□□ 0.74
XRCC3-210ENST00000554974 RALBP1Q15311 655 aa19.7■□□□□ 0.74
XRCC3-210ENST00000554974 CHPF2Q9P2E5 772 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms